RNA–Protein interactions for RNA: ENST00000636440.1

CHRNA7-215, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 875 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-215ENST00000636440 CFAP53Q96M91 514 aa22.76■■□□□ 1.23
CHRNA7-215ENST00000636440 SCN11AQ9UI33 1791 aa22.74■■□□□ 1.23
CHRNA7-215ENST00000636440 ATP6V1AP38606 617 aa22.74■■□□□ 1.23
CHRNA7-215ENST00000636440 LINC00116Q8NCU8 138 aa22.74■■□□□ 1.23
CHRNA7-215ENST00000636440 MRC1P22897 1456 aa22.73■■□□□ 1.23
CHRNA7-215ENST00000636440 SSFA2P28290 1259 aa22.73■■□□□ 1.23
CHRNA7-215ENST00000636440 PPP2R1AP30153 589 aa22.73■■□□□ 1.23
CHRNA7-215ENST00000636440 ITPK1Q13572 414 aa22.73■■□□□ 1.23
CHRNA7-215ENST00000636440 CNGB1Q14028 1251 aaPredicted RBP22.73■■□□□ 1.23
CHRNA7-215ENST00000636440 FHDC1Q9C0D6 1143 aaPredicted RBP22.73■■□□□ 1.23
CHRNA7-215ENST00000636440 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
CHRNA7-215ENST00000636440 UBR3Q6ZT12 1888 aa22.72■■□□□ 1.23
CHRNA7-215ENST00000636440 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
CHRNA7-215ENST00000636440 DCAF8L1A6NGE4 600 aa22.71■■□□□ 1.23
CHRNA7-215ENST00000636440 MTHFSDQ2M296 383 aaKnown RBP22.71■■□□□ 1.23
CHRNA7-215ENST00000636440 NFATC2IPQ8NCF5 419 aa22.71■■□□□ 1.23
CHRNA7-215ENST00000636440 U2SURPO15042 1029 aaKnown RBP22.7■■□□□ 1.22
CHRNA7-215ENST00000636440 MSH5O43196 834 aa22.7■■□□□ 1.22
CHRNA7-215ENST00000636440 SLC52A2Q9HAB3 445 aa22.69■■□□□ 1.22
CHRNA7-215ENST00000636440 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
CHRNA7-215ENST00000636440 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
CHRNA7-215ENST00000636440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.68■■□□□ 1.22
CHRNA7-215ENST00000636440 RNMTO43148 476 aaKnown RBP22.68■■□□□ 1.22
CHRNA7-215ENST00000636440 RC3H1Q5TC82 1133 aaKnown RBP22.68■■□□□ 1.22
CHRNA7-215ENST00000636440 GAS2L2Q8NHY3 880 aa22.68■■□□□ 1.22
CHRNA7-215ENST00000636440 SLC4A9Q96Q91 983 aa22.68■■□□□ 1.22
CHRNA7-215ENST00000636440 CNTNAP4Q9C0A0 1308 aa22.67■■□□□ 1.22
CHRNA7-215ENST00000636440 AMIGO3Q86WK7 504 aa22.67■■□□□ 1.22
CHRNA7-215ENST00000636440 RBM42Q9BTD8 480 aaKnown RBP22.67■■□□□ 1.22
CHRNA7-215ENST00000636440 COL5A3P25940 1745 aaPredicted RBP22.67■■□□□ 1.22
CHRNA7-215ENST00000636440 LGR6Q9HBX8 967 aa22.66■■□□□ 1.22
CHRNA7-215ENST00000636440 GNPATO15228 680 aa22.65■■□□□ 1.22
CHRNA7-215ENST00000636440 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
CHRNA7-215ENST00000636440 ADRA2BP18089 450 aa22.64■■□□□ 1.21
CHRNA7-215ENST00000636440 PHF14O94880 888 aa22.63■■□□□ 1.21
CHRNA7-215ENST00000636440 GNAT3A8MTJ3 354 aa22.62■■□□□ 1.21
CHRNA7-215ENST00000636440 PTCD1O75127 700 aaKnown RBP22.62■■□□□ 1.21
CHRNA7-215ENST00000636440 FCHSD2O94868 740 aa22.62■■□□□ 1.21
CHRNA7-215ENST00000636440 RTCBQ9Y3I0 505 aaKnown RBP22.62■■□□□ 1.21
CHRNA7-215ENST00000636440 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
CHRNA7-215ENST00000636440 PRKAR2BP31323 418 aa22.61■■□□□ 1.21
CHRNA7-215ENST00000636440 MSL1Q68DK7 614 aa22.61■■□□□ 1.21
CHRNA7-215ENST00000636440 U2AF1L5P0DN76 240 aaPredicted RBP22.6■■□□□ 1.21
CHRNA7-215ENST00000636440 U2AF1Q01081 240 aaKnown RBP eCLIP22.6■■□□□ 1.21
CHRNA7-215ENST00000636440 TRAPPC3LQ5T215 181 aa22.6■■□□□ 1.21
CHRNA7-215ENST00000636440 RPS6KA4O75676 772 aa22.59■■□□□ 1.21
CHRNA7-215ENST00000636440 TJP1Q07157 1748 aa22.59■■□□□ 1.21
CHRNA7-215ENST00000636440 KCPQ6ZWJ8 1503 aa22.58■■□□□ 1.21
CHRNA7-215ENST00000636440 VSIG10Q8N0Z9 540 aa22.58■■□□□ 1.21
CHRNA7-215ENST00000636440 PHACTR3Q96KR7 559 aa22.58■■□□□ 1.21
CHRNA7-215ENST00000636440 CD2APQ9Y5K6 639 aa22.58■■□□□ 1.21
CHRNA7-215ENST00000636440 CEMIPQ8WUJ3 1361 aa22.58■■□□□ 1.21
CHRNA7-215ENST00000636440 RALBP1Q15311 655 aa22.57■■□□□ 1.2
CHRNA7-215ENST00000636440 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
CHRNA7-215ENST00000636440 MYH14Q7Z406 1995 aaKnown RBP22.56■■□□□ 1.2
CHRNA7-215ENST00000636440 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
CHRNA7-215ENST00000636440 SMIM5Q71RC9 77 aa22.56■■□□□ 1.2
CHRNA7-215ENST00000636440 UBR2Q8IWV8 1755 aa22.55■■□□□ 1.2
CHRNA7-215ENST00000636440 TEFQ10587 303 aa22.55■■□□□ 1.2
CHRNA7-215ENST00000636440 SLC39A6Q13433 755 aa22.54■■□□□ 1.2
CHRNA7-215ENST00000636440 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
CHRNA7-215ENST00000636440 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
CHRNA7-215ENST00000636440 ARHGEF1Q92888 912 aaKnown RBP22.54■■□□□ 1.2
CHRNA7-215ENST00000636440 SIPA1L3O60292 1781 aaPredicted RBP22.53■■□□□ 1.2
CHRNA7-215ENST00000636440 RFC4P35249 363 aa22.53■■□□□ 1.2
CHRNA7-215ENST00000636440 UTRNP46939 3433 aa22.52■■□□□ 1.2
CHRNA7-215ENST00000636440 HTATSF1O43719 755 aaKnown RBP22.52■■□□□ 1.2
CHRNA7-215ENST00000636440 INTS5Q6P9B9 1019 aaKnown RBP22.52■■□□□ 1.2
CHRNA7-215ENST00000636440 DNAJC10Q8IXB1 793 aa22.52■■□□□ 1.2
CHRNA7-215ENST00000636440 TTC5Q8N0Z6 440 aa22.52■■□□□ 1.2
CHRNA7-215ENST00000636440 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
CHRNA7-215ENST00000636440 CYP19A1P11511 503 aaPredicted RBP22.51■■□□□ 1.19
CHRNA7-215ENST00000636440 YY1P25490 414 aa22.51■■□□□ 1.19
CHRNA7-215ENST00000636440 CCDC87Q9NVE4 849 aa22.51■■□□□ 1.19
CHRNA7-215ENST00000636440 C4AP0C0L4 1744 aa22.51■■□□□ 1.19
CHRNA7-215ENST00000636440 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
CHRNA7-215ENST00000636440 ZNF790Q6PG37 636 aa22.5■■□□□ 1.19
CHRNA7-215ENST00000636440 MMP10P09238 476 aa22.49■■□□□ 1.19
CHRNA7-215ENST00000636440 GYS1P13807 737 aa22.49■■□□□ 1.19
CHRNA7-215ENST00000636440 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
CHRNA7-215ENST00000636440 GPR162Q16538 588 aa22.49■■□□□ 1.19
CHRNA7-215ENST00000636440 RTF1Q92541 710 aaKnown RBP22.49■■□□□ 1.19
CHRNA7-215ENST00000636440 TEX13AQ9BXU3 409 aaPredicted RBP22.48■■□□□ 1.19
CHRNA7-215ENST00000636440 PNNQ9H307 717 aaKnown RBP22.48■■□□□ 1.19
CHRNA7-215ENST00000636440 SOS1Q07889 1333 aaPredicted RBP22.48■■□□□ 1.19
CHRNA7-215ENST00000636440 USP42Q9H9J4 1324 aaKnown RBP22.48■■□□□ 1.19
CHRNA7-215ENST00000636440 NEFMP07197 916 aa22.47■■□□□ 1.19
CHRNA7-215ENST00000636440 HEG1Q9ULI3 1381 aa22.47■■□□□ 1.19
CHRNA7-215ENST00000636440 STARD3NLO95772 234 aa22.46■■□□□ 1.19
CHRNA7-215ENST00000636440 ZNF496Q96IT1 587 aaPredicted RBP22.46■■□□□ 1.19
CHRNA7-215ENST00000636440 PLEKHF1Q96S99 279 aa22.46■■□□□ 1.19
CHRNA7-215ENST00000636440 BTBD11A6QL63 1104 aa22.45■■□□□ 1.18
CHRNA7-215ENST00000636440 FMNL2Q96PY5 1086 aa22.45■■□□□ 1.18
CHRNA7-215ENST00000636440 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
CHRNA7-215ENST00000636440 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
CHRNA7-215ENST00000636440 GOLGB1Q14789 3259 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-215ENST00000636440 CHD4Q14839 1912 aa22.43■■□□□ 1.18
CHRNA7-215ENST00000636440 KIF13BQ9NQT8 1826 aa22.43■■□□□ 1.18
CHRNA7-215ENST00000636440 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
CHRNA7-215ENST00000636440 COL15A1P39059 1388 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms