RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 COL9A1P20849 921 aa9.92□□□□□ -0.82
CDKL5-204ENST00000623364 TIAM2Q8IVF5 1701 aa9.92□□□□□ -0.82
CDKL5-204ENST00000623364 ANKRD36BQ8N2N9 1353 aa9.91□□□□□ -0.82
CDKL5-204ENST00000623364 IQCA1LA6NCM1 817 aa9.91□□□□□ -0.82
CDKL5-204ENST00000623364 NPM3O75607 178 aaKnown RBP9.91□□□□□ -0.82
CDKL5-204ENST00000623364 BRPF1P55201 1214 aaPredicted RBP9.91□□□□□ -0.82
CDKL5-204ENST00000623364 VPS8Q8N3P4 1428 aa9.9□□□□□ -0.82
CDKL5-204ENST00000623364 WASLO00401 505 aaPredicted RBP9.9□□□□□ -0.82
CDKL5-204ENST00000623364 AOC2O75106 756 aa9.9□□□□□ -0.82
CDKL5-204ENST00000623364 SSFA2P28290 1259 aa9.9□□□□□ -0.82
CDKL5-204ENST00000623364 PLA2G5P39877 138 aa9.9□□□□□ -0.82
CDKL5-204ENST00000623364 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
CDKL5-204ENST00000623364 POLR3AO14802 1390 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-204ENST00000623364 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
CDKL5-204ENST00000623364 FAM122AQ96E09 287 aa9.89□□□□□ -0.83
CDKL5-204ENST00000623364 SNX27Q96L92 541 aa9.89□□□□□ -0.83
CDKL5-204ENST00000623364 HPS5Q9UPZ3 1129 aa9.89□□□□□ -0.83
CDKL5-204ENST00000623364 CEP290O15078 2479 aa9.89□□□□□ -0.83
CDKL5-204ENST00000623364 EAPPQ56P03 285 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-204ENST00000623364 AMIGO3Q86WK7 504 aa9.88□□□□□ -0.83
CDKL5-204ENST00000623364 CNTROBQ8N137 903 aa9.88□□□□□ -0.83
CDKL5-204ENST00000623364 NSD2O96028 1365 aa9.88□□□□□ -0.83
CDKL5-204ENST00000623364 ACEP12821 1306 aa9.87□□□□□ -0.83
CDKL5-204ENST00000623364 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
CDKL5-204ENST00000623364 CTU1Q7Z7A3 348 aaKnown RBP9.87□□□□□ -0.83
CDKL5-204ENST00000623364 C4BP0C0L5 1744 aa9.86□□□□□ -0.83
CDKL5-204ENST00000623364 CPSF1Q10570 1443 aaKnown RBP9.86□□□□□ -0.83
CDKL5-204ENST00000623364 CCDC88AQ3V6T2 1871 aa9.86□□□□□ -0.83
CDKL5-204ENST00000623364 UBR3Q6ZT12 1888 aa9.86□□□□□ -0.83
CDKL5-204ENST00000623364 NLGN1Q8N2Q7 840 aa9.86□□□□□ -0.83
CDKL5-204ENST00000623364 NUDT16Q96DE0 195 aaKnown RBP9.86□□□□□ -0.83
CDKL5-204ENST00000623364 TAF1DQ9H5J8 278 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-204ENST00000623364 PARP3Q9Y6F1 533 aa9.86□□□□□ -0.83
CDKL5-204ENST00000623364 TAF1LQ8IZX4 1826 aa9.86□□□□□ -0.83
CDKL5-204ENST00000623364 TOGARAM1Q9Y4F4 1720 aa9.85□□□□□ -0.83
CDKL5-204ENST00000623364 DDNO94850 711 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-204ENST00000623364 NLRP6P59044 892 aa9.85□□□□□ -0.83
CDKL5-204ENST00000623364 ERFEQ4G0M1 354 aa9.85□□□□□ -0.83
CDKL5-204ENST00000623364 CIAPIN1Q6FI81 312 aa9.85□□□□□ -0.83
CDKL5-204ENST00000623364 DDX21Q9NR30 783 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDKL5-204ENST00000623364 NLRP2Q9NX02 1062 aa9.85□□□□□ -0.83
CDKL5-204ENST00000623364 RGPD5Q99666 1765 aa9.85□□□□□ -0.83
CDKL5-204ENST00000623364 SLIT3O75094 1523 aa9.84□□□□□ -0.83
CDKL5-204ENST00000623364 TMF1P82094 1093 aa9.84□□□□□ -0.83
CDKL5-204ENST00000623364 PKN2Q16513 984 aaKnown RBP9.84□□□□□ -0.83
CDKL5-204ENST00000623364 DOT1LQ8TEK3 1739 aa9.84□□□□□ -0.83
CDKL5-204ENST00000623364 PIK3C2GO75747 1445 aa9.83□□□□□ -0.84
CDKL5-204ENST00000623364 MAP1SQ66K74 1059 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-204ENST00000623364 ARHGEF25Q86VW2 580 aa9.83□□□□□ -0.84
CDKL5-204ENST00000623364 SCN4AP35499 1836 aa9.82□□□□□ -0.84
CDKL5-204ENST00000623364 CHRNA5P30532 468 aa9.82□□□□□ -0.84
CDKL5-204ENST00000623364 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
CDKL5-204ENST00000623364 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
CDKL5-204ENST00000623364 C4AP0C0L4 1744 aa9.82□□□□□ -0.84
CDKL5-204ENST00000623364 AKAP4Q5JQC9 854 aa9.81□□□□□ -0.84
CDKL5-204ENST00000623364 PNMA8AQ86V59 439 aaPredicted RBP9.81□□□□□ -0.84
CDKL5-204ENST00000623364 L3MBTL3Q96JM7 780 aaPredicted RBP9.81□□□□□ -0.84
CDKL5-204ENST00000623364 C14orf93Q9H972 538 aaKnown RBP9.81□□□□□ -0.84
CDKL5-204ENST00000623364 U3KPZ7 1027 aaPredicted RBP9.81□□□□□ -0.84
CDKL5-204ENST00000623364 PALLDQ8WX93 1383 aa9.8□□□□□ -0.84
CDKL5-204ENST00000623364 POTEHQ6S545 545 aa9.8□□□□□ -0.84
CDKL5-204ENST00000623364 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
CDKL5-204ENST00000623364 SAGE1Q9NXZ1 904 aa9.8□□□□□ -0.84
CDKL5-204ENST00000623364 GNPATO15228 680 aa9.79□□□□□ -0.84
CDKL5-204ENST00000623364 FAM50AQ14320 339 aaKnown RBP9.79□□□□□ -0.84
CDKL5-204ENST00000623364 KCNH5Q8NCM2 988 aa9.79□□□□□ -0.84
CDKL5-204ENST00000623364 HACL1Q9UJ83 578 aa9.79□□□□□ -0.84
CDKL5-204ENST00000623364 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
CDKL5-204ENST00000623364 NFKBIEO00221 500 aa9.78□□□□□ -0.84
CDKL5-204ENST00000623364 RGL3Q3MIN7 710 aa9.78□□□□□ -0.84
CDKL5-204ENST00000623364 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
CDKL5-204ENST00000623364 DICER1Q9UPY3 1922 aaKnown RBP9.78□□□□□ -0.84
CDKL5-204ENST00000623364 MKI67P46013 3256 aaKnown RBP9.77□□□□□ -0.85
CDKL5-204ENST00000623364 EPHX2P34913 555 aa9.77□□□□□ -0.85
CDKL5-204ENST00000623364 NOGQ13253 232 aa9.77□□□□□ -0.85
CDKL5-204ENST00000623364 CHRDL2Q6WN34 429 aa9.77□□□□□ -0.85
CDKL5-204ENST00000623364 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDKL5-204ENST00000623364 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.85
CDKL5-204ENST00000623364 HHIPL1Q96JK4 782 aa9.77□□□□□ -0.85
CDKL5-204ENST00000623364 SPINK5Q9NQ38 1064 aaPredicted RBP9.77□□□□□ -0.85
CDKL5-204ENST00000623364 RAPGEFL1Q9UHV5 662 aa9.77□□□□□ -0.85
CDKL5-204ENST00000623364 UNC80Q8N2C7 3258 aa9.77□□□□□ -0.85
CDKL5-204ENST00000623364 ADAMTSL1Q8N6G6 1762 aa9.76□□□□□ -0.85
CDKL5-204ENST00000623364 DSG3P32926 999 aa9.76□□□□□ -0.85
CDKL5-204ENST00000623364 CST9Q5W186 159 aa9.76□□□□□ -0.85
CDKL5-204ENST00000623364 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
CDKL5-204ENST00000623364 SMARCC1Q92922 1105 aaPredicted RBP9.76□□□□□ -0.85
CDKL5-204ENST00000623364 CABP2Q9NPB3 220 aa9.76□□□□□ -0.85
CDKL5-204ENST00000623364 H0YGN5 161 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 SOX12O15370 315 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 TRAPPC3LQ5T215 181 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 SAPCD2Q86UD0 394 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 TTLL6Q8N841 843 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
CDKL5-204ENST00000623364 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 ROCK1Q13464 1354 aa9.75□□□□□ -0.85
CDKL5-204ENST00000623364 TRPM7Q96QT4 1865 aa9.74□□□□□ -0.85
CDKL5-204ENST00000623364 HDAC9Q9UKV0 1011 aa9.74□□□□□ -0.85
CDKL5-204ENST00000623364 TTC28Q96AY4 2481 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms