RNA–Protein interactions for RNA: ENST00000626619.2

SOX2-OT-239, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 660 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-239ENST00000626619 CABP4P57796 275 aa18.61■□□□□ 0.57
SOX2-OT-239ENST00000626619 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
SOX2-OT-239ENST00000626619 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
SOX2-OT-239ENST00000626619 NFATC2IPQ8NCF5 419 aa18.6■□□□□ 0.57
SOX2-OT-239ENST00000626619 SYT17Q9BSW7 474 aa18.6■□□□□ 0.57
SOX2-OT-239ENST00000626619 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
SOX2-OT-239ENST00000626619 PPP2R1AP30153 589 aa18.59■□□□□ 0.57
SOX2-OT-239ENST00000626619 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
SOX2-OT-239ENST00000626619 AK7Q96M32 723 aa18.59■□□□□ 0.57
SOX2-OT-239ENST00000626619 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
SOX2-OT-239ENST00000626619 QSER1Q2KHR3 1735 aa18.59■□□□□ 0.57
SOX2-OT-239ENST00000626619 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.56
SOX2-OT-239ENST00000626619 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
SOX2-OT-239ENST00000626619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
SOX2-OT-239ENST00000626619 TAF1LQ8IZX4 1826 aa18.57■□□□□ 0.56
SOX2-OT-239ENST00000626619 GNPATO15228 680 aa18.56■□□□□ 0.56
SOX2-OT-239ENST00000626619 RNMTO43148 476 aaKnown RBP18.56■□□□□ 0.56
SOX2-OT-239ENST00000626619 AKAP4Q5JQC9 854 aa18.56■□□□□ 0.56
SOX2-OT-239ENST00000626619 NLGN2Q8NFZ4 835 aa18.56■□□□□ 0.56
SOX2-OT-239ENST00000626619 SLC39A6Q13433 755 aa18.54■□□□□ 0.56
SOX2-OT-239ENST00000626619 PHACTR3Q96KR7 559 aa18.54■□□□□ 0.56
SOX2-OT-239ENST00000626619 POLD1P28340 1107 aa18.53■□□□□ 0.56
SOX2-OT-239ENST00000626619 SLC52A2Q9HAB3 445 aa18.53■□□□□ 0.56
SOX2-OT-239ENST00000626619 PRKAR2BP31323 418 aa18.52■□□□□ 0.56
SOX2-OT-239ENST00000626619 RSPH6AQ9H0K4 717 aa18.52■□□□□ 0.56
SOX2-OT-239ENST00000626619 MRC1P22897 1456 aa18.52■□□□□ 0.55
SOX2-OT-239ENST00000626619 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.55
SOX2-OT-239ENST00000626619 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
SOX2-OT-239ENST00000626619 UBR3Q6ZT12 1888 aa18.5■□□□□ 0.55
SOX2-OT-239ENST00000626619 SSFA2P28290 1259 aa18.5■□□□□ 0.55
SOX2-OT-239ENST00000626619 CFAP53Q96M91 514 aa18.5■□□□□ 0.55
SOX2-OT-239ENST00000626619 ADRA2BP18089 450 aa18.49■□□□□ 0.55
SOX2-OT-239ENST00000626619 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
SOX2-OT-239ENST00000626619 IL17REQ8NFR9 667 aa18.49■□□□□ 0.55
SOX2-OT-239ENST00000626619 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
SOX2-OT-239ENST00000626619 CRKLP46109 303 aaKnown RBP18.48■□□□□ 0.55
SOX2-OT-239ENST00000626619 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
SOX2-OT-239ENST00000626619 DNAJC10Q8IXB1 793 aa18.48■□□□□ 0.55
SOX2-OT-239ENST00000626619 KCPQ6ZWJ8 1503 aa18.48■□□□□ 0.55
SOX2-OT-239ENST00000626619 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
SOX2-OT-239ENST00000626619 ADAMTS7Q9UKP4 1686 aa18.47■□□□□ 0.55
SOX2-OT-239ENST00000626619 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
SOX2-OT-239ENST00000626619 CNTNAP4Q9C0A0 1308 aa18.47■□□□□ 0.55
SOX2-OT-239ENST00000626619 TJP1Q07157 1748 aa18.46■□□□□ 0.55
SOX2-OT-239ENST00000626619 UTRNP46939 3433 aa18.46■□□□□ 0.55
SOX2-OT-239ENST00000626619 WWC3Q9ULE0 1092 aa18.46■□□□□ 0.55
SOX2-OT-239ENST00000626619 RTCBQ9Y3I0 505 aaKnown RBP18.46■□□□□ 0.55
SOX2-OT-239ENST00000626619 YY1P25490 414 aa18.45■□□□□ 0.54
SOX2-OT-239ENST00000626619 INTS5Q6P9B9 1019 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-239ENST00000626619 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
SOX2-OT-239ENST00000626619 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-239ENST00000626619 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-239ENST00000626619 SRP68Q9UHB9 627 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-239ENST00000626619 COL5A3P25940 1745 aaPredicted RBP18.45■□□□□ 0.54
SOX2-OT-239ENST00000626619 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
SOX2-OT-239ENST00000626619 RPS6KA4O75676 772 aa18.44■□□□□ 0.54
SOX2-OT-239ENST00000626619 RC3H1Q5TC82 1133 aaKnown RBP18.44■□□□□ 0.54
SOX2-OT-239ENST00000626619 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
SOX2-OT-239ENST00000626619 GOLGB1Q14789 3259 aaKnown RBP18.44■□□□□ 0.54
SOX2-OT-239ENST00000626619 KCNQ3O43525 872 aa18.43■□□□□ 0.54
SOX2-OT-239ENST00000626619 YBX3P16989 372 aaKnown RBP eCLIP18.43■□□□□ 0.54
SOX2-OT-239ENST00000626619 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
SOX2-OT-239ENST00000626619 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
SOX2-OT-239ENST00000626619 ZNF831Q5JPB2 1677 aa18.43■□□□□ 0.54
SOX2-OT-239ENST00000626619 MMP10P09238 476 aa18.42■□□□□ 0.54
SOX2-OT-239ENST00000626619 GYS1P13807 737 aa18.42■□□□□ 0.54
SOX2-OT-239ENST00000626619 DCTN1Q14203 1278 aa18.42■□□□□ 0.54
SOX2-OT-239ENST00000626619 GPR162Q16538 588 aa18.41■□□□□ 0.54
SOX2-OT-239ENST00000626619 MCM10Q7L590 875 aa18.41■□□□□ 0.54
SOX2-OT-239ENST00000626619 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
SOX2-OT-239ENST00000626619 MYH14Q7Z406 1995 aaKnown RBP18.41■□□□□ 0.54
SOX2-OT-239ENST00000626619 DCAF8L1A6NGE4 600 aa18.4■□□□□ 0.54
SOX2-OT-239ENST00000626619 CYP19A1P11511 503 aaPredicted RBP18.4■□□□□ 0.54
SOX2-OT-239ENST00000626619 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
SOX2-OT-239ENST00000626619 CCDC87Q9NVE4 849 aa18.4■□□□□ 0.54
SOX2-OT-239ENST00000626619 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
SOX2-OT-239ENST00000626619 CICQ96RK0 1608 aaPredicted RBP18.39■□□□□ 0.53
SOX2-OT-239ENST00000626619 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
SOX2-OT-239ENST00000626619 TEFQ10587 303 aa18.39■□□□□ 0.53
SOX2-OT-239ENST00000626619 FCHSD2O94868 740 aa18.38■□□□□ 0.53
SOX2-OT-239ENST00000626619 RFC4P35249 363 aa18.38■□□□□ 0.53
SOX2-OT-239ENST00000626619 FKBP8Q14318 412 aa18.38■□□□□ 0.53
SOX2-OT-239ENST00000626619 ZNF790Q6PG37 636 aa18.37■□□□□ 0.53
SOX2-OT-239ENST00000626619 SOS1Q07889 1333 aaPredicted RBP18.37■□□□□ 0.53
SOX2-OT-239ENST00000626619 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-239ENST00000626619 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
SOX2-OT-239ENST00000626619 PRAMEF22A3QJZ6 481 aa18.36■□□□□ 0.53
SOX2-OT-239ENST00000626619 DDR1Q08345 913 aa18.36■□□□□ 0.53
SOX2-OT-239ENST00000626619 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
SOX2-OT-239ENST00000626619 CD2APQ9Y5K6 639 aa18.36■□□□□ 0.53
SOX2-OT-239ENST00000626619 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
SOX2-OT-239ENST00000626619 THUMPD2Q9BTF0 503 aaKnown RBP18.35■□□□□ 0.53
SOX2-OT-239ENST00000626619 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
SOX2-OT-239ENST00000626619 HEG1Q9ULI3 1381 aa18.34■□□□□ 0.53
SOX2-OT-239ENST00000626619 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
SOX2-OT-239ENST00000626619 USPL1Q5W0Q7 1092 aa18.34■□□□□ 0.53
SOX2-OT-239ENST00000626619 COL15A1P39059 1388 aa18.33■□□□□ 0.53
SOX2-OT-239ENST00000626619 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.53
SOX2-OT-239ENST00000626619 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
SOX2-OT-239ENST00000626619 PIP4K2AP48426 406 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms