RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ATP6V1AP38606 617 aa16.42■□□□□ 0.22
UBR1-212ENST00000627960 ITPK1Q13572 414 aa16.42■□□□□ 0.22
UBR1-212ENST00000627960 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
UBR1-212ENST00000627960 ZNF831Q5JPB2 1677 aa16.42■□□□□ 0.22
UBR1-212ENST00000627960 CABP4P57796 275 aa16.41■□□□□ 0.22
UBR1-212ENST00000627960 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
UBR1-212ENST00000627960 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
UBR1-212ENST00000627960 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
UBR1-212ENST00000627960 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
UBR1-212ENST00000627960 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
UBR1-212ENST00000627960 CHD4Q14839 1912 aa16.39■□□□□ 0.21
UBR1-212ENST00000627960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
UBR1-212ENST00000627960 PHF14O94880 888 aa16.39■□□□□ 0.21
UBR1-212ENST00000627960 SSFA2P28290 1259 aa16.39■□□□□ 0.21
UBR1-212ENST00000627960 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
UBR1-212ENST00000627960 SLC4A9Q96Q91 983 aa16.39■□□□□ 0.21
UBR1-212ENST00000627960 VIRMAQ69YN4 1812 aaKnown RBP16.39■□□□□ 0.21
UBR1-212ENST00000627960 HMOX1P09601 288 aa16.38■□□□□ 0.21
UBR1-212ENST00000627960 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
UBR1-212ENST00000627960 AKAP4Q5JQC9 854 aa16.38■□□□□ 0.21
UBR1-212ENST00000627960 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
UBR1-212ENST00000627960 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
UBR1-212ENST00000627960 COL5A3P25940 1745 aaPredicted RBP16.37■□□□□ 0.21
UBR1-212ENST00000627960 GNPATO15228 680 aa16.37■□□□□ 0.21
UBR1-212ENST00000627960 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
UBR1-212ENST00000627960 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
UBR1-212ENST00000627960 GPR162Q16538 588 aa16.35■□□□□ 0.21
UBR1-212ENST00000627960 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
UBR1-212ENST00000627960 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
UBR1-212ENST00000627960 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
UBR1-212ENST00000627960 CD2APQ9Y5K6 639 aa16.34■□□□□ 0.21
UBR1-212ENST00000627960 RNMTO43148 476 aaKnown RBP16.33■□□□□ 0.2
UBR1-212ENST00000627960 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
UBR1-212ENST00000627960 SLC52A2Q9HAB3 445 aa16.33■□□□□ 0.2
UBR1-212ENST00000627960 RTCBQ9Y3I0 505 aaKnown RBP16.33■□□□□ 0.2
UBR1-212ENST00000627960 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
UBR1-212ENST00000627960 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
UBR1-212ENST00000627960 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
UBR1-212ENST00000627960 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
UBR1-212ENST00000627960 TJP1Q07157 1748 aa16.31■□□□□ 0.2
UBR1-212ENST00000627960 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
UBR1-212ENST00000627960 RPS6KA4O75676 772 aa16.31■□□□□ 0.2
UBR1-212ENST00000627960 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
UBR1-212ENST00000627960 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
UBR1-212ENST00000627960 MRC1P22897 1456 aa16.3■□□□□ 0.2
UBR1-212ENST00000627960 ADRA2BP18089 450 aa16.3■□□□□ 0.2
UBR1-212ENST00000627960 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
UBR1-212ENST00000627960 CFAP53Q96M91 514 aa16.29■□□□□ 0.2
UBR1-212ENST00000627960 UTRNP46939 3433 aa16.29■□□□□ 0.2
UBR1-212ENST00000627960 PPP2R1AP30153 589 aa16.28■□□□□ 0.2
UBR1-212ENST00000627960 GRIN3BO60391 1043 aa16.27■□□□□ 0.2
UBR1-212ENST00000627960 MMP10P09238 476 aa16.27■□□□□ 0.2
UBR1-212ENST00000627960 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
UBR1-212ENST00000627960 RFC4P35249 363 aa16.27■□□□□ 0.2
UBR1-212ENST00000627960 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.2
UBR1-212ENST00000627960 SLC39A6Q13433 755 aa16.27■□□□□ 0.2
UBR1-212ENST00000627960 NLGN1Q8N2Q7 840 aa16.27■□□□□ 0.2
UBR1-212ENST00000627960 C4AP0C0L4 1744 aa16.27■□□□□ 0.19
UBR1-212ENST00000627960 ZNF784Q8NCA9 323 aaPredicted RBP16.26■□□□□ 0.19
UBR1-212ENST00000627960 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
UBR1-212ENST00000627960 KIF13BQ9NQT8 1826 aa16.25■□□□□ 0.19
UBR1-212ENST00000627960 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
UBR1-212ENST00000627960 GYS1P13807 737 aa16.25■□□□□ 0.19
UBR1-212ENST00000627960 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
UBR1-212ENST00000627960 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
UBR1-212ENST00000627960 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
UBR1-212ENST00000627960 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
UBR1-212ENST00000627960 UBR2Q8IWV8 1755 aa16.24■□□□□ 0.19
UBR1-212ENST00000627960 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
UBR1-212ENST00000627960 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
UBR1-212ENST00000627960 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
UBR1-212ENST00000627960 PRKAR2BP31323 418 aa16.23■□□□□ 0.19
UBR1-212ENST00000627960 PHACTR3Q96KR7 559 aa16.23■□□□□ 0.19
UBR1-212ENST00000627960 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
UBR1-212ENST00000627960 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
UBR1-212ENST00000627960 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
UBR1-212ENST00000627960 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
UBR1-212ENST00000627960 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
UBR1-212ENST00000627960 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBR1-212ENST00000627960 TEFQ10587 303 aa16.21■□□□□ 0.19
UBR1-212ENST00000627960 SRP68Q9UHB9 627 aaKnown RBP16.21■□□□□ 0.19
UBR1-212ENST00000627960 KIAA1551Q9HCM1 1747 aa16.21■□□□□ 0.19
UBR1-212ENST00000627960 USP42Q9H9J4 1324 aaKnown RBP16.2■□□□□ 0.18
UBR1-212ENST00000627960 FCHSD2O94868 740 aa16.2■□□□□ 0.18
UBR1-212ENST00000627960 TTC5Q8N0Z6 440 aa16.2■□□□□ 0.18
UBR1-212ENST00000627960 PARP3Q9Y6F1 533 aa16.2■□□□□ 0.18
UBR1-212ENST00000627960 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
UBR1-212ENST00000627960 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
UBR1-212ENST00000627960 TGFB2P61812 414 aa16.19■□□□□ 0.18
UBR1-212ENST00000627960 FKBP8Q14318 412 aa16.19■□□□□ 0.18
UBR1-212ENST00000627960 C10orf71Q711Q0 1435 aa16.19■□□□□ 0.18
UBR1-212ENST00000627960 CEMIPQ8WUJ3 1361 aa16.18■□□□□ 0.18
UBR1-212ENST00000627960 ZNF790Q6PG37 636 aa16.18■□□□□ 0.18
UBR1-212ENST00000627960 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
UBR1-212ENST00000627960 PXDNLA1KZ92 1463 aa16.17■□□□□ 0.18
UBR1-212ENST00000627960 ZPR1O75312 459 aa16.17■□□□□ 0.18
UBR1-212ENST00000627960 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
UBR1-212ENST00000627960 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
UBR1-212ENST00000627960 ZBTB1Q9Y2K1 713 aa16.17■□□□□ 0.18
UBR1-212ENST00000627960 STARD3NLO95772 234 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms