RNA–Protein interactions for RNA: ENST00000636197.1

ATP1A3-210, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 5

Gene ATP1A3, Length 169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-210ENST00000636197 ATP10DQ9P241 1426 aa17.23■□□□□ 0.35
ATP1A3-210ENST00000636197 BRCA1P38398 1863 aaKnown RBP17.23■□□□□ 0.35
ATP1A3-210ENST00000636197 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
ATP1A3-210ENST00000636197 GRIN3BO60391 1043 aa17.23■□□□□ 0.35
ATP1A3-210ENST00000636197 PHF14O94880 888 aa17.23■□□□□ 0.35
ATP1A3-210ENST00000636197 N4BP2Q86UW6 1770 aaPredicted RBP17.23■□□□□ 0.35
ATP1A3-210ENST00000636197 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
ATP1A3-210ENST00000636197 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
ATP1A3-210ENST00000636197 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
ATP1A3-210ENST00000636197 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.35
ATP1A3-210ENST00000636197 TJP1Q07157 1748 aa17.21■□□□□ 0.35
ATP1A3-210ENST00000636197 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
ATP1A3-210ENST00000636197 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
ATP1A3-210ENST00000636197 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
ATP1A3-210ENST00000636197 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
ATP1A3-210ENST00000636197 GNPATO15228 680 aa17.19■□□□□ 0.34
ATP1A3-210ENST00000636197 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
ATP1A3-210ENST00000636197 HMGB2P26583 209 aaKnown RBP17.18■□□□□ 0.34
ATP1A3-210ENST00000636197 ATP6V1AP38606 617 aa17.18■□□□□ 0.34
ATP1A3-210ENST00000636197 PANK3Q9H999 370 aa17.18■□□□□ 0.34
ATP1A3-210ENST00000636197 PCNTO95613 3336 aa17.18■□□□□ 0.34
ATP1A3-210ENST00000636197 C10orf71Q711Q0 1435 aa17.17■□□□□ 0.34
ATP1A3-210ENST00000636197 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
ATP1A3-210ENST00000636197 WWC3Q9ULE0 1092 aa17.17■□□□□ 0.34
ATP1A3-210ENST00000636197 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
ATP1A3-210ENST00000636197 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
ATP1A3-210ENST00000636197 MMP10P09238 476 aa17.15■□□□□ 0.34
ATP1A3-210ENST00000636197 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
ATP1A3-210ENST00000636197 CNTNAP4Q9C0A0 1308 aa17.14■□□□□ 0.33
ATP1A3-210ENST00000636197 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.33
ATP1A3-210ENST00000636197 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
ATP1A3-210ENST00000636197 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
ATP1A3-210ENST00000636197 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
ATP1A3-210ENST00000636197 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
ATP1A3-210ENST00000636197 GYS1P13807 737 aa17.11■□□□□ 0.33
ATP1A3-210ENST00000636197 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
ATP1A3-210ENST00000636197 MRC1P22897 1456 aa17.11■□□□□ 0.33
ATP1A3-210ENST00000636197 IL13P35225 146 aa17.1■□□□□ 0.33
ATP1A3-210ENST00000636197 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
ATP1A3-210ENST00000636197 RTCBQ9Y3I0 505 aaKnown RBP17.1■□□□□ 0.33
ATP1A3-210ENST00000636197 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
ATP1A3-210ENST00000636197 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
ATP1A3-210ENST00000636197 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
ATP1A3-210ENST00000636197 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
ATP1A3-210ENST00000636197 ADRA2BP18089 450 aa17.08■□□□□ 0.32
ATP1A3-210ENST00000636197 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
ATP1A3-210ENST00000636197 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
ATP1A3-210ENST00000636197 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
ATP1A3-210ENST00000636197 GPBP1L1Q9HC44 474 aaPredicted RBP17.08■□□□□ 0.32
ATP1A3-210ENST00000636197 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
ATP1A3-210ENST00000636197 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
ATP1A3-210ENST00000636197 KCNA3P22001 575 aa17.07■□□□□ 0.32
ATP1A3-210ENST00000636197 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
ATP1A3-210ENST00000636197 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
ATP1A3-210ENST00000636197 AFDNP55196 1824 aaKnown RBP17.06■□□□□ 0.32
ATP1A3-210ENST00000636197 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
ATP1A3-210ENST00000636197 KIF3CO14782 793 aa17.06■□□□□ 0.32
ATP1A3-210ENST00000636197 CABP4P57796 275 aa17.06■□□□□ 0.32
ATP1A3-210ENST00000636197 NLGN1Q8N2Q7 840 aa17.06■□□□□ 0.32
ATP1A3-210ENST00000636197 NFATC2IPQ8NCF5 419 aa17.06■□□□□ 0.32
ATP1A3-210ENST00000636197 NRXN2Q9P2S2 1712 aa17.05■□□□□ 0.32
ATP1A3-210ENST00000636197 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
ATP1A3-210ENST00000636197 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
ATP1A3-210ENST00000636197 MTHFSP49914 203 aa17.05■□□□□ 0.32
ATP1A3-210ENST00000636197 TGFB2P61812 414 aa17.05■□□□□ 0.32
ATP1A3-210ENST00000636197 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
ATP1A3-210ENST00000636197 USP42Q9H9J4 1324 aaKnown RBP17.04■□□□□ 0.32
ATP1A3-210ENST00000636197 SBF1O95248 1867 aa17.04■□□□□ 0.32
ATP1A3-210ENST00000636197 DPEP1P16444 411 aa17.04■□□□□ 0.32
ATP1A3-210ENST00000636197 DDR1Q08345 913 aa17.04■□□□□ 0.32
ATP1A3-210ENST00000636197 INTS5Q6P9B9 1019 aaKnown RBP17.04■□□□□ 0.32
ATP1A3-210ENST00000636197 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
ATP1A3-210ENST00000636197 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
ATP1A3-210ENST00000636197 FKBP8Q14318 412 aa17.03■□□□□ 0.32
ATP1A3-210ENST00000636197 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.32
ATP1A3-210ENST00000636197 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.32
ATP1A3-210ENST00000636197 RFC4P35249 363 aa17.02■□□□□ 0.32
ATP1A3-210ENST00000636197 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.32
ATP1A3-210ENST00000636197 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
ATP1A3-210ENST00000636197 HSPA6P17066 643 aa17.01■□□□□ 0.31
ATP1A3-210ENST00000636197 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
ATP1A3-210ENST00000636197 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
ATP1A3-210ENST00000636197 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
ATP1A3-210ENST00000636197 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
ATP1A3-210ENST00000636197 KNSTRNQ9Y448 316 aa17■□□□□ 0.31
ATP1A3-210ENST00000636197 SOS1Q07889 1333 aaPredicted RBP16.99■□□□□ 0.31
ATP1A3-210ENST00000636197 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
ATP1A3-210ENST00000636197 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
ATP1A3-210ENST00000636197 POLRMTO00411 1230 aaKnown RBP16.98■□□□□ 0.31
ATP1A3-210ENST00000636197 TM4SF1P30408 202 aa16.98■□□□□ 0.31
ATP1A3-210ENST00000636197 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
ATP1A3-210ENST00000636197 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
ATP1A3-210ENST00000636197 CYP19A1P11511 503 aaPredicted RBP16.97■□□□□ 0.31
ATP1A3-210ENST00000636197 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
ATP1A3-210ENST00000636197 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
ATP1A3-210ENST00000636197 FCHSD2O94868 740 aa16.96■□□□□ 0.31
ATP1A3-210ENST00000636197 HMOX1P09601 288 aa16.96■□□□□ 0.31
ATP1A3-210ENST00000636197 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
ATP1A3-210ENST00000636197 SCN7AQ01118 1682 aa16.95■□□□□ 0.3
ATP1A3-210ENST00000636197 CHRNA5P30532 468 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms