RNA–Protein interactions for RNA: ENST00000627895.2

PSMA6-216, Transcript of proteasome subunit alpha 6, humanhuman

TSL 5 BASIC

Gene PSMA6, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-216ENST00000627895 KDM6AO15550 1401 aaPredicted RBP23.38■■□□□ 1.33
PSMA6-216ENST00000627895 ATP6V1AP38606 617 aa23.37■■□□□ 1.33
PSMA6-216ENST00000627895 SSFA2P28290 1259 aa23.36■■□□□ 1.33
PSMA6-216ENST00000627895 SCN11AQ9UI33 1791 aa23.36■■□□□ 1.33
PSMA6-216ENST00000627895 DIAPH1O60610 1272 aaKnown RBP23.35■■□□□ 1.33
PSMA6-216ENST00000627895 CABP4P57796 275 aa23.35■■□□□ 1.33
PSMA6-216ENST00000627895 KLHL34Q8N239 644 aa23.35■■□□□ 1.33
PSMA6-216ENST00000627895 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
PSMA6-216ENST00000627895 ITPK1Q13572 414 aa23.33■■□□□ 1.33
PSMA6-216ENST00000627895 CHD4Q14839 1912 aa23.33■■□□□ 1.32
PSMA6-216ENST00000627895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.32■■□□□ 1.32
PSMA6-216ENST00000627895 AKAP4Q5JQC9 854 aa23.32■■□□□ 1.32
PSMA6-216ENST00000627895 MSL1Q68DK7 614 aa23.32■■□□□ 1.32
PSMA6-216ENST00000627895 COL5A3P25940 1745 aaPredicted RBP23.32■■□□□ 1.32
PSMA6-216ENST00000627895 PHF14O94880 888 aa23.31■■□□□ 1.32
PSMA6-216ENST00000627895 RBM42Q9BTD8 480 aaKnown RBP23.31■■□□□ 1.32
PSMA6-216ENST00000627895 VIRMAQ69YN4 1812 aaKnown RBP23.31■■□□□ 1.32
PSMA6-216ENST00000627895 GNPATO15228 680 aa23.3■■□□□ 1.32
PSMA6-216ENST00000627895 HMOX1P09601 288 aa23.29■■□□□ 1.32
PSMA6-216ENST00000627895 AMIGO3Q86WK7 504 aa23.29■■□□□ 1.32
PSMA6-216ENST00000627895 GPR162Q16538 588 aa23.28■■□□□ 1.32
PSMA6-216ENST00000627895 NFATC2IPQ8NCF5 419 aa23.28■■□□□ 1.32
PSMA6-216ENST00000627895 COL3A1P02461 1466 aaPredicted RBP23.28■■□□□ 1.32
PSMA6-216ENST00000627895 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
PSMA6-216ENST00000627895 RC3H1Q5TC82 1133 aaKnown RBP23.27■■□□□ 1.32
PSMA6-216ENST00000627895 CNGB1Q14028 1251 aaPredicted RBP23.26■■□□□ 1.31
PSMA6-216ENST00000627895 NLGN2Q8NFZ4 835 aa23.26■■□□□ 1.31
PSMA6-216ENST00000627895 SLC4A9Q96Q91 983 aa23.26■■□□□ 1.31
PSMA6-216ENST00000627895 RTCBQ9Y3I0 505 aaKnown RBP23.26■■□□□ 1.31
PSMA6-216ENST00000627895 CD2APQ9Y5K6 639 aa23.26■■□□□ 1.31
PSMA6-216ENST00000627895 CNTNAP4Q9C0A0 1308 aa23.26■■□□□ 1.31
PSMA6-216ENST00000627895 UTRNP46939 3433 aa23.26■■□□□ 1.31
PSMA6-216ENST00000627895 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
PSMA6-216ENST00000627895 MRC1P22897 1456 aa23.24■■□□□ 1.31
PSMA6-216ENST00000627895 ADRA2BP18089 450 aa23.24■■□□□ 1.31
PSMA6-216ENST00000627895 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
PSMA6-216ENST00000627895 PTCD1O75127 700 aaKnown RBP23.23■■□□□ 1.31
PSMA6-216ENST00000627895 TRAPPC3LQ5T215 181 aa23.23■■□□□ 1.31
PSMA6-216ENST00000627895 SMIM5Q71RC9 77 aa23.23■■□□□ 1.31
PSMA6-216ENST00000627895 CFAP53Q96M91 514 aa23.23■■□□□ 1.31
PSMA6-216ENST00000627895 TJP1Q07157 1748 aa23.22■■□□□ 1.31
PSMA6-216ENST00000627895 MTHFSDQ2M296 383 aaKnown RBP23.22■■□□□ 1.31
PSMA6-216ENST00000627895 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
PSMA6-216ENST00000627895 RNMTO43148 476 aaKnown RBP23.21■■□□□ 1.31
PSMA6-216ENST00000627895 RPS6KA4O75676 772 aa23.21■■□□□ 1.31
PSMA6-216ENST00000627895 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
PSMA6-216ENST00000627895 MYH14Q7Z406 1995 aaKnown RBP23.21■■□□□ 1.31
PSMA6-216ENST00000627895 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
PSMA6-216ENST00000627895 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
PSMA6-216ENST00000627895 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
PSMA6-216ENST00000627895 NLGN1Q8N2Q7 840 aa23.18■■□□□ 1.3
PSMA6-216ENST00000627895 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
PSMA6-216ENST00000627895 RFC4P35249 363 aa23.17■■□□□ 1.3
PSMA6-216ENST00000627895 GAS2L2Q8NHY3 880 aa23.17■■□□□ 1.3
PSMA6-216ENST00000627895 ARHGEF1Q92888 912 aaKnown RBP23.17■■□□□ 1.3
PSMA6-216ENST00000627895 CRKLP46109 303 aaKnown RBP23.16■■□□□ 1.3
PSMA6-216ENST00000627895 NUDCQ9Y266 331 aa23.16■■□□□ 1.3
PSMA6-216ENST00000627895 MMP10P09238 476 aa23.14■■□□□ 1.29
PSMA6-216ENST00000627895 PPP2R1AP30153 589 aa23.14■■□□□ 1.29
PSMA6-216ENST00000627895 KIF13BQ9NQT8 1826 aa23.14■■□□□ 1.29
PSMA6-216ENST00000627895 UBR2Q8IWV8 1755 aa23.14■■□□□ 1.29
PSMA6-216ENST00000627895 GNAT3A8MTJ3 354 aa23.13■■□□□ 1.29
PSMA6-216ENST00000627895 YBX3P16989 372 aaKnown RBP eCLIP23.13■■□□□ 1.29
PSMA6-216ENST00000627895 ZNF784Q8NCA9 323 aaPredicted RBP23.13■■□□□ 1.29
PSMA6-216ENST00000627895 KCPQ6ZWJ8 1503 aa23.13■■□□□ 1.29
PSMA6-216ENST00000627895 GYS1P13807 737 aa23.12■■□□□ 1.29
PSMA6-216ENST00000627895 SIPA1L3O60292 1781 aaPredicted RBP23.12■■□□□ 1.29
PSMA6-216ENST00000627895 SLC39A6Q13433 755 aa23.11■■□□□ 1.29
PSMA6-216ENST00000627895 VSIG10Q8N0Z9 540 aa23.11■■□□□ 1.29
PSMA6-216ENST00000627895 TEFQ10587 303 aa23.1■■□□□ 1.29
PSMA6-216ENST00000627895 DNAJC10Q8IXB1 793 aa23.1■■□□□ 1.29
PSMA6-216ENST00000627895 CCDC87Q9NVE4 849 aa23.1■■□□□ 1.29
PSMA6-216ENST00000627895 PRKAR2BP31323 418 aa23.09■■□□□ 1.29
PSMA6-216ENST00000627895 INTS5Q6P9B9 1019 aaKnown RBP23.09■■□□□ 1.29
PSMA6-216ENST00000627895 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
PSMA6-216ENST00000627895 RSPH6AQ9H0K4 717 aa23.09■■□□□ 1.29
PSMA6-216ENST00000627895 PARP3Q9Y6F1 533 aa23.08■■□□□ 1.29
PSMA6-216ENST00000627895 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.28
PSMA6-216ENST00000627895 CYP19A1P11511 503 aaPredicted RBP23.07■■□□□ 1.28
PSMA6-216ENST00000627895 IL17REQ8NFR9 667 aa23.07■■□□□ 1.28
PSMA6-216ENST00000627895 FCHSD2O94868 740 aa23.06■■□□□ 1.28
PSMA6-216ENST00000627895 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
PSMA6-216ENST00000627895 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
PSMA6-216ENST00000627895 C10orf71Q711Q0 1435 aa23.06■■□□□ 1.28
PSMA6-216ENST00000627895 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
PSMA6-216ENST00000627895 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
PSMA6-216ENST00000627895 TGFB2P61812 414 aa23.05■■□□□ 1.28
PSMA6-216ENST00000627895 PHACTR3Q96KR7 559 aa23.05■■□□□ 1.28
PSMA6-216ENST00000627895 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
PSMA6-216ENST00000627895 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
PSMA6-216ENST00000627895 N4BP2Q86UW6 1770 aaPredicted RBP23.04■■□□□ 1.28
PSMA6-216ENST00000627895 ZPR1O75312 459 aa23.03■■□□□ 1.28
PSMA6-216ENST00000627895 ZNF790Q6PG37 636 aa23.03■■□□□ 1.28
PSMA6-216ENST00000627895 SRP68Q9UHB9 627 aaKnown RBP23.03■■□□□ 1.28
PSMA6-216ENST00000627895 STARD3NLO95772 234 aa23.02■■□□□ 1.28
PSMA6-216ENST00000627895 TEX13AQ9BXU3 409 aaPredicted RBP23.02■■□□□ 1.28
PSMA6-216ENST00000627895 COL15A1P39059 1388 aa23.01■■□□□ 1.27
PSMA6-216ENST00000627895 FKBP8Q14318 412 aa23.01■■□□□ 1.27
PSMA6-216ENST00000627895 ZBTB1Q9Y2K1 713 aa23.01■■□□□ 1.27
PSMA6-216ENST00000627895 HEG1Q9ULI3 1381 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms