RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 SIK1P57059 783 aa24.8■■□□□ 1.56
PCDHB5-202ENST00000623915 CD2APQ9Y5K6 639 aa24.8■■□□□ 1.56
PCDHB5-202ENST00000623915 C1QTNF8P60827 252 aa24.79■■□□□ 1.56
PCDHB5-202ENST00000623915 ASAP1Q9ULH1 1129 aa24.79■■□□□ 1.56
PCDHB5-202ENST00000623915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.78■■□□□ 1.56
PCDHB5-202ENST00000623915 DDX10Q13206 875 aaKnown RBP24.78■■□□□ 1.56
PCDHB5-202ENST00000623915 ITPK1Q13572 414 aa24.78■■□□□ 1.56
PCDHB5-202ENST00000623915 IFNL2Q8IZJ0 200 aa24.78■■□□□ 1.56
PCDHB5-202ENST00000623915 TMOD3Q9NYL9 352 aa24.78■■□□□ 1.56
PCDHB5-202ENST00000623915 GRIN3BO60391 1043 aa24.77■■□□□ 1.56
PCDHB5-202ENST00000623915 PHF14O94880 888 aa24.77■■□□□ 1.56
PCDHB5-202ENST00000623915 ZNF316A6NFI3 1004 aaPredicted RBP24.76■■□□□ 1.55
PCDHB5-202ENST00000623915 SSFA2P28290 1259 aa24.76■■□□□ 1.55
PCDHB5-202ENST00000623915 PPP2R1AP30153 589 aa24.76■■□□□ 1.55
PCDHB5-202ENST00000623915 RALBP1Q15311 655 aa24.76■■□□□ 1.55
PCDHB5-202ENST00000623915 ATG3Q9NT62 314 aa24.75■■□□□ 1.55
PCDHB5-202ENST00000623915 ZNF831Q5JPB2 1677 aa24.73■■□□□ 1.55
PCDHB5-202ENST00000623915 DIAPH1O60610 1272 aaKnown RBP24.73■■□□□ 1.55
PCDHB5-202ENST00000623915 KDM6AO15550 1401 aaPredicted RBP24.71■■□□□ 1.55
PCDHB5-202ENST00000623915 ATP6V1AP38606 617 aa24.71■■□□□ 1.55
PCDHB5-202ENST00000623915 COL5A3P25940 1745 aaPredicted RBP24.7■■□□□ 1.54
PCDHB5-202ENST00000623915 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
PCDHB5-202ENST00000623915 GNPATO15228 680 aa24.7■■□□□ 1.54
PCDHB5-202ENST00000623915 GIGYF1O75420 1035 aaPredicted RBP24.7■■□□□ 1.54
PCDHB5-202ENST00000623915 SLC4A9Q96Q91 983 aa24.7■■□□□ 1.54
PCDHB5-202ENST00000623915 CFAP53Q96M91 514 aa24.69■■□□□ 1.54
PCDHB5-202ENST00000623915 ATP10DQ9P241 1426 aa24.69■■□□□ 1.54
PCDHB5-202ENST00000623915 ADCY9O60503 1353 aa24.68■■□□□ 1.54
PCDHB5-202ENST00000623915 CEP350Q5VT06 3117 aa24.68■■□□□ 1.54
PCDHB5-202ENST00000623915 ERVV-2B6SEH9 535 aa24.67■■□□□ 1.54
PCDHB5-202ENST00000623915 AMOTQ4VCS5 1084 aa24.67■■□□□ 1.54
PCDHB5-202ENST00000623915 KIAA1551Q9HCM1 1747 aa24.66■■□□□ 1.54
PCDHB5-202ENST00000623915 DCAF5Q96JK2 942 aa24.66■■□□□ 1.54
PCDHB5-202ENST00000623915 KIF13BQ9NQT8 1826 aa24.65■■□□□ 1.54
PCDHB5-202ENST00000623915 AEBP1Q8IUX7 1158 aa24.65■■□□□ 1.54
PCDHB5-202ENST00000623915 SULT6B1Q6IMI4 303 aa24.64■■□□□ 1.54
PCDHB5-202ENST00000623915 HSP90AB1P08238 724 aaKnown RBP24.63■■□□□ 1.53
PCDHB5-202ENST00000623915 PLEKHO1Q53GL0 409 aaPredicted RBP24.63■■□□□ 1.53
PCDHB5-202ENST00000623915 ZNF530Q6P9A1 599 aaPredicted RBP24.63■■□□□ 1.53
PCDHB5-202ENST00000623915 WWC3Q9ULE0 1092 aa24.63■■□□□ 1.53
PCDHB5-202ENST00000623915 CICQ96RK0 1608 aaPredicted RBP24.63■■□□□ 1.53
PCDHB5-202ENST00000623915 MYBBP1AQ9BQG0 1328 aaKnown RBP24.62■■□□□ 1.53
PCDHB5-202ENST00000623915 MYH14Q7Z406 1995 aaKnown RBP24.62■■□□□ 1.53
PCDHB5-202ENST00000623915 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
PCDHB5-202ENST00000623915 C4AP0C0L4 1744 aa24.61■■□□□ 1.53
PCDHB5-202ENST00000623915 MMP10P09238 476 aa24.61■■□□□ 1.53
PCDHB5-202ENST00000623915 NUDCQ9Y266 331 aa24.61■■□□□ 1.53
PCDHB5-202ENST00000623915 PXDNLA1KZ92 1463 aa24.61■■□□□ 1.53
PCDHB5-202ENST00000623915 ADAMTS7Q9UKP4 1686 aa24.61■■□□□ 1.53
PCDHB5-202ENST00000623915 CNTNAP4Q9C0A0 1308 aa24.61■■□□□ 1.53
PCDHB5-202ENST00000623915 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
PCDHB5-202ENST00000623915 RC3H1Q5TC82 1133 aaKnown RBP24.59■■□□□ 1.53
PCDHB5-202ENST00000623915 RTCBQ9Y3I0 505 aaKnown RBP24.59■■□□□ 1.53
PCDHB5-202ENST00000623915 C10orf71Q711Q0 1435 aa24.59■■□□□ 1.53
PCDHB5-202ENST00000623915 SCN11AQ9UI33 1791 aa24.58■■□□□ 1.53
PCDHB5-202ENST00000623915 TJP1Q07157 1748 aa24.58■■□□□ 1.52
PCDHB5-202ENST00000623915 VIRMAQ69YN4 1812 aaKnown RBP24.57■■□□□ 1.52
PCDHB5-202ENST00000623915 CABP4P57796 275 aa24.57■■□□□ 1.52
PCDHB5-202ENST00000623915 CNGB1Q14028 1251 aaPredicted RBP24.57■■□□□ 1.52
PCDHB5-202ENST00000623915 TRAPPC3LQ5T215 181 aa24.57■■□□□ 1.52
PCDHB5-202ENST00000623915 ARHGEF1Q92888 912 aaKnown RBP24.57■■□□□ 1.52
PCDHB5-202ENST00000623915 N4BP2Q86UW6 1770 aaPredicted RBP24.57■■□□□ 1.52
PCDHB5-202ENST00000623915 FCHSD2O94868 740 aa24.56■■□□□ 1.52
PCDHB5-202ENST00000623915 ADRA2BP18089 450 aa24.56■■□□□ 1.52
PCDHB5-202ENST00000623915 RPS6KA4O75676 772 aa24.55■■□□□ 1.52
PCDHB5-202ENST00000623915 GYS1P13807 737 aa24.55■■□□□ 1.52
PCDHB5-202ENST00000623915 NLGN1Q8N2Q7 840 aa24.54■■□□□ 1.52
PCDHB5-202ENST00000623915 RSPH6AQ9H0K4 717 aa24.54■■□□□ 1.52
PCDHB5-202ENST00000623915 HMOX1P09601 288 aa24.53■■□□□ 1.52
PCDHB5-202ENST00000623915 C1orf141Q5JVX7 400 aa24.53■■□□□ 1.52
PCDHB5-202ENST00000623915 GPBP1L1Q9HC44 474 aaPredicted RBP24.53■■□□□ 1.52
PCDHB5-202ENST00000623915 BRCA1P38398 1863 aaKnown RBP24.53■■□□□ 1.52
PCDHB5-202ENST00000623915 NFATC2IPQ8NCF5 419 aa24.52■■□□□ 1.52
PCDHB5-202ENST00000623915 U2SURPO15042 1029 aaKnown RBP24.51■■□□□ 1.51
PCDHB5-202ENST00000623915 PTCD1O75127 700 aaKnown RBP24.51■■□□□ 1.51
PCDHB5-202ENST00000623915 AKAP4Q5JQC9 854 aa24.51■■□□□ 1.51
PCDHB5-202ENST00000623915 MRC1P22897 1456 aa24.51■■□□□ 1.51
PCDHB5-202ENST00000623915 TGFB2P61812 414 aa24.5■■□□□ 1.51
PCDHB5-202ENST00000623915 ZNF526Q8TF50 670 aaPredicted RBP24.5■■□□□ 1.51
PCDHB5-202ENST00000623915 RFC4P35249 363 aa24.49■■□□□ 1.51
PCDHB5-202ENST00000623915 CRKLP46109 303 aaKnown RBP24.49■■□□□ 1.51
PCDHB5-202ENST00000623915 A0A0G2JLW4 131 aa24.48■■□□□ 1.51
PCDHB5-202ENST00000623915 U2AF1L5P0DN76 240 aaPredicted RBP24.47■■□□□ 1.51
PCDHB5-202ENST00000623915 U2AF1Q01081 240 aaKnown RBP eCLIP24.47■■□□□ 1.51
PCDHB5-202ENST00000623915 MTHFSDQ2M296 383 aaKnown RBP24.47■■□□□ 1.51
PCDHB5-202ENST00000623915 GAS2L2Q8NHY3 880 aa24.47■■□□□ 1.51
PCDHB5-202ENST00000623915 USP42Q9H9J4 1324 aaKnown RBP24.46■■□□□ 1.51
PCDHB5-202ENST00000623915 CCDC87Q9NVE4 849 aa24.46■■□□□ 1.51
PCDHB5-202ENST00000623915 SRP68Q9UHB9 627 aaKnown RBP24.46■■□□□ 1.51
PCDHB5-202ENST00000623915 DPEP1P16444 411 aa24.45■■□□□ 1.5
PCDHB5-202ENST00000623915 PRKAR2BP31323 418 aa24.45■■□□□ 1.5
PCDHB5-202ENST00000623915 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
PCDHB5-202ENST00000623915 INTS5Q6P9B9 1019 aaKnown RBP24.44■■□□□ 1.5
PCDHB5-202ENST00000623915 SLC52A2Q9HAB3 445 aa24.44■■□□□ 1.5
PCDHB5-202ENST00000623915 BCS1LQ9Y276 419 aa24.44■■□□□ 1.5
PCDHB5-202ENST00000623915 PARP3Q9Y6F1 533 aa24.44■■□□□ 1.5
PCDHB5-202ENST00000623915 KCPQ6ZWJ8 1503 aa24.44■■□□□ 1.5
PCDHB5-202ENST00000623915 SIPA1L3O60292 1781 aaPredicted RBP24.44■■□□□ 1.5
PCDHB5-202ENST00000623915 KIF3CO14782 793 aa24.43■■□□□ 1.5
PCDHB5-202ENST00000623915 KCNA3P22001 575 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms