RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PPP1R1BQ9UD71 204 aaPredicted RBP29.99■■■□□ 2.39
SF1-220ENST00000626028 FLAD1Q8NFF5 587 aa29.98■■■□□ 2.39
SF1-220ENST00000626028 PTGER2P43116 358 aa29.97■■■□□ 2.39
SF1-220ENST00000626028 MRC1P22897 1456 aa29.97■■■□□ 2.39
SF1-220ENST00000626028 COL5A3P25940 1745 aaPredicted RBP29.96■■■□□ 2.39
SF1-220ENST00000626028 CICQ96RK0 1608 aaPredicted RBP29.96■■■□□ 2.39
SF1-220ENST00000626028 MTHFSDQ2M296 383 aaKnown RBP29.94■■■□□ 2.38
SF1-220ENST00000626028 SGIP1Q9BQI5 828 aa29.94■■■□□ 2.38
SF1-220ENST00000626028 GAS2L2Q8NHY3 880 aa29.93■■■□□ 2.38
SF1-220ENST00000626028 ATF5Q9Y2D1 282 aaPredicted RBP29.93■■■□□ 2.38
SF1-220ENST00000626028 NFATC2IPQ8NCF5 419 aa29.92■■■□□ 2.38
SF1-220ENST00000626028 ATP6V1AP38606 617 aa29.91■■■□□ 2.38
SF1-220ENST00000626028 RALBP1Q15311 655 aa29.91■■■□□ 2.38
SF1-220ENST00000626028 AK7Q96M32 723 aa29.91■■■□□ 2.38
SF1-220ENST00000626028 FCHSD2O94868 740 aa29.9■■■□□ 2.38
SF1-220ENST00000626028 RSPH6AQ9H0K4 717 aa29.9■■■□□ 2.38
SF1-220ENST00000626028 SLC52A2Q9HAB3 445 aa29.9■■■□□ 2.38
SF1-220ENST00000626028 RNMTO43148 476 aaKnown RBP29.89■■■□□ 2.38
SF1-220ENST00000626028 MAP3K5Q99683 1374 aa29.88■■■□□ 2.37
SF1-220ENST00000626028 SIPA1L3O60292 1781 aaPredicted RBP29.87■■■□□ 2.37
SF1-220ENST00000626028 U2AF1L5P0DN76 240 aaPredicted RBP29.87■■■□□ 2.37
SF1-220ENST00000626028 SSFA2P28290 1259 aa29.87■■■□□ 2.37
SF1-220ENST00000626028 U2AF1Q01081 240 aaKnown RBP eCLIP29.87■■■□□ 2.371e-19■■■■■ 60.2
SF1-220ENST00000626028 DDX10Q13206 875 aaKnown RBP29.87■■■□□ 2.37
SF1-220ENST00000626028 COL23A1Q86Y22 540 aaPredicted RBP29.87■■■□□ 2.37
SF1-220ENST00000626028 ITPK1Q13572 414 aa29.86■■■□□ 2.37
SF1-220ENST00000626028 LINC00116Q8NCU8 138 aa29.86■■■□□ 2.37
SF1-220ENST00000626028 LGR6Q9HBX8 967 aa29.86■■■□□ 2.37
SF1-220ENST00000626028 GNAT3A8MTJ3 354 aa29.85■■■□□ 2.37
SF1-220ENST00000626028 POLD1P28340 1107 aa29.85■■■□□ 2.37
SF1-220ENST00000626028 PRKAR2BP31323 418 aa29.85■■■□□ 2.37
SF1-220ENST00000626028 UBR2Q8IWV8 1755 aa29.85■■■□□ 2.37
SF1-220ENST00000626028 RC3H1Q5TC82 1133 aaKnown RBP29.84■■■□□ 2.37
SF1-220ENST00000626028 ARXQ96QS3 562 aa29.84■■■□□ 2.37
SF1-220ENST00000626028 RBM42Q9BTD8 480 aaKnown RBP29.84■■■□□ 2.37
SF1-220ENST00000626028 MYH14Q7Z406 1995 aaKnown RBP29.84■■■□□ 2.37
SF1-220ENST00000626028 TJP1Q07157 1748 aa29.82■■■□□ 2.36
SF1-220ENST00000626028 SLC4A9Q96Q91 983 aa29.82■■■□□ 2.36
SF1-220ENST00000626028 CNTNAP4Q9C0A0 1308 aa29.81■■■□□ 2.36
SF1-220ENST00000626028 MSH5O43196 834 aa29.81■■■□□ 2.36
SF1-220ENST00000626028 PHACTR3Q96KR7 559 aa29.8■■■□□ 2.36
SF1-220ENST00000626028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.79■■■□□ 2.36
SF1-220ENST00000626028 CEMIPQ8WUJ3 1361 aa29.78■■■□□ 2.36
SF1-220ENST00000626028 PTCD1O75127 700 aaKnown RBP29.78■■■□□ 2.36
SF1-220ENST00000626028 DLG5Q8TDM6 1919 aa29.78■■■□□ 2.36
SF1-220ENST00000626028 GNPATO15228 680 aa29.77■■■□□ 2.36
SF1-220ENST00000626028 ADRA2BP18089 450 aa29.77■■■□□ 2.36
SF1-220ENST00000626028 PNNQ9H307 717 aaKnown RBP29.77■■■□□ 2.36
SF1-220ENST00000626028 NEFMP07197 916 aa29.76■■■□□ 2.35
SF1-220ENST00000626028 TEFQ10587 303 aa29.76■■■□□ 2.35
SF1-220ENST00000626028 IL17REQ8NFR9 667 aa29.76■■■□□ 2.35
SF1-220ENST00000626028 FHDC1Q9C0D6 1143 aaPredicted RBP29.76■■■□□ 2.35
SF1-220ENST00000626028 RTCBQ9Y3I0 505 aaKnown RBP29.76■■■□□ 2.35
SF1-220ENST00000626028 KCPQ6ZWJ8 1503 aa29.76■■■□□ 2.35
SF1-220ENST00000626028 MYBBP1AQ9BQG0 1328 aaKnown RBP29.75■■■□□ 2.35
SF1-220ENST00000626028 DCAF8L1A6NGE4 600 aa29.75■■■□□ 2.35
SF1-220ENST00000626028 HTATSF1O43719 755 aaKnown RBP29.75■■■□□ 2.35
SF1-220ENST00000626028 VSIG10Q8N0Z9 540 aa29.75■■■□□ 2.35
SF1-220ENST00000626028 SYT17Q9BSW7 474 aa29.75■■■□□ 2.35
SF1-220ENST00000626028 AMIGO3Q86WK7 504 aa29.73■■■□□ 2.35
SF1-220ENST00000626028 C4AP0C0L4 1744 aa29.73■■■□□ 2.35
SF1-220ENST00000626028 RPS6KA4O75676 772 aa29.72■■■□□ 2.35
SF1-220ENST00000626028 PHF14O94880 888 aa29.72■■■□□ 2.35
SF1-220ENST00000626028 TRAPPC3LQ5T215 181 aa29.71■■■□□ 2.35
SF1-220ENST00000626028 RTF1Q92541 710 aaKnown RBP29.71■■■□□ 2.35
SF1-220ENST00000626028 TTC5Q8N0Z6 440 aa29.7■■■□□ 2.35
SF1-220ENST00000626028 CRKLP46109 303 aaKnown RBP29.68■■■□□ 2.34
SF1-220ENST00000626028 SLC39A6Q13433 755 aa29.68■■■□□ 2.34
SF1-220ENST00000626028 ZNF790Q6PG37 636 aa29.67■■■□□ 2.34
SF1-220ENST00000626028 PLEKHF1Q96S99 279 aa29.67■■■□□ 2.34
SF1-220ENST00000626028 MSL1Q68DK7 614 aa29.65■■■□□ 2.34
SF1-220ENST00000626028 ARHGEF1Q92888 912 aaKnown RBP29.64■■■□□ 2.34
SF1-220ENST00000626028 TEX13AQ9BXU3 409 aaPredicted RBP29.64■■■□□ 2.34
SF1-220ENST00000626028 CYP19A1P11511 503 aaPredicted RBP29.63■■■□□ 2.33
SF1-220ENST00000626028 RFC4P35249 363 aa29.63■■■□□ 2.33
SF1-220ENST00000626028 DNAJC10Q8IXB1 793 aa29.63■■■□□ 2.33
SF1-220ENST00000626028 NLGN1Q8N2Q7 840 aa29.63■■■□□ 2.33
SF1-220ENST00000626028 PRKRIP1Q9H875 184 aaPredicted RBP29.63■■■□□ 2.33
SF1-220ENST00000626028 CCDC87Q9NVE4 849 aa29.63■■■□□ 2.33
SF1-220ENST00000626028 INTS5Q6P9B9 1019 aaKnown RBP29.62■■■□□ 2.33
SF1-220ENST00000626028 CHD4Q14839 1912 aa29.61■■■□□ 2.33
SF1-220ENST00000626028 BTBD11A6QL63 1104 aa29.61■■■□□ 2.33
SF1-220ENST00000626028 SMIM5Q71RC9 77 aa29.61■■■□□ 2.33
SF1-220ENST00000626028 CD2APQ9Y5K6 639 aa29.61■■■□□ 2.33
SF1-220ENST00000626028 MAPK8IP3Q9UPT6 1336 aa29.61■■■□□ 2.33
SF1-220ENST00000626028 HEG1Q9ULI3 1381 aa29.61■■■□□ 2.33
SF1-220ENST00000626028 KIF13BQ9NQT8 1826 aa29.6■■■□□ 2.33
SF1-220ENST00000626028 STARD3NLO95772 234 aa29.6■■■□□ 2.33
SF1-220ENST00000626028 NFE2L2Q16236 605 aa29.59■■■□□ 2.33
SF1-220ENST00000626028 ZNF496Q96IT1 587 aaPredicted RBP29.59■■■□□ 2.33
SF1-220ENST00000626028 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
SF1-220ENST00000626028 MCM10Q7L590 875 aa29.58■■■□□ 2.33
SF1-220ENST00000626028 SOS1Q07889 1333 aaPredicted RBP29.56■■■□□ 2.32
SF1-220ENST00000626028 USP42Q9H9J4 1324 aaKnown RBP29.55■■■□□ 2.32
SF1-220ENST00000626028 ZNF316A6NFI3 1004 aaPredicted RBP29.55■■■□□ 2.32
SF1-220ENST00000626028 GYS1P13807 737 aa29.55■■■□□ 2.32
SF1-220ENST00000626028 TAF7Q15545 349 aaPredicted RBP29.55■■■□□ 2.32
SF1-220ENST00000626028 KLHL34Q8N239 644 aa29.55■■■□□ 2.32
SF1-220ENST00000626028 KDM3BQ7LBC6 1761 aa29.54■■■□□ 2.32
SF1-220ENST00000626028 MMP10P09238 476 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms