RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 AK7Q96M32 723 aa12.53□□□□□ -0.4
PCDHB9-202ENST00000623266 PER1O15534 1290 aaPredicted RBP12.52□□□□□ -0.41
PCDHB9-202ENST00000623266 SSFA2P28290 1259 aa12.52□□□□□ -0.41
PCDHB9-202ENST00000623266 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
PCDHB9-202ENST00000623266 MYH14Q7Z406 1995 aaKnown RBP12.51□□□□□ -0.41
PCDHB9-202ENST00000623266 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
PCDHB9-202ENST00000623266 IL13P35225 146 aa12.51□□□□□ -0.41
PCDHB9-202ENST00000623266 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
PCDHB9-202ENST00000623266 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
PCDHB9-202ENST00000623266 GNPATO15228 680 aa12.5□□□□□ -0.41
PCDHB9-202ENST00000623266 C1QTNF8P60827 252 aa12.5□□□□□ -0.41
PCDHB9-202ENST00000623266 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
PCDHB9-202ENST00000623266 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
PCDHB9-202ENST00000623266 NFATC2IPQ8NCF5 419 aa12.5□□□□□ -0.41
PCDHB9-202ENST00000623266 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
PCDHB9-202ENST00000623266 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
PCDHB9-202ENST00000623266 AMOTQ4VCS5 1084 aa12.49□□□□□ -0.41
PCDHB9-202ENST00000623266 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
PCDHB9-202ENST00000623266 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
PCDHB9-202ENST00000623266 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
PCDHB9-202ENST00000623266 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
PCDHB9-202ENST00000623266 HSP90AB1P08238 724 aaKnown RBP12.48□□□□□ -0.41
PCDHB9-202ENST00000623266 MTHFSP49914 203 aa12.48□□□□□ -0.41
PCDHB9-202ENST00000623266 CABP4P57796 275 aa12.48□□□□□ -0.41
PCDHB9-202ENST00000623266 TRAPPC3LQ5T215 181 aa12.48□□□□□ -0.41
PCDHB9-202ENST00000623266 LGR6Q9HBX8 967 aa12.48□□□□□ -0.41
PCDHB9-202ENST00000623266 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
PCDHB9-202ENST00000623266 KDRP35968 1356 aa12.47□□□□□ -0.41
PCDHB9-202ENST00000623266 KIF7Q2M1P5 1343 aa12.47□□□□□ -0.41
PCDHB9-202ENST00000623266 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
PCDHB9-202ENST00000623266 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
PCDHB9-202ENST00000623266 COL5A3P25940 1745 aaPredicted RBP12.46□□□□□ -0.41
PCDHB9-202ENST00000623266 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
PCDHB9-202ENST00000623266 RTCBQ9Y3I0 505 aaKnown RBP12.46□□□□□ -0.41
PCDHB9-202ENST00000623266 MMP10P09238 476 aa12.45□□□□□ -0.42
PCDHB9-202ENST00000623266 GYS1P13807 737 aa12.45□□□□□ -0.42
PCDHB9-202ENST00000623266 NLGN1Q8N2Q7 840 aa12.45□□□□□ -0.42
PCDHB9-202ENST00000623266 SCN11AQ9UI33 1791 aa12.45□□□□□ -0.42
PCDHB9-202ENST00000623266 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
PCDHB9-202ENST00000623266 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
PCDHB9-202ENST00000623266 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 HMOX1P09601 288 aa12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 KCNA3P22001 575 aa12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 INTS5Q6P9B9 1019 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-202ENST00000623266 GIGYF1O75420 1035 aaPredicted RBP12.42□□□□□ -0.42
PCDHB9-202ENST00000623266 ADRA2BP18089 450 aa12.42□□□□□ -0.42
PCDHB9-202ENST00000623266 RFC4P35249 363 aa12.42□□□□□ -0.42
PCDHB9-202ENST00000623266 TGFB2P61812 414 aa12.42□□□□□ -0.42
PCDHB9-202ENST00000623266 MTHFSDQ2M296 383 aaKnown RBP12.42□□□□□ -0.42
PCDHB9-202ENST00000623266 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
PCDHB9-202ENST00000623266 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
PCDHB9-202ENST00000623266 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
PCDHB9-202ENST00000623266 RNMTO43148 476 aaKnown RBP12.41□□□□□ -0.42
PCDHB9-202ENST00000623266 TM4SF1P30408 202 aa12.41□□□□□ -0.42
PCDHB9-202ENST00000623266 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
PCDHB9-202ENST00000623266 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
PCDHB9-202ENST00000623266 TJP1Q07157 1748 aa12.4□□□□□ -0.42
PCDHB9-202ENST00000623266 ATP10DQ9P241 1426 aa12.4□□□□□ -0.42
PCDHB9-202ENST00000623266 FKBP8Q14318 412 aa12.4□□□□□ -0.42
PCDHB9-202ENST00000623266 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
PCDHB9-202ENST00000623266 SLC52A2Q9HAB3 445 aa12.4□□□□□ -0.42
PCDHB9-202ENST00000623266 C4AP0C0L4 1744 aa12.4□□□□□ -0.43
PCDHB9-202ENST00000623266 ADAMTS7Q9UKP4 1686 aa12.39□□□□□ -0.43
PCDHB9-202ENST00000623266 DIAPH1O60610 1272 aaKnown RBP12.39□□□□□ -0.43
PCDHB9-202ENST00000623266 DPEP1P16444 411 aa12.39□□□□□ -0.43
PCDHB9-202ENST00000623266 ADCY9O60503 1353 aa12.39□□□□□ -0.43
PCDHB9-202ENST00000623266 PXDNLA1KZ92 1463 aa12.39□□□□□ -0.43
PCDHB9-202ENST00000623266 CEP350Q5VT06 3117 aa12.38□□□□□ -0.43
PCDHB9-202ENST00000623266 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
PCDHB9-202ENST00000623266 CYP19A1P11511 503 aaPredicted RBP12.38□□□□□ -0.43
PCDHB9-202ENST00000623266 DDR1Q08345 913 aa12.38□□□□□ -0.43
PCDHB9-202ENST00000623266 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
PCDHB9-202ENST00000623266 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
PCDHB9-202ENST00000623266 CNGB1Q14028 1251 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-202ENST00000623266 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
PCDHB9-202ENST00000623266 IL17REQ8NFR9 667 aa12.37□□□□□ -0.43
PCDHB9-202ENST00000623266 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-202ENST00000623266 CCDC87Q9NVE4 849 aa12.37□□□□□ -0.43
PCDHB9-202ENST00000623266 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
PCDHB9-202ENST00000623266 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
PCDHB9-202ENST00000623266 GPBP1L1Q9HC44 474 aaPredicted RBP12.36□□□□□ -0.43
PCDHB9-202ENST00000623266 C10orf71Q711Q0 1435 aa12.36□□□□□ -0.43
PCDHB9-202ENST00000623266 KIF3CO14782 793 aa12.35□□□□□ -0.43
PCDHB9-202ENST00000623266 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
PCDHB9-202ENST00000623266 ARHGAP27Q6ZUM4 889 aa12.35□□□□□ -0.43
PCDHB9-202ENST00000623266 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
PCDHB9-202ENST00000623266 SOS1Q07889 1333 aaPredicted RBP12.35□□□□□ -0.43
PCDHB9-202ENST00000623266 NPC1L1Q9UHC9 1359 aa12.34□□□□□ -0.43
PCDHB9-202ENST00000623266 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
PCDHB9-202ENST00000623266 FCHSD2O94868 740 aa12.34□□□□□ -0.43
PCDHB9-202ENST00000623266 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
PCDHB9-202ENST00000623266 NARFQ9UHQ1 456 aa12.34□□□□□ -0.43
PCDHB9-202ENST00000623266 AFDNP55196 1824 aaKnown RBP12.34□□□□□ -0.43
PCDHB9-202ENST00000623266 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
PCDHB9-202ENST00000623266 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms