RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 SH3RF3Q8TEJ3 882 aaPredicted RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 EDARADDQ8WWZ3 215 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 COL26A1Q96A83 441 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 ZG16BQ96DA0 208 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 BBC3Q96PG8 261 aaPredicted RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 KCNC2Q96PR1 638 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 REPIN1Q9BWE0 567 aaKnown RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 INO80BQ9C086 356 aaPredicted RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 KIAA1468Q9P260 1216 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 HCN2Q9UL51 889 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 ANGEL1Q9UNK9 670 aaKnown RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 NSFL1CQ9UNZ2 370 aaKnown RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 WDR33Q9C0J8 1336 aaKnown RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 SLC35F4A4IF30 521 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 SPDYE3A6NKU9 549 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 PHGR1C9JFL3 82 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 RTL8CO15255 209 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 SIAH2O43255 324 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 NUAK1O60285 661 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 CEBPAP49715 358 aaPredicted RBP-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 NRG1Q02297 640 aaPredicted RBP-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 MBTPS1Q14703 1052 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 KCNA10Q16322 511 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 SPRED3Q2MJR0 410 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 CRIP3Q6Q6R5 217 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 CRELD2Q6UXH1 353 aaPredicted RBP-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 PP632Q6XCG6 107 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 C1orf229Q6ZS94 237 aaPredicted RBP-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 TP53INP2Q8IXH6 220 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF454Q8N9F8 522 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 CHFRQ96EP1 664 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 TRIM11Q96F44 468 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 FBXL18Q96ME1 805 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 SPRR2GQ9BYE4 73 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 WASF2Q9Y6W5 498 aa-0.16□□□□□ -2.44
CDKL5-210ENST00000636046 C9orf172C9J069 976 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 C1QTNF3-AMACRE9PGA6 284 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 ATP5J2-PTCD1G3V325 749 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 GPR25O00155 361 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 PTCD1O75127 700 aaKnown RBP-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 CDK4P11802 303 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 BMP2P12643 396 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 HRCP23327 699 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 MAP2K3P46734 347 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 HNRNPA3P51991 378 aaKnown RBP-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 ZC3H6P61129 1189 aaKnown RBP-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 FHL2Q14192 279 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 ADGRE1Q14246 886 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 COL19A1Q14993 1142 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 MLANAQ16655 118 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 FOXR1Q6PIV2 292 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 PRR23CQ6ZRP0 262 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 MARCH10Q8NA82 808 aaPredicted RBP-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 USP33Q8TEY7 942 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 BTBD6Q96KE9 485 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 CEP89Q96ST8 783 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 BDH2Q9BUT1 245 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 SSBP4Q9BWG4 385 aaPredicted RBP-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 SLC6A16Q9GZN6 736 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 XYLT2Q9H1B5 865 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 IRF2BPLQ9H1B7 796 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 PCDHB8Q9UN66 801 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 HS3ST3A1Q9Y663 406 aa-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 SOS2Q07890 1332 aaPredicted RBP-0.17□□□□□ -2.44
CDKL5-210ENST00000636046 OTOL1A6NHN0 477 aaPredicted RBP-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 PYCARD-AS1I3L0S3 204 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 K7ESM1 405 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 ZBTB24O43167 697 aaPredicted RBP-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 SASH1O94885 1247 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 MYCNP04198 464 aaPredicted RBP-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 KRT1P04264 644 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 PRG2P13727 222 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 MX2P20592 715 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 FBLP22087 321 aaKnown RBP-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 MAGEA10P43363 369 aaPredicted RBP-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 HILS1P60008 231 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 ADAM17P78536 824 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 E2F1Q01094 437 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 GRIK4Q16099 956 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 GRIK5Q16478 980 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 ATXN7L2Q5T6C5 722 aaPredicted RBP-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 SAMD7Q7Z3H4 446 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 GOLGA6L1Q8N7Z2 621 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 TEPSINQ96N21 525 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 MDFICQ9P1T7 246 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 GDF2Q9UK05 429 aaPredicted RBP-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 KDM2AQ9Y2K7 1162 aa-0.18□□□□□ -2.44
CDKL5-210ENST00000636046 A0A1B0GVY2 172 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 TCAF2A6NFQ2 919 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 FIGNL2A6NMB9 653 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 PPP1R3GB7ZBB8 358 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 PRR23D1E9PI22 279 aaPredicted RBP-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 FAM229AH3BQW9 127 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 TBC1D4O60343 1298 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 TRIM13O60858 407 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 RNF40O75150 1001 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 UPP2O95045 317 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 GAS8-AS1O95177 125 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 TMEM253P0C7T8 217 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 PRR23D2P0DMB1 279 aaPredicted RBP-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms