RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 U2AF1Q01081 240 aaKnown RBP eCLIP5.77□□□□□ -1.49
CHD2-220ENST00000630813 MYT1Q01538 1121 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 NEUROD2Q15784 382 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 TREML4Q6UXN2 200 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 HDGFL2Q7Z4V5 671 aaPredicted RBP5.77□□□□□ -1.49
CHD2-220ENST00000630813 WDR63Q8IWG1 891 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 NGEFQ8N5V2 710 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 ZNF516Q92618 1163 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 SLC26A8Q96RN1 970 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 RSPH6AQ9H0K4 717 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 TOPAZ1Q8N9V7 1692 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 FANCIQ9NVI1 1328 aa5.76□□□□□ -1.49
CHD2-220ENST00000630813 EDC4Q6P2E9 1401 aaKnown RBP5.76□□□□□ -1.49
CHD2-220ENST00000630813 FER1L4A9Z1Z3 1794 aa5.76□□□□□ -1.49
CHD2-220ENST00000630813 RLBP1P12271 317 aa5.76□□□□□ -1.49
CHD2-220ENST00000630813 IL13P35225 146 aa5.76□□□□□ -1.49
CHD2-220ENST00000630813 RARSP54136 660 aaKnown RBP5.76□□□□□ -1.49
CHD2-220ENST00000630813 DDX27Q96GQ7 796 aaKnown RBP5.76□□□□□ -1.49
CHD2-220ENST00000630813 PHACTR3Q96KR7 559 aa5.76□□□□□ -1.49
CHD2-220ENST00000630813 LARP6Q9BRS8 491 aaKnown RBP5.76□□□□□ -1.49
CHD2-220ENST00000630813 ESF1Q9H501 851 aaKnown RBP5.76□□□□□ -1.49
CHD2-220ENST00000630813 EMILIN1Q9Y6C2 1016 aa5.76□□□□□ -1.49
CHD2-220ENST00000630813 MAP2P11137 1827 aaKnown RBP5.76□□□□□ -1.49
CHD2-220ENST00000630813 NRKQ7Z2Y5 1582 aa5.76□□□□□ -1.49
CHD2-220ENST00000630813 LRRC7Q96NW7 1537 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 XRN1Q8IZH2 1706 aaKnown RBP5.75□□□□□ -1.49
CHD2-220ENST00000630813 PLEKHG3A1L390 1219 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 IGHDP01880 384 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 GGCXP38435 758 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 SAMD7Q7Z3H4 446 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 PACS2Q86VP3 889 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 NKX2-3Q8TAU0 364 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 PANK1Q8TE04 598 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 TSR2Q969E8 191 aaKnown RBP5.75□□□□□ -1.49
CHD2-220ENST00000630813 CFAP53Q96M91 514 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 EPAS1Q99814 870 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 EMILIN3Q9NT22 766 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 RYDENQ9NUL5 291 aaKnown RBP5.75□□□□□ -1.49
CHD2-220ENST00000630813 TBX22Q9Y458 520 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 AATKQ6ZMQ8 1374 aa5.75□□□□□ -1.49
CHD2-220ENST00000630813 TTC21BQ7Z4L5 1316 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 PEAK1Q9H792 1746 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 NUTM2FA1L443 756 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 U2SURPO15042 1029 aaKnown RBP5.74□□□□□ -1.49
CHD2-220ENST00000630813 DIAPH1O60610 1272 aaKnown RBP5.74□□□□□ -1.49
CHD2-220ENST00000630813 DGAT1O75907 488 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 RRS1Q15050 365 aaKnown RBP5.74□□□□□ -1.49
CHD2-220ENST00000630813 LCE2AQ5TA79 106 aaPredicted RBP5.74□□□□□ -1.49
CHD2-220ENST00000630813 RBM33Q96EV2 1170 aaKnown RBP5.74□□□□□ -1.49
CHD2-220ENST00000630813 AMOTL2Q9Y2J4 779 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 OVOS2A0A0J9YW53 1432 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 OVOS2Q6IE36 1432 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 ACEP12821 1306 aa5.74□□□□□ -1.49
CHD2-220ENST00000630813 RGPD8O14715 1765 aaPredicted RBP5.73□□□□□ -1.49
CHD2-220ENST00000630813 CDK12Q9NYV4 1490 aaPredicted RBP5.73□□□□□ -1.49
CHD2-220ENST00000630813 USP31Q70CQ4 1352 aa5.73□□□□□ -1.49
CHD2-220ENST00000630813 PRKAR2BP31323 418 aa5.73□□□□□ -1.49
CHD2-220ENST00000630813 HDGFP51858 240 aaKnown RBP5.73□□□□□ -1.49
CHD2-220ENST00000630813 EXOSC9Q06265 439 aaKnown RBP5.73□□□□□ -1.49
CHD2-220ENST00000630813 PDE3AQ14432 1141 aa5.73□□□□□ -1.49
CHD2-220ENST00000630813 TRIM67Q6ZTA4 783 aa5.73□□□□□ -1.49
CHD2-220ENST00000630813 THUMPD2Q9BTF0 503 aaKnown RBP5.73□□□□□ -1.49
CHD2-220ENST00000630813 PCDHB15Q9Y5E8 787 aa5.73□□□□□ -1.49
CHD2-220ENST00000630813 ITSN1Q15811 1721 aa5.73□□□□□ -1.49
CHD2-220ENST00000630813 MARF1Q9Y4F3 1742 aaKnown RBP5.73□□□□□ -1.49
CHD2-220ENST00000630813 USP6P35125 1406 aa5.73□□□□□ -1.49
CHD2-220ENST00000630813 ADAMTSL3P82987 1691 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 DIP2AQ14689 1571 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 NALCNQ8IZF0 1738 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 TCERG1O14776 1098 aaKnown RBP5.72□□□□□ -1.49
CHD2-220ENST00000630813 FCHSD2O94868 740 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 HMOX1P09601 288 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 ZNF853P0CG23 659 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 KCNA6P17658 529 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 RIPK4P57078 832 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 AEBP1Q8IUX7 1158 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 SSH1Q8WYL5 1049 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 BCL2L13Q9BXK5 485 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 BACH2Q9BYV9 841 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 TSKSQ9UJT2 592 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 COG6Q9Y2V7 657 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 PTCH1Q13635 1447 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 RIMS1Q86UR5 1692 aaKnown RBP5.72□□□□□ -1.49
CHD2-220ENST00000630813 IL16Q14005 1332 aa5.72□□□□□ -1.49
CHD2-220ENST00000630813 CEP170BQ9Y4F5 1589 aaPredicted RBP5.72□□□□□ -1.49
CHD2-220ENST00000630813 RGPD1P0DJD0 1748 aa5.71□□□□□ -1.49
CHD2-220ENST00000630813 PPM1GO15355 546 aaPredicted RBP5.71□□□□□ -1.5
CHD2-220ENST00000630813 MS4A1P11836 297 aa5.71□□□□□ -1.5
CHD2-220ENST00000630813 EIF4A2Q14240 407 aaKnown RBP5.71□□□□□ -1.5
CHD2-220ENST00000630813 NKX1-1Q15270 411 aaPredicted RBP5.71□□□□□ -1.5
CHD2-220ENST00000630813 NFE2L2Q16236 605 aa5.71□□□□□ -1.5
CHD2-220ENST00000630813 THEMISQ8N1K5 641 aaPredicted RBP5.71□□□□□ -1.5
CHD2-220ENST00000630813 TMUB1Q9BVT8 246 aa5.71□□□□□ -1.5
CHD2-220ENST00000630813 STK17AQ9UEE5 414 aa5.71□□□□□ -1.5
CHD2-220ENST00000630813 DLG5Q8TDM6 1919 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 SMAPO00193 183 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 SLC19A1P41440 591 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 MFSD10Q14728 455 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 HSP90AB2PQ58FF8 381 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 CENPQQ7L2Z9 268 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms