RNA–Protein interactions for RNA: ENST00000636245.1

CHRNA7-211, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,794 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-211ENST00000636245 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
CHRNA7-211ENST00000636245 COL22A1Q8NFW1 1626 aaPredicted RBP22.16■■□□□ 1.14
CHRNA7-211ENST00000636245 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
CHRNA7-211ENST00000636245 PHKG2P15735 406 aa22.16■■□□□ 1.14
CHRNA7-211ENST00000636245 RWDD1Q9H446 243 aaPredicted RBP22.16■■□□□ 1.14
CHRNA7-211ENST00000636245 KDM6AO15550 1401 aaPredicted RBP22.15■■□□□ 1.14
CHRNA7-211ENST00000636245 CCDC30Q5VVM6 783 aa22.15■■□□□ 1.14
CHRNA7-211ENST00000636245 INTS3Q68E01 1043 aaKnown RBP22.15■■□□□ 1.14
CHRNA7-211ENST00000636245 TOM1L2Q6ZVM7 507 aa22.14■■□□□ 1.13
CHRNA7-211ENST00000636245 NECTIN2Q92692 538 aa22.14■■□□□ 1.13
CHRNA7-211ENST00000636245 HDAC1Q13547 482 aaPredicted RBP22.13■■□□□ 1.13
CHRNA7-211ENST00000636245 CYP27B1O15528 508 aa22.12■■□□□ 1.13
CHRNA7-211ENST00000636245 IFNL2Q8IZJ0 200 aa22.12■■□□□ 1.13
CHRNA7-211ENST00000636245 STK31Q9BXU1 1019 aa22.12■■□□□ 1.13
CHRNA7-211ENST00000636245 CARD10Q9BWT7 1032 aa22.11■■□□□ 1.13
CHRNA7-211ENST00000636245 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
CHRNA7-211ENST00000636245 COL16A1Q07092 1604 aaPredicted RBP22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 LARP1Q6PKG0 1096 aaKnown RBP22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 CHMP4BQ9H444 224 aaKnown RBP22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 HEG1Q9ULI3 1381 aa22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 SHANK3Q9BYB0 1731 aa22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 HOXB7P09629 217 aa22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 HDGFL1Q5TGJ6 251 aa22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 STRN4Q9NRL3 753 aa22.1■■□□□ 1.13
CHRNA7-211ENST00000636245 COL14A1Q05707 1796 aaKnown RBP22.09■■□□□ 1.13
CHRNA7-211ENST00000636245 RGS3P49796 1198 aa22.09■■□□□ 1.13
CHRNA7-211ENST00000636245 EVA1CP58658 441 aa22.08■■□□□ 1.13
CHRNA7-211ENST00000636245 C1orf115Q9H7X2 142 aa22.08■■□□□ 1.13
CHRNA7-211ENST00000636245 SLC52A2Q9HAB3 445 aa22.08■■□□□ 1.13
CHRNA7-211ENST00000636245 PDZRN3Q9UPQ7 1066 aa22.08■■□□□ 1.13
CHRNA7-211ENST00000636245 PDE4AP27815 886 aa22.07■■□□□ 1.12
CHRNA7-211ENST00000636245 FLIIQ13045 1269 aa22.07■■□□□ 1.12
CHRNA7-211ENST00000636245 MRC1P22897 1456 aa22.07■■□□□ 1.12
CHRNA7-211ENST00000636245 F6X3S4 739 aa22.07■■□□□ 1.12
CHRNA7-211ENST00000636245 N4BP2Q86UW6 1770 aaPredicted RBP22.06■■□□□ 1.12
CHRNA7-211ENST00000636245 EIF2S2P20042 333 aaKnown RBP22.06■■□□□ 1.12
CHRNA7-211ENST00000636245 NFATC2IPQ8NCF5 419 aa22.06■■□□□ 1.12
CHRNA7-211ENST00000636245 DCAF5Q96JK2 942 aa22.06■■□□□ 1.12
CHRNA7-211ENST00000636245 ZCRB1Q8TBF4 217 aaKnown RBP22.05■■□□□ 1.12
CHRNA7-211ENST00000636245 BACH2Q9BYV9 841 aa22.05■■□□□ 1.12
CHRNA7-211ENST00000636245 BTG4Q9NY30 223 aa22.05■■□□□ 1.12
CHRNA7-211ENST00000636245 GIGYF1O75420 1035 aaPredicted RBP22.04■■□□□ 1.12
CHRNA7-211ENST00000636245 SMC5Q8IY18 1101 aa22.04■■□□□ 1.12
CHRNA7-211ENST00000636245 IL2RBP14784 551 aa22.04■■□□□ 1.12
CHRNA7-211ENST00000636245 SIRT2Q8IXJ6 389 aa22.04■■□□□ 1.12
CHRNA7-211ENST00000636245 PHAXQ9H814 394 aaKnown RBP22.04■■□□□ 1.12
CHRNA7-211ENST00000636245 C5P01031 1676 aa22.04■■□□□ 1.12
CHRNA7-211ENST00000636245 HSP90AB1P08238 724 aaKnown RBP22.03■■□□□ 1.12
CHRNA7-211ENST00000636245 SLC39A6Q13433 755 aa22.03■■□□□ 1.12
CHRNA7-211ENST00000636245 PRAMEF22A3QJZ6 481 aa22.02■■□□□ 1.12
CHRNA7-211ENST00000636245 FKBP5Q13451 457 aaPredicted RBP22.02■■□□□ 1.12
CHRNA7-211ENST00000636245 ZNF790Q6PG37 636 aa22.02■■□□□ 1.12
CHRNA7-211ENST00000636245 CHPF2Q9P2E5 772 aa22.02■■□□□ 1.12
CHRNA7-211ENST00000636245 CCT4P50991 539 aaKnown RBP22.02■■□□□ 1.11
CHRNA7-211ENST00000636245 SLC4A10Q6U841 1118 aa22.02■■□□□ 1.11
CHRNA7-211ENST00000636245 PCDH11XQ9BZA7 1347 aa22.01■■□□□ 1.11
CHRNA7-211ENST00000636245 PCDH11YQ9BZA8 1340 aa22.01■■□□□ 1.11
CHRNA7-211ENST00000636245 MEIS3Q99687 375 aa22■■□□□ 1.11
CHRNA7-211ENST00000636245 TOM1O60784 492 aa21.99■■□□□ 1.11
CHRNA7-211ENST00000636245 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
CHRNA7-211ENST00000636245 PLCH1Q4KWH8 1693 aa21.99■■□□□ 1.11
CHRNA7-211ENST00000636245 PIP4K2BP78356 416 aa21.99■■□□□ 1.11
CHRNA7-211ENST00000636245 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
CHRNA7-211ENST00000636245 ANXA1P04083 346 aa21.98■■□□□ 1.11
CHRNA7-211ENST00000636245 NKX1-1Q15270 411 aaPredicted RBP21.98■■□□□ 1.11
CHRNA7-211ENST00000636245 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
CHRNA7-211ENST00000636245 CABP4P57796 275 aa21.97■■□□□ 1.11
CHRNA7-211ENST00000636245 USP35Q9P2H5 1018 aa21.97■■□□□ 1.11
CHRNA7-211ENST00000636245 DBF4Q9UBU7 674 aaPredicted RBP21.97■■□□□ 1.11
CHRNA7-211ENST00000636245 C8orf34Q49A92 452 aa21.96■■□□□ 1.11
CHRNA7-211ENST00000636245 ZNF496Q96IT1 587 aaPredicted RBP21.96■■□□□ 1.11
CHRNA7-211ENST00000636245 TOGARAM1Q9Y4F4 1720 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 NUCB1Q02818 461 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 PROSER3Q2NL68 480 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 DDX54Q8TDD1 881 aaKnown RBP21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 GLI3P10071 1580 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 WNK3Q9BYP7 1800 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 NRAPQ86VF7 1730 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 DISP2A7MBM2 1401 aa21.95■■□□□ 1.1
CHRNA7-211ENST00000636245 FAM161AQ3B820 660 aa21.94■■□□□ 1.1
CHRNA7-211ENST00000636245 CEP85Q6P2H3 762 aa21.94■■□□□ 1.1
CHRNA7-211ENST00000636245 UBR2Q8IWV8 1755 aa21.93■■□□□ 1.1
CHRNA7-211ENST00000636245 ERVV-2B6SEH9 535 aa21.93■■□□□ 1.1
CHRNA7-211ENST00000636245 PDIA6Q15084 440 aa21.93■■□□□ 1.1
CHRNA7-211ENST00000636245 RPAP2Q8IXW5 612 aaPredicted RBP21.93■■□□□ 1.1
CHRNA7-211ENST00000636245 GCC1Q96CN9 775 aa21.93■■□□□ 1.1
CHRNA7-211ENST00000636245 PAPPAQ13219 1627 aa21.93■■□□□ 1.1
CHRNA7-211ENST00000636245 ADAMTS2O95450 1211 aa21.92■■□□□ 1.1
CHRNA7-211ENST00000636245 ADCY9O60503 1353 aa21.92■■□□□ 1.1
CHRNA7-211ENST00000636245 UBAP1LF5GYI3 381 aa21.92■■□□□ 1.1
CHRNA7-211ENST00000636245 PI4KAP2A4QPH2 592 aa21.91■■□□□ 1.1
CHRNA7-211ENST00000636245 TTC5Q8N0Z6 440 aa21.91■■□□□ 1.1
CHRNA7-211ENST00000636245 PI4KAP1Q8N8J0 262 aa21.91■■□□□ 1.1
CHRNA7-211ENST00000636245 DDX21Q9NR30 783 aaKnown RBP eCLIP21.91■■□□□ 1.1
CHRNA7-211ENST00000636245 LAMB4A4D0S4 1761 aa21.9■■□□□ 1.1
CHRNA7-211ENST00000636245 CHD1LQ86WJ1 897 aa21.9■■□□□ 1.1
CHRNA7-211ENST00000636245 FMNL2Q96PY5 1086 aa21.9■■□□□ 1.1
CHRNA7-211ENST00000636245 DNAAF4Q8WXU2 420 aa21.89■■□□□ 1.1
CHRNA7-211ENST00000636245 USP44Q9H0E7 712 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms