RNA–Protein interactions for RNA: ENST00000635206.1

CCDC149-208, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC149, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-208ENST00000635206 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
CCDC149-208ENST00000635206 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
CCDC149-208ENST00000635206 COL5A2P05997 1499 aaPredicted RBP17.03■□□□□ 0.32
CCDC149-208ENST00000635206 F6X3S4 739 aa17.03■□□□□ 0.32
CCDC149-208ENST00000635206 BACH2Q9BYV9 841 aa17.03■□□□□ 0.32
CCDC149-208ENST00000635206 DAXXQ9UER7 740 aaPredicted RBP17.03■□□□□ 0.32
CCDC149-208ENST00000635206 ROBO1Q9Y6N7 1651 aa17.03■□□□□ 0.32
CCDC149-208ENST00000635206 OVOS2A0A0G2JMS6 1433 aa17.03■□□□□ 0.32
CCDC149-208ENST00000635206 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
CCDC149-208ENST00000635206 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
CCDC149-208ENST00000635206 KDM6AO15550 1401 aaPredicted RBP17.02■□□□□ 0.31
CCDC149-208ENST00000635206 HDGFL1Q5TGJ6 251 aa17.02■□□□□ 0.31
CCDC149-208ENST00000635206 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.31
CCDC149-208ENST00000635206 AHDC1Q5TGY3 1603 aaPredicted RBP17.01■□□□□ 0.31
CCDC149-208ENST00000635206 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
CCDC149-208ENST00000635206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCDC149-208ENST00000635206 CYP27B1O15528 508 aa17.01■□□□□ 0.31
CCDC149-208ENST00000635206 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
CCDC149-208ENST00000635206 FLIIQ13045 1269 aa17.01■□□□□ 0.31
CCDC149-208ENST00000635206 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
CCDC149-208ENST00000635206 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
CCDC149-208ENST00000635206 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
CCDC149-208ENST00000635206 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
CCDC149-208ENST00000635206 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
CCDC149-208ENST00000635206 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
CCDC149-208ENST00000635206 SIRT2Q8IXJ6 389 aa16.99■□□□□ 0.31
CCDC149-208ENST00000635206 SIPA1L3O60292 1781 aaPredicted RBP16.98■□□□□ 0.31
CCDC149-208ENST00000635206 FKBP5Q13451 457 aaPredicted RBP16.98■□□□□ 0.31
CCDC149-208ENST00000635206 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
CCDC149-208ENST00000635206 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 EVA1CP58658 441 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 SLC52A2Q9HAB3 445 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 PKD1L3Q7Z443 1732 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 HOXB7P09629 217 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 NFATC2IPQ8NCF5 419 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 MEIS3Q99687 375 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
CCDC149-208ENST00000635206 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.31
CCDC149-208ENST00000635206 SCN11AQ9UI33 1791 aa16.96■□□□□ 0.31
CCDC149-208ENST00000635206 C8orf34Q49A92 452 aa16.96■□□□□ 0.31
CCDC149-208ENST00000635206 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
CCDC149-208ENST00000635206 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
CCDC149-208ENST00000635206 ANXA1P04083 346 aa16.95■□□□□ 0.3
CCDC149-208ENST00000635206 DCAF5Q96JK2 942 aa16.95■□□□□ 0.3
CCDC149-208ENST00000635206 HEG1Q9ULI3 1381 aa16.95■□□□□ 0.3
CCDC149-208ENST00000635206 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
CCDC149-208ENST00000635206 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
CCDC149-208ENST00000635206 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
CCDC149-208ENST00000635206 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
CCDC149-208ENST00000635206 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
CCDC149-208ENST00000635206 IL2RBP14784 551 aa16.93■□□□□ 0.3
CCDC149-208ENST00000635206 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
CCDC149-208ENST00000635206 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
CCDC149-208ENST00000635206 ATP10DQ9P241 1426 aa16.92■□□□□ 0.3
CCDC149-208ENST00000635206 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
CCDC149-208ENST00000635206 NUCB1Q02818 461 aa16.92■□□□□ 0.3
CCDC149-208ENST00000635206 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
CCDC149-208ENST00000635206 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
CCDC149-208ENST00000635206 MRC1P22897 1456 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 CABP4P57796 275 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
CCDC149-208ENST00000635206 ANKRD44Q8N8A2 993 aa16.9■□□□□ 0.3
CCDC149-208ENST00000635206 DDX54Q8TDD1 881 aaKnown RBP16.9■□□□□ 0.3
CCDC149-208ENST00000635206 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
CCDC149-208ENST00000635206 GCC1Q96CN9 775 aa16.89■□□□□ 0.3
CCDC149-208ENST00000635206 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.3
CCDC149-208ENST00000635206 ANKRD45Q5TZF3 282 aa16.89■□□□□ 0.29
CCDC149-208ENST00000635206 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
CCDC149-208ENST00000635206 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
CCDC149-208ENST00000635206 MSH5O43196 834 aa16.88■□□□□ 0.29
CCDC149-208ENST00000635206 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
CCDC149-208ENST00000635206 RPAP2Q8IXW5 612 aaPredicted RBP16.88■□□□□ 0.29
CCDC149-208ENST00000635206 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
CCDC149-208ENST00000635206 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CCDC149-208ENST00000635206 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
CCDC149-208ENST00000635206 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
CCDC149-208ENST00000635206 PXDNLA1KZ92 1463 aa16.87■□□□□ 0.29
CCDC149-208ENST00000635206 C5P01031 1676 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 SHANK3Q9BYB0 1731 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 ADAMTS2O95450 1211 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 PDIA6Q15084 440 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 TTC5Q8N0Z6 440 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 ADCY9O60503 1353 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 NKX1-1Q15270 411 aaPredicted RBP16.86■□□□□ 0.29
CCDC149-208ENST00000635206 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
CCDC149-208ENST00000635206 TOM1O60784 492 aa16.85■□□□□ 0.29
CCDC149-208ENST00000635206 GNAI2P04899 355 aa16.85■□□□□ 0.29
CCDC149-208ENST00000635206 ANP32AP39687 249 aaKnown RBP16.85■□□□□ 0.29
CCDC149-208ENST00000635206 USP44Q9H0E7 712 aa16.85■□□□□ 0.29
CCDC149-208ENST00000635206 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
CCDC149-208ENST00000635206 BEND3Q5T5X7 828 aa16.84■□□□□ 0.29
CCDC149-208ENST00000635206 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms