RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 TOGARAM1Q9Y4F4 1720 aa10.47□□□□□ -0.73
TCF4-266ENST00000628689 VIRMAQ69YN4 1812 aaKnown RBP10.47□□□□□ -0.73
TCF4-266ENST00000628689 UBR3Q6ZT12 1888 aa10.47□□□□□ -0.73
TCF4-266ENST00000628689 AK7Q96M32 723 aa10.47□□□□□ -0.73
TCF4-266ENST00000628689 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
TCF4-266ENST00000628689 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
TCF4-266ENST00000628689 HMGB2P26583 209 aaKnown RBP10.46□□□□□ -0.73
TCF4-266ENST00000628689 MPHOSPH9Q99550 1183 aa10.46□□□□□ -0.73
TCF4-266ENST00000628689 CABP2Q9NPB3 220 aa10.46□□□□□ -0.73
TCF4-266ENST00000628689 NFAT5O94916 1531 aa10.45□□□□□ -0.74
TCF4-266ENST00000628689 SRPK2P78362 688 aaKnown RBP10.45□□□□□ -0.74
TCF4-266ENST00000628689 ANKRD24Q8TF21 1146 aa10.45□□□□□ -0.74
TCF4-266ENST00000628689 PIM2Q9P1W9 311 aa10.45□□□□□ -0.74
TCF4-266ENST00000628689 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
TCF4-266ENST00000628689 ZC3H4Q9UPT8 1303 aaKnown RBP10.44□□□□□ -0.74
TCF4-266ENST00000628689 SSFA2P28290 1259 aa10.44□□□□□ -0.74
TCF4-266ENST00000628689 PRPF38BQ5VTL8 546 aaKnown RBP10.44□□□□□ -0.74
TCF4-266ENST00000628689 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
TCF4-266ENST00000628689 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
TCF4-266ENST00000628689 TTC21BQ7Z4L5 1316 aa10.43□□□□□ -0.74
TCF4-266ENST00000628689 DALRD3Q5D0E6 543 aaKnown RBP10.43□□□□□ -0.74
TCF4-266ENST00000628689 PALLDQ8WX93 1383 aa10.42□□□□□ -0.74
TCF4-266ENST00000628689 CLEC11AQ9Y240 323 aa10.42□□□□□ -0.74
TCF4-266ENST00000628689 CASP8AP2Q9UKL3 1982 aa10.41□□□□□ -0.74
TCF4-266ENST00000628689 PASKQ96RG2 1323 aa10.41□□□□□ -0.74
TCF4-266ENST00000628689 POTEIP0CG38 1075 aa10.41□□□□□ -0.74
TCF4-266ENST00000628689 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
TCF4-266ENST00000628689 MAP2K1Q02750 393 aaPredicted RBP10.41□□□□□ -0.74
TCF4-266ENST00000628689 RASSF7Q02833 373 aa10.41□□□□□ -0.74
TCF4-266ENST00000628689 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
TCF4-266ENST00000628689 MCOLN1Q9GZU1 580 aa10.41□□□□□ -0.74
TCF4-266ENST00000628689 CCDC87Q9NVE4 849 aa10.41□□□□□ -0.74
TCF4-266ENST00000628689 KDM6AO15550 1401 aaPredicted RBP10.41□□□□□ -0.74
TCF4-266ENST00000628689 CCDC88AQ3V6T2 1871 aa10.4□□□□□ -0.74
TCF4-266ENST00000628689 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.75
TCF4-266ENST00000628689 TMEM88BA6NKF7 163 aa10.39□□□□□ -0.75
TCF4-266ENST00000628689 LMNB1P20700 586 aa10.39□□□□□ -0.75
TCF4-266ENST00000628689 NLGN1Q8N2Q7 840 aa10.39□□□□□ -0.75
TCF4-266ENST00000628689 LINC00116Q8NCU8 138 aa10.39□□□□□ -0.75
TCF4-266ENST00000628689 TMF1P82094 1093 aa10.38□□□□□ -0.75
TCF4-266ENST00000628689 DEFB115Q30KQ5 88 aa10.38□□□□□ -0.75
TCF4-266ENST00000628689 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
TCF4-266ENST00000628689 DCAF11Q8TEB1 546 aa10.38□□□□□ -0.75
TCF4-266ENST00000628689 TTC21AQ8NDW8 1320 aa10.37□□□□□ -0.75
TCF4-266ENST00000628689 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
TCF4-266ENST00000628689 CUL9Q8IWT3 2517 aa10.37□□□□□ -0.75
TCF4-266ENST00000628689 RASSF10A6NK89 507 aa10.37□□□□□ -0.75
TCF4-266ENST00000628689 GNPATO15228 680 aa10.37□□□□□ -0.75
TCF4-266ENST00000628689 CHRNA5P30532 468 aa10.37□□□□□ -0.75
TCF4-266ENST00000628689 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
TCF4-266ENST00000628689 LTV1Q96GA3 475 aaPredicted RBP10.37□□□□□ -0.75
TCF4-266ENST00000628689 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
TCF4-266ENST00000628689 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
TCF4-266ENST00000628689 DPY19L2Q6NUT2 758 aa10.36□□□□□ -0.75
TCF4-266ENST00000628689 SMARCC1Q92922 1105 aaPredicted RBP10.36□□□□□ -0.75
TCF4-266ENST00000628689 PARP3Q9Y6F1 533 aa10.36□□□□□ -0.75
TCF4-266ENST00000628689 LTN1O94822 1766 aa10.36□□□□□ -0.75
TCF4-266ENST00000628689 C4AP0C0L4 1744 aa10.36□□□□□ -0.75
TCF4-266ENST00000628689 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
TCF4-266ENST00000628689 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
TCF4-266ENST00000628689 GYS1P13807 737 aa10.34□□□□□ -0.75
TCF4-266ENST00000628689 SIK1P57059 783 aa10.34□□□□□ -0.75
TCF4-266ENST00000628689 ITPK1Q13572 414 aa10.34□□□□□ -0.75
TCF4-266ENST00000628689 TRAPPC3LQ5T215 181 aa10.34□□□□□ -0.75
TCF4-266ENST00000628689 PPARGC1BQ86YN6 1023 aaKnown RBP10.34□□□□□ -0.75
TCF4-266ENST00000628689 MAP2P11137 1827 aaKnown RBP10.34□□□□□ -0.75
TCF4-266ENST00000628689 MEGF6O75095 1541 aa10.33□□□□□ -0.76
TCF4-266ENST00000628689 SOX10P56693 466 aa10.33□□□□□ -0.76
TCF4-266ENST00000628689 DGKZQ13574 1117 aa10.33□□□□□ -0.76
TCF4-266ENST00000628689 IP6K1Q92551 441 aa10.33□□□□□ -0.76
TCF4-266ENST00000628689 BEGAINQ9BUH8 593 aa10.33□□□□□ -0.76
TCF4-266ENST00000628689 USP31Q70CQ4 1352 aa10.32□□□□□ -0.76
TCF4-266ENST00000628689 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
TCF4-266ENST00000628689 LDHDQ86WU2 507 aa10.32□□□□□ -0.76
TCF4-266ENST00000628689 PIGBQ92521 554 aa10.32□□□□□ -0.76
TCF4-266ENST00000628689 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
TCF4-266ENST00000628689 STAC3Q96MF2 364 aa10.32□□□□□ -0.76
TCF4-266ENST00000628689 TIAM2Q8IVF5 1701 aa10.32□□□□□ -0.76
TCF4-266ENST00000628689 ITGB4P16144 1822 aa10.31□□□□□ -0.76
TCF4-266ENST00000628689 NFKBIEO00221 500 aa10.31□□□□□ -0.76
TCF4-266ENST00000628689 HABP4Q5JVS0 413 aaKnown RBP10.31□□□□□ -0.76
TCF4-266ENST00000628689 RGPD2P0DJD1 1756 aa10.31□□□□□ -0.76
TCF4-266ENST00000628689 FAM208AQ9UK61 1670 aaKnown RBP10.31□□□□□ -0.76
TCF4-266ENST00000628689 CENPJQ9HC77 1338 aaPredicted RBP10.31□□□□□ -0.76
TCF4-266ENST00000628689 DLL1O00548 723 aa10.3□□□□□ -0.76
TCF4-266ENST00000628689 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
TCF4-266ENST00000628689 NME9Q86XW9 330 aa10.3□□□□□ -0.76
TCF4-266ENST00000628689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.3□□□□□ -0.76
TCF4-266ENST00000628689 GCC1Q96CN9 775 aa10.3□□□□□ -0.76
TCF4-266ENST00000628689 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
TCF4-266ENST00000628689 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
TCF4-266ENST00000628689 FXR2P51116 673 aaKnown RBP eCLIP10.29□□□□□ -0.76
TCF4-266ENST00000628689 DDR1Q08345 913 aa10.29□□□□□ -0.76
TCF4-266ENST00000628689 NBPF1Q3BBV0 1214 aa10.29□□□□□ -0.76
TCF4-266ENST00000628689 CAPNS2Q96L46 248 aa10.29□□□□□ -0.76
TCF4-266ENST00000628689 GPR101Q96P66 508 aaPredicted RBP10.29□□□□□ -0.76
TCF4-266ENST00000628689 ABT1Q9ULW3 272 aaKnown RBP10.29□□□□□ -0.76
TCF4-266ENST00000628689 DICER1Q9UPY3 1922 aaKnown RBP10.29□□□□□ -0.76
TCF4-266ENST00000628689 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
TCF4-266ENST00000628689 RFC4P35249 363 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms