RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 PHF14O94880 888 aa22.3■■□□□ 1.16
LINC00628-201ENST00000628516 C1orf141Q5JVX7 400 aa22.3■■□□□ 1.16
LINC00628-201ENST00000628516 ITPK1Q13572 414 aa22.29■■□□□ 1.16
LINC00628-201ENST00000628516 AMIGO3Q86WK7 504 aa22.29■■□□□ 1.16
LINC00628-201ENST00000628516 KDRP35968 1356 aa22.28■■□□□ 1.16
LINC00628-201ENST00000628516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.28■■□□□ 1.16
LINC00628-201ENST00000628516 CABP4P57796 275 aa22.28■■□□□ 1.16
LINC00628-201ENST00000628516 GPR162Q16538 588 aa22.28■■□□□ 1.16
LINC00628-201ENST00000628516 SMIM5Q71RC9 77 aa22.28■■□□□ 1.16
LINC00628-201ENST00000628516 KDM6AO15550 1401 aaPredicted RBP22.28■■□□□ 1.16
LINC00628-201ENST00000628516 CNGB1Q14028 1251 aaPredicted RBP22.27■■□□□ 1.16
LINC00628-201ENST00000628516 NLGN2Q8NFZ4 835 aa22.27■■□□□ 1.16
LINC00628-201ENST00000628516 GNPATO15228 680 aa22.26■■□□□ 1.15
LINC00628-201ENST00000628516 SSFA2P28290 1259 aa22.26■■□□□ 1.15
LINC00628-201ENST00000628516 RBM42Q9BTD8 480 aaKnown RBP22.26■■□□□ 1.15
LINC00628-201ENST00000628516 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
LINC00628-201ENST00000628516 UBR3Q6ZT12 1888 aa22.25■■□□□ 1.15
LINC00628-201ENST00000628516 GOLGB1Q14789 3259 aaKnown RBP22.25■■□□□ 1.15
LINC00628-201ENST00000628516 DIAPH1O60610 1272 aaKnown RBP22.23■■□□□ 1.15
LINC00628-201ENST00000628516 HMOX1P09601 288 aa22.23■■□□□ 1.15
LINC00628-201ENST00000628516 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
LINC00628-201ENST00000628516 SLC4A9Q96Q91 983 aa22.23■■□□□ 1.15
LINC00628-201ENST00000628516 NFATC2IPQ8NCF5 419 aa22.22■■□□□ 1.15
LINC00628-201ENST00000628516 NPC1L1Q9UHC9 1359 aa22.22■■□□□ 1.15
LINC00628-201ENST00000628516 AKAP4Q5JQC9 854 aa22.2■■□□□ 1.14
LINC00628-201ENST00000628516 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
LINC00628-201ENST00000628516 PTCD1O75127 700 aaKnown RBP22.18■■□□□ 1.14
LINC00628-201ENST00000628516 CD2APQ9Y5K6 639 aa22.18■■□□□ 1.14
LINC00628-201ENST00000628516 TRAPPC3LQ5T215 181 aa22.17■■□□□ 1.14
LINC00628-201ENST00000628516 CHD4Q14839 1912 aa22.16■■□□□ 1.14
LINC00628-201ENST00000628516 RC3H1Q5TC82 1133 aaKnown RBP22.16■■□□□ 1.14
LINC00628-201ENST00000628516 LGR6Q9HBX8 967 aa22.16■■□□□ 1.14
LINC00628-201ENST00000628516 ZNF831Q5JPB2 1677 aa22.16■■□□□ 1.14
LINC00628-201ENST00000628516 CNTNAP4Q9C0A0 1308 aa22.15■■□□□ 1.14
LINC00628-201ENST00000628516 MTHFSDQ2M296 383 aaKnown RBP22.15■■□□□ 1.14
LINC00628-201ENST00000628516 ZNF784Q8NCA9 323 aaPredicted RBP22.15■■□□□ 1.14
LINC00628-201ENST00000628516 U2SURPO15042 1029 aaKnown RBP22.14■■□□□ 1.13
LINC00628-201ENST00000628516 YBX3P16989 372 aaKnown RBP eCLIP22.14■■□□□ 1.13
LINC00628-201ENST00000628516 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.13
LINC00628-201ENST00000628516 SCN11AQ9UI33 1791 aa22.14■■□□□ 1.13
LINC00628-201ENST00000628516 RNMTO43148 476 aaKnown RBP22.13■■□□□ 1.13
LINC00628-201ENST00000628516 RPS6KA4O75676 772 aa22.13■■□□□ 1.13
LINC00628-201ENST00000628516 COL5A3P25940 1745 aaPredicted RBP22.12■■□□□ 1.13
LINC00628-201ENST00000628516 COL3A1P02461 1466 aaPredicted RBP22.12■■□□□ 1.13
LINC00628-201ENST00000628516 GRIN3BO60391 1043 aa22.12■■□□□ 1.13
LINC00628-201ENST00000628516 ADRA2BP18089 450 aa22.12■■□□□ 1.13
LINC00628-201ENST00000628516 ARHGEF1Q92888 912 aaKnown RBP22.12■■□□□ 1.13
LINC00628-201ENST00000628516 RFC4P35249 363 aa22.11■■□□□ 1.13
LINC00628-201ENST00000628516 MMP10P09238 476 aa22.1■■□□□ 1.13
LINC00628-201ENST00000628516 CRKLP46109 303 aaKnown RBP22.1■■□□□ 1.13
LINC00628-201ENST00000628516 NLGN1Q8N2Q7 840 aa22.09■■□□□ 1.13
LINC00628-201ENST00000628516 SLC39A6Q13433 755 aa22.08■■□□□ 1.13
LINC00628-201ENST00000628516 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
LINC00628-201ENST00000628516 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.12
LINC00628-201ENST00000628516 MRC1P22897 1456 aa22.07■■□□□ 1.12
LINC00628-201ENST00000628516 GYS1P13807 737 aa22.06■■□□□ 1.12
LINC00628-201ENST00000628516 DNAJC10Q8IXB1 793 aa22.06■■□□□ 1.12
LINC00628-201ENST00000628516 WWC3Q9ULE0 1092 aa22.06■■□□□ 1.12
LINC00628-201ENST00000628516 TJP1Q07157 1748 aa22.06■■□□□ 1.12
LINC00628-201ENST00000628516 GAS2L2Q8NHY3 880 aa22.05■■□□□ 1.12
LINC00628-201ENST00000628516 VIRMAQ69YN4 1812 aaKnown RBP22.04■■□□□ 1.12
LINC00628-201ENST00000628516 INTS5Q6P9B9 1019 aaKnown RBP22.04■■□□□ 1.12
LINC00628-201ENST00000628516 PPP2R1AP30153 589 aa22.03■■□□□ 1.12
LINC00628-201ENST00000628516 NUDCQ9Y266 331 aa22.03■■□□□ 1.12
LINC00628-201ENST00000628516 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.12
LINC00628-201ENST00000628516 ADAMTS7Q9UKP4 1686 aa22.02■■□□□ 1.12
LINC00628-201ENST00000628516 GNAT3A8MTJ3 354 aa22.02■■□□□ 1.12
LINC00628-201ENST00000628516 CCDC87Q9NVE4 849 aa22.02■■□□□ 1.12
LINC00628-201ENST00000628516 SRP68Q9UHB9 627 aaKnown RBP22.02■■□□□ 1.12
LINC00628-201ENST00000628516 PARP3Q9Y6F1 533 aa22.02■■□□□ 1.12
LINC00628-201ENST00000628516 C4AP0C0L4 1744 aa22.01■■□□□ 1.11
LINC00628-201ENST00000628516 PRKAR2BP31323 418 aa22.01■■□□□ 1.11
LINC00628-201ENST00000628516 TTC5Q8N0Z6 440 aa22.01■■□□□ 1.11
LINC00628-201ENST00000628516 KCPQ6ZWJ8 1503 aa22.01■■□□□ 1.11
LINC00628-201ENST00000628516 CYP19A1P11511 503 aaPredicted RBP22■■□□□ 1.11
LINC00628-201ENST00000628516 TEFQ10587 303 aa22■■□□□ 1.11
LINC00628-201ENST00000628516 IL17REQ8NFR9 667 aa22■■□□□ 1.11
LINC00628-201ENST00000628516 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
LINC00628-201ENST00000628516 USP42Q9H9J4 1324 aaKnown RBP22■■□□□ 1.11
LINC00628-201ENST00000628516 FKBP8Q14318 412 aa21.99■■□□□ 1.11
LINC00628-201ENST00000628516 VSIG10Q8N0Z9 540 aa21.99■■□□□ 1.11
LINC00628-201ENST00000628516 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
LINC00628-201ENST00000628516 U2AF1L5P0DN76 240 aaPredicted RBP21.98■■□□□ 1.11
LINC00628-201ENST00000628516 TGFB2P61812 414 aa21.98■■□□□ 1.11
LINC00628-201ENST00000628516 U2AF1Q01081 240 aaKnown RBP eCLIP21.98■■□□□ 1.11
LINC00628-201ENST00000628516 SOS1Q07889 1333 aaPredicted RBP21.98■■□□□ 1.11
LINC00628-201ENST00000628516 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
LINC00628-201ENST00000628516 ZPR1O75312 459 aa21.97■■□□□ 1.11
LINC00628-201ENST00000628516 ZBTB1Q9Y2K1 713 aa21.97■■□□□ 1.11
LINC00628-201ENST00000628516 PXDNLA1KZ92 1463 aa21.96■■□□□ 1.11
LINC00628-201ENST00000628516 A0A0G2JLW4 131 aa21.96■■□□□ 1.11
LINC00628-201ENST00000628516 KIF13BQ9NQT8 1826 aa21.95■■□□□ 1.1
LINC00628-201ENST00000628516 USPL1Q5W0Q7 1092 aa21.95■■□□□ 1.1
LINC00628-201ENST00000628516 ZNF790Q6PG37 636 aa21.95■■□□□ 1.1
LINC00628-201ENST00000628516 FCHSD2O94868 740 aa21.93■■□□□ 1.1
LINC00628-201ENST00000628516 STARD3NLO95772 234 aa21.93■■□□□ 1.1
LINC00628-201ENST00000628516 DPEP1P16444 411 aa21.93■■□□□ 1.1
LINC00628-201ENST00000628516 CANXP27824 592 aaKnown RBP21.93■■□□□ 1.1
LINC00628-201ENST00000628516 COL15A1P39059 1388 aa21.93■■□□□ 1.1
LINC00628-201ENST00000628516 DDR1Q08345 913 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms