RNA–Protein interactions for RNA: ENST00000623256.3

LINC01727-202, Transcript of long intergenic non-protein coding RNA 1727, humanhuman

TSL 4 BASIC

Gene LINC01727, Length 1,218 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01727-202ENST00000623256 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
LINC01727-202ENST00000623256 AK7Q96M32 723 aa12.71□□□□□ -0.37
LINC01727-202ENST00000623256 ITGB4P16144 1822 aa12.71□□□□□ -0.38
LINC01727-202ENST00000623256 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
LINC01727-202ENST00000623256 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
LINC01727-202ENST00000623256 EYA1Q99502 592 aa12.7□□□□□ -0.38
LINC01727-202ENST00000623256 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
LINC01727-202ENST00000623256 WASHC2AQ641Q2 1341 aa12.69□□□□□ -0.38
LINC01727-202ENST00000623256 LOC102724428A0A0B4J2F2 783 aa12.69□□□□□ -0.38
LINC01727-202ENST00000623256 SIK1P57059 783 aa12.69□□□□□ -0.38
LINC01727-202ENST00000623256 ITPK1Q13572 414 aa12.69□□□□□ -0.38
LINC01727-202ENST00000623256 IGSF1Q8N6C5 1336 aa12.68□□□□□ -0.38
LINC01727-202ENST00000623256 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
LINC01727-202ENST00000623256 HMGB2P26583 209 aaKnown RBP12.68□□□□□ -0.38
LINC01727-202ENST00000623256 SSFA2P28290 1259 aa12.68□□□□□ -0.38
LINC01727-202ENST00000623256 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
LINC01727-202ENST00000623256 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
LINC01727-202ENST00000623256 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
LINC01727-202ENST00000623256 PHKG2P15735 406 aa12.67□□□□□ -0.38
LINC01727-202ENST00000623256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01727-202ENST00000623256 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
LINC01727-202ENST00000623256 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
LINC01727-202ENST00000623256 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
LINC01727-202ENST00000623256 KDRP35968 1356 aa12.66□□□□□ -0.38
LINC01727-202ENST00000623256 GNPATO15228 680 aa12.65□□□□□ -0.38
LINC01727-202ENST00000623256 EIF4A2Q14240 407 aaKnown RBP12.65□□□□□ -0.38
LINC01727-202ENST00000623256 ZNF526Q8TF50 670 aaPredicted RBP12.65□□□□□ -0.38
LINC01727-202ENST00000623256 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
LINC01727-202ENST00000623256 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
LINC01727-202ENST00000623256 CICQ96RK0 1608 aaPredicted RBP12.65□□□□□ -0.38
LINC01727-202ENST00000623256 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
LINC01727-202ENST00000623256 IFNL2Q8IZJ0 200 aa12.64□□□□□ -0.39
LINC01727-202ENST00000623256 PXDNLA1KZ92 1463 aa12.64□□□□□ -0.39
LINC01727-202ENST00000623256 KIAA1551Q9HCM1 1747 aa12.63□□□□□ -0.39
LINC01727-202ENST00000623256 MMP10P09238 476 aa12.63□□□□□ -0.39
LINC01727-202ENST00000623256 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
LINC01727-202ENST00000623256 KIF3CO14782 793 aa12.62□□□□□ -0.39
LINC01727-202ENST00000623256 HSPA6P17066 643 aa12.61□□□□□ -0.39
LINC01727-202ENST00000623256 TNNT2P45379 298 aaPredicted RBP12.61□□□□□ -0.39
LINC01727-202ENST00000623256 IFFO2Q5TF58 517 aa12.61□□□□□ -0.39
LINC01727-202ENST00000623256 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
LINC01727-202ENST00000623256 C10orf71Q711Q0 1435 aa12.61□□□□□ -0.39
LINC01727-202ENST00000623256 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
LINC01727-202ENST00000623256 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
LINC01727-202ENST00000623256 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
LINC01727-202ENST00000623256 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
LINC01727-202ENST00000623256 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
LINC01727-202ENST00000623256 A0A0G2JLW4 131 aa12.58□□□□□ -0.4
LINC01727-202ENST00000623256 GYS1P13807 737 aa12.58□□□□□ -0.4
LINC01727-202ENST00000623256 TRAPPC3LQ5T215 181 aa12.58□□□□□ -0.4
LINC01727-202ENST00000623256 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
LINC01727-202ENST00000623256 RTCBQ9Y3I0 505 aaKnown RBP12.58□□□□□ -0.4
LINC01727-202ENST00000623256 CNTNAP4Q9C0A0 1308 aa12.58□□□□□ -0.4
LINC01727-202ENST00000623256 TGFB2P61812 414 aa12.57□□□□□ -0.4
LINC01727-202ENST00000623256 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
LINC01727-202ENST00000623256 AEBP1Q8IUX7 1158 aa12.57□□□□□ -0.4
LINC01727-202ENST00000623256 NLGN1Q8N2Q7 840 aa12.57□□□□□ -0.4
LINC01727-202ENST00000623256 DCAF5Q96JK2 942 aa12.57□□□□□ -0.4
LINC01727-202ENST00000623256 TIMELESSQ9UNS1 1208 aa12.57□□□□□ -0.4
LINC01727-202ENST00000623256 C4AP0C0L4 1744 aa12.57□□□□□ -0.4
LINC01727-202ENST00000623256 N4BP2Q86UW6 1770 aaPredicted RBP12.56□□□□□ -0.4
LINC01727-202ENST00000623256 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
LINC01727-202ENST00000623256 DPEP1P16444 411 aa12.56□□□□□ -0.4
LINC01727-202ENST00000623256 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
LINC01727-202ENST00000623256 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
LINC01727-202ENST00000623256 HSP90AB1P08238 724 aaKnown RBP12.55□□□□□ -0.4
LINC01727-202ENST00000623256 KCNA3P22001 575 aa12.55□□□□□ -0.4
LINC01727-202ENST00000623256 ZNF530Q6P9A1 599 aaPredicted RBP12.55□□□□□ -0.4
LINC01727-202ENST00000623256 MYH14Q7Z406 1995 aaKnown RBP12.54□□□□□ -0.4
LINC01727-202ENST00000623256 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
LINC01727-202ENST00000623256 PANK3Q9H999 370 aa12.54□□□□□ -0.4
LINC01727-202ENST00000623256 CCDC87Q9NVE4 849 aa12.54□□□□□ -0.4
LINC01727-202ENST00000623256 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
LINC01727-202ENST00000623256 RFC4P35249 363 aa12.53□□□□□ -0.4
LINC01727-202ENST00000623256 CABP4P57796 275 aa12.53□□□□□ -0.4
LINC01727-202ENST00000623256 DDR1Q08345 913 aa12.53□□□□□ -0.4
LINC01727-202ENST00000623256 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
LINC01727-202ENST00000623256 SRP68Q9UHB9 627 aaKnown RBP12.53□□□□□ -0.4
LINC01727-202ENST00000623256 TJP1Q07157 1748 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
LINC01727-202ENST00000623256 FCHSD2O94868 740 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
LINC01727-202ENST00000623256 CRKLP46109 303 aaKnown RBP12.52□□□□□ -0.41
LINC01727-202ENST00000623256 MTHFSP49914 203 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 FKBP8Q14318 412 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 PARP3Q9Y6F1 533 aa12.52□□□□□ -0.41
LINC01727-202ENST00000623256 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.41
LINC01727-202ENST00000623256 ADAMTS7Q9UKP4 1686 aa12.51□□□□□ -0.41
LINC01727-202ENST00000623256 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
LINC01727-202ENST00000623256 TOMM70O94826 608 aa12.5□□□□□ -0.41
LINC01727-202ENST00000623256 IL13P35225 146 aa12.5□□□□□ -0.41
LINC01727-202ENST00000623256 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
LINC01727-202ENST00000623256 DNAJC5GQ8N7S2 189 aa12.5□□□□□ -0.41
LINC01727-202ENST00000623256 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms