RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PDE3AQ14432 1141 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 C8orf37Q96NL8 207 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 RTEL1Q9NZ71 1219 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 SDF4Q9BRK5 362 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 ZNF408Q9H9D4 720 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 INTS3Q68E01 1043 aaKnown RBP7.33□□□□□ -1.24
CDKL5-205ENST00000623535 NACA2Q9H009 215 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 ZNF530Q6P9A1 599 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-205ENST00000623535 MNS1Q8NEH6 495 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 GABPB2Q8TAK5 448 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-205ENST00000623535 XRCC6P12956 609 aaKnown RBP eCLIP7.33□□□□□ -1.24
CDKL5-205ENST00000623535 IMPG2Q9BZV3 1241 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 TSPYL2Q9H2G4 693 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-205ENST00000623535 SH2D4AQ9H788 454 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 ZNF397Q8NF99 534 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-205ENST00000623535 NUP133Q8WUM0 1156 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 NCAPGQ9BPX3 1015 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 SLC5A1P13866 664 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 LMAN1P49257 510 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 EXOC4Q96A65 974 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 TDRD9Q8NDG6 1382 aaKnown RBP7.33□□□□□ -1.24
CDKL5-205ENST00000623535 GTF2F1P35269 517 aaKnown RBP eCLIP7.33□□□□□ -1.242e-6■■■■□ 23.7
CDKL5-205ENST00000623535 GTF3C6Q969F1 213 aa7.33□□□□□ -1.24
CDKL5-205ENST00000623535 SLC17A8Q8NDX2 589 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 SLC26A8Q96RN1 970 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 KIAA1524Q8TCG1 905 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 CCDC196A0A1B0GTZ2 297 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 SKOR2Q2VWA4 1001 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-205ENST00000623535 KINO60870 393 aaKnown RBP7.32□□□□□ -1.24
CDKL5-205ENST00000623535 CCDC178Q5BJE1 867 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 GOLGA1Q92805 767 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 LMTK3Q96Q04 1460 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 PHAXQ9H814 394 aaKnown RBP7.32□□□□□ -1.24
CDKL5-205ENST00000623535 FYCO1Q9BQS8 1478 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 OTUD6BQ8N6M0 293 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 CDCA7Q9BWT1 371 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-205ENST00000623535 ARHGAP5Q13017 1502 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 VPS37CA5D8V6 355 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-205ENST00000623535 ANKRD1Q15327 319 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 PPP1R9BQ96SB3 815 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 ORC3Q9UBD5 711 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-205ENST00000623535 NYXQ9GZU5 481 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 ABCF2Q9UG63 623 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 NFE2L2Q16236 605 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 NBPF6Q5VWK0 638 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 NBPF5PQ86XG9 351 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-205ENST00000623535 NBPF4Q96M43 638 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 CABP1Q9NZU7 370 aa7.32□□□□□ -1.24
CDKL5-205ENST00000623535 CEP112Q8N8E3 955 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 HAUS7Q99871 368 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 CASTP20810 708 aaKnown RBP7.31□□□□□ -1.24
CDKL5-205ENST00000623535 NLRP5P59047 1200 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 ELL2O00472 640 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-205ENST00000623535 RIPK4P57078 832 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 SMC1AQ14683 1233 aaKnown RBP7.31□□□□□ -1.24
CDKL5-205ENST00000623535 ERLIN1O75477 346 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 CEP63Q96MT8 703 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 CCDC39Q9UFE4 941 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 FHOD3Q2V2M9 1422 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 PPP2R3CQ969Q6 453 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 RCAN3Q9UKA8 241 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 MAP3K11Q16584 847 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 MAP3K12Q12852 859 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 EAPPQ56P03 285 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-205ENST00000623535 IQCA1Q86XH1 822 aa7.31□□□□□ -1.24
CDKL5-205ENST00000623535 RNF41Q9H4P4 317 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-205ENST00000623535 LARP1Q6PKG0 1096 aaKnown RBP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 MAP3K7O43318 606 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 CEP57L1Q8IYX8 460 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 SUPT20HQ8NEM7 779 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 EIF4E1BA6NMX2 242 aaKnown RBP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 H0YHG0 523 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 ATP2B1P20020 1258 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 PABPC4Q13310 644 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 TCHPQ9BT92 498 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 STX6O43752 255 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 TMCO3Q6UWJ1 677 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 TAF4BQ92750 862 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 KIF5BP33176 963 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 METTL24Q5JXM2 366 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 PPFIBP1Q86W92 1011 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 CTCFLQ8NI51 663 aaPredicted RBP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 ERMNQ8TAM6 284 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 LEO1Q8WVC0 666 aaPredicted RBP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 LRRC27Q9C0I9 530 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 FAM114A2Q9NRY5 505 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 SLC52A1Q9NWF4 448 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 CCDC172P0C7W6 258 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 CFAP58Q5T655 872 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 TAOK3Q9H2K8 898 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 V9GYY5 206 aaPredicted RBP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 CDC37L1Q7L3B6 337 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 RNF216Q9NWF9 866 aaPredicted RBP7.3□□□□□ -1.24
CDKL5-205ENST00000623535 PDE4BQ07343 736 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 CUL4BQ13620 913 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 CLUAP1Q96AJ1 413 aa7.3□□□□□ -1.24
CDKL5-205ENST00000623535 C1orf228Q6PIY5 440 aa7.29□□□□□ -1.24
CDKL5-205ENST00000623535 LIG1P18858 919 aa7.29□□□□□ -1.24
CDKL5-205ENST00000623535 SKIV2LQ15477 1246 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms