RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 TRIM27P14373 513 aa13.65□□□□□ -0.22
COL11A1-211ENST00000635193 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
COL11A1-211ENST00000635193 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
COL11A1-211ENST00000635193 SH2B1Q9NRF2 756 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-211ENST00000635193 NEMFO60524 1076 aa13.65□□□□□ -0.22
COL11A1-211ENST00000635193 CASQ1P31415 396 aa13.65□□□□□ -0.22
COL11A1-211ENST00000635193 IRX3P78415 501 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-211ENST00000635193 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
COL11A1-211ENST00000635193 ADCY5O95622 1261 aa13.65□□□□□ -0.22
COL11A1-211ENST00000635193 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
COL11A1-211ENST00000635193 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
COL11A1-211ENST00000635193 LMAN1P49257 510 aa13.64□□□□□ -0.23
COL11A1-211ENST00000635193 MICALCLQ6ZW33 695 aa13.64□□□□□ -0.23
COL11A1-211ENST00000635193 KIF1BPQ96EK5 621 aa13.64□□□□□ -0.23
COL11A1-211ENST00000635193 SLC3A2P08195 630 aaKnown RBP13.64□□□□□ -0.23
COL11A1-211ENST00000635193 TXNDC2Q86VQ3 553 aa13.64□□□□□ -0.23
COL11A1-211ENST00000635193 CTNNA3Q9UI47 895 aa13.64□□□□□ -0.23
COL11A1-211ENST00000635193 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
COL11A1-211ENST00000635193 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
COL11A1-211ENST00000635193 ZSCAN23Q3MJ62 389 aa13.64□□□□□ -0.23
COL11A1-211ENST00000635193 PCF11O94913 1555 aaKnown RBP13.64□□□□□ -0.23
COL11A1-211ENST00000635193 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
COL11A1-211ENST00000635193 GLRX3O76003 335 aaKnown RBP13.63□□□□□ -0.23
COL11A1-211ENST00000635193 MCM3P25205 808 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 RAB11FIP3O75154 756 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 SEPT7Q16181 437 aaKnown RBP13.63□□□□□ -0.23
COL11A1-211ENST00000635193 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-211ENST00000635193 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
COL11A1-211ENST00000635193 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 NACAP1Q9BZK3 213 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 TRMT1Q9NXH9 659 aaKnown RBP13.63□□□□□ -0.23
COL11A1-211ENST00000635193 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 PAXBP1Q9Y5B6 917 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 RBM25P49756 843 aaKnown RBP13.63□□□□□ -0.23
COL11A1-211ENST00000635193 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
COL11A1-211ENST00000635193 PTPN23Q9H3S7 1636 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 MNAT1P51948 309 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 NUP133Q8WUM0 1156 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 KIF5CO60282 957 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
COL11A1-211ENST00000635193 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL11A1-211ENST00000635193 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 RNF187Q5TA31 235 aaPredicted RBP13.62□□□□□ -0.23
COL11A1-211ENST00000635193 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
COL11A1-211ENST00000635193 ZSCAN25Q6NSZ9 544 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
COL11A1-211ENST00000635193 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 KIF4BQ2VIQ3 1234 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
COL11A1-211ENST00000635193 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL11A1-211ENST00000635193 RPGRIP1LQ68CZ1 1315 aa13.61□□□□□ -0.23
COL11A1-211ENST00000635193 KIAA1328Q86T90 577 aa13.61□□□□□ -0.23
COL11A1-211ENST00000635193 CTAGE5O15320 804 aa13.61□□□□□ -0.23
COL11A1-211ENST00000635193 LRSAM1Q6UWE0 723 aa13.61□□□□□ -0.23
COL11A1-211ENST00000635193 DDX19AQ9NUU7 478 aaKnown RBP13.61□□□□□ -0.23
COL11A1-211ENST00000635193 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
COL11A1-211ENST00000635193 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
COL11A1-211ENST00000635193 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
COL11A1-211ENST00000635193 MYL6BP14649 208 aa13.6□□□□□ -0.23
COL11A1-211ENST00000635193 SYCP1Q15431 976 aa13.6□□□□□ -0.23
COL11A1-211ENST00000635193 C8orf34Q49A92 452 aa13.6□□□□□ -0.23
COL11A1-211ENST00000635193 CEP135Q66GS9 1140 aa13.6□□□□□ -0.23
COL11A1-211ENST00000635193 SMAP1Q8IYB5 467 aaPredicted RBP13.6□□□□□ -0.23
COL11A1-211ENST00000635193 RPRD2Q5VT52 1461 aaKnown RBP13.6□□□□□ -0.23
COL11A1-211ENST00000635193 NOLC1Q14978 699 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL11A1-211ENST00000635193 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
COL11A1-211ENST00000635193 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
COL11A1-211ENST00000635193 ANKRD62A6NC57 917 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
COL11A1-211ENST00000635193 GSDMDP57764 484 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 MCM10Q7L590 875 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 DDX54Q8TDD1 881 aaKnown RBP13.59□□□□□ -0.23
COL11A1-211ENST00000635193 WASF1Q92558 559 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 STX6O43752 255 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 ANKRD18AQ8IVF6 992 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 ZKSCAN5Q9Y2L8 839 aa13.59□□□□□ -0.23
COL11A1-211ENST00000635193 IMMTQ16891 758 aaKnown RBP13.59□□□□□ -0.23
COL11A1-211ENST00000635193 EIF5P55010 431 aaKnown RBP13.58□□□□□ -0.23
COL11A1-211ENST00000635193 MAP2K1Q02750 393 aaPredicted RBP13.58□□□□□ -0.23
COL11A1-211ENST00000635193 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.23
COL11A1-211ENST00000635193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.23
COL11A1-211ENST00000635193 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.24
COL11A1-211ENST00000635193 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.24
COL11A1-211ENST00000635193 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
COL11A1-211ENST00000635193 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
COL11A1-211ENST00000635193 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-211ENST00000635193 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-211ENST00000635193 UBE2HP62256 183 aa13.58□□□□□ -0.24
COL11A1-211ENST00000635193 TAF4BQ92750 862 aa13.58□□□□□ -0.24
COL11A1-211ENST00000635193 SLC52A1Q9NWF4 448 aa13.58□□□□□ -0.24
COL11A1-211ENST00000635193 IVLP07476 585 aa13.57□□□□□ -0.24
COL11A1-211ENST00000635193 GJB2P29033 226 aa13.57□□□□□ -0.24
COL11A1-211ENST00000635193 CEP131Q9UPN4 1083 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms