RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
SPTAN1-219ENST00000629378 IL13P35225 146 aa12.28□□□□□ -0.44
SPTAN1-219ENST00000629378 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
SPTAN1-219ENST00000629378 SULT6B1Q6IMI4 303 aa12.28□□□□□ -0.44
SPTAN1-219ENST00000629378 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
SPTAN1-219ENST00000629378 SLC4A9Q96Q91 983 aa12.28□□□□□ -0.44
SPTAN1-219ENST00000629378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.45
SPTAN1-219ENST00000629378 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
SPTAN1-219ENST00000629378 CC2D1BQ5T0F9 858 aaKnown RBP12.27□□□□□ -0.45
SPTAN1-219ENST00000629378 ZNF784Q8NCA9 323 aaPredicted RBP12.27□□□□□ -0.45
SPTAN1-219ENST00000629378 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
SPTAN1-219ENST00000629378 GOLGB1Q14789 3259 aaKnown RBP12.26□□□□□ -0.45
SPTAN1-219ENST00000629378 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
SPTAN1-219ENST00000629378 YBX3P16989 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
SPTAN1-219ENST00000629378 MTHFSP49914 203 aa12.26□□□□□ -0.45
SPTAN1-219ENST00000629378 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
SPTAN1-219ENST00000629378 KDM6AO15550 1401 aaPredicted RBP12.26□□□□□ -0.45
SPTAN1-219ENST00000629378 GNPATO15228 680 aa12.25□□□□□ -0.45
SPTAN1-219ENST00000629378 CABP4P57796 275 aa12.25□□□□□ -0.45
SPTAN1-219ENST00000629378 DCAF5Q96JK2 942 aa12.25□□□□□ -0.45
SPTAN1-219ENST00000629378 WWC3Q9ULE0 1092 aa12.25□□□□□ -0.45
SPTAN1-219ENST00000629378 ANP32CO43423 234 aa12.24□□□□□ -0.45
SPTAN1-219ENST00000629378 HMOX1P09601 288 aa12.24□□□□□ -0.45
SPTAN1-219ENST00000629378 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
SPTAN1-219ENST00000629378 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
SPTAN1-219ENST00000629378 PTCD1O75127 700 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-219ENST00000629378 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-219ENST00000629378 SSFA2P28290 1259 aa12.23□□□□□ -0.45
SPTAN1-219ENST00000629378 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
SPTAN1-219ENST00000629378 LGR6Q9HBX8 967 aa12.23□□□□□ -0.45
SPTAN1-219ENST00000629378 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-219ENST00000629378 KDRP35968 1356 aa12.22□□□□□ -0.45
SPTAN1-219ENST00000629378 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
SPTAN1-219ENST00000629378 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
SPTAN1-219ENST00000629378 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
SPTAN1-219ENST00000629378 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
SPTAN1-219ENST00000629378 COL5A3P25940 1745 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-219ENST00000629378 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
SPTAN1-219ENST00000629378 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
SPTAN1-219ENST00000629378 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-219ENST00000629378 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
SPTAN1-219ENST00000629378 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-219ENST00000629378 MMP10P09238 476 aa12.19□□□□□ -0.46
SPTAN1-219ENST00000629378 MTHFSDQ2M296 383 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-219ENST00000629378 AKAP4Q5JQC9 854 aa12.19□□□□□ -0.46
SPTAN1-219ENST00000629378 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
SPTAN1-219ENST00000629378 GRIN3BO60391 1043 aa12.18□□□□□ -0.46
SPTAN1-219ENST00000629378 RPS6KA4O75676 772 aa12.18□□□□□ -0.46
SPTAN1-219ENST00000629378 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
SPTAN1-219ENST00000629378 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-219ENST00000629378 TJP1Q07157 1748 aa12.17□□□□□ -0.46
SPTAN1-219ENST00000629378 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-219ENST00000629378 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-219ENST00000629378 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
SPTAN1-219ENST00000629378 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-219ENST00000629378 N4BP2Q86UW6 1770 aaPredicted RBP12.17□□□□□ -0.46
SPTAN1-219ENST00000629378 CNTNAP4Q9C0A0 1308 aa12.16□□□□□ -0.46
SPTAN1-219ENST00000629378 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-219ENST00000629378 GYS1P13807 737 aa12.16□□□□□ -0.46
SPTAN1-219ENST00000629378 RFC4P35249 363 aa12.16□□□□□ -0.46
SPTAN1-219ENST00000629378 INTS5Q6P9B9 1019 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-219ENST00000629378 DNAJC10Q8IXB1 793 aa12.16□□□□□ -0.46
SPTAN1-219ENST00000629378 C4AP0C0L4 1744 aa12.16□□□□□ -0.46
SPTAN1-219ENST00000629378 A0A0G2JLW4 131 aa12.15□□□□□ -0.46
SPTAN1-219ENST00000629378 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
SPTAN1-219ENST00000629378 NLGN1Q8N2Q7 840 aa12.15□□□□□ -0.46
SPTAN1-219ENST00000629378 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.47
SPTAN1-219ENST00000629378 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-219ENST00000629378 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
SPTAN1-219ENST00000629378 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
SPTAN1-219ENST00000629378 ADRA2BP18089 450 aa12.13□□□□□ -0.47
SPTAN1-219ENST00000629378 FKBP8Q14318 412 aa12.13□□□□□ -0.47
SPTAN1-219ENST00000629378 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 DPEP1P16444 411 aa12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 IL17REQ8NFR9 667 aa12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 ZNF526Q8TF50 670 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 PRKRIP1Q9H875 184 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
SPTAN1-219ENST00000629378 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
SPTAN1-219ENST00000629378 PXDNLA1KZ92 1463 aa12.11□□□□□ -0.47
SPTAN1-219ENST00000629378 DDR1Q08345 913 aa12.11□□□□□ -0.47
SPTAN1-219ENST00000629378 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
SPTAN1-219ENST00000629378 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
SPTAN1-219ENST00000629378 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-219ENST00000629378 MRC1P22897 1456 aa12.1□□□□□ -0.47
SPTAN1-219ENST00000629378 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
SPTAN1-219ENST00000629378 TGFB2P61812 414 aa12.1□□□□□ -0.47
SPTAN1-219ENST00000629378 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
SPTAN1-219ENST00000629378 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-219ENST00000629378 BCS1LQ9Y276 419 aa12.1□□□□□ -0.47
SPTAN1-219ENST00000629378 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
SPTAN1-219ENST00000629378 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
SPTAN1-219ENST00000629378 KCNA3P22001 575 aa12.09□□□□□ -0.47
SPTAN1-219ENST00000629378 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
SPTAN1-219ENST00000629378 TM4SF1P30408 202 aa12.09□□□□□ -0.47
SPTAN1-219ENST00000629378 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
SPTAN1-219ENST00000629378 C10orf71Q711Q0 1435 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms