RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 AMIGO3Q86WK7 504 aa21.64■■□□□ 1.05
DDB2-216ENST00000622878 LINC00116Q8NCU8 138 aa21.64■■□□□ 1.05
DDB2-216ENST00000622878 HMOX1P09601 288 aa21.63■■□□□ 1.05
DDB2-216ENST00000622878 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
DDB2-216ENST00000622878 C1orf141Q5JVX7 400 aa21.63■■□□□ 1.05
DDB2-216ENST00000622878 FLAD1Q8NFF5 587 aa21.62■■□□□ 1.05
DDB2-216ENST00000622878 SLC4A9Q96Q91 983 aa21.62■■□□□ 1.05
DDB2-216ENST00000622878 CABP4P57796 275 aa21.61■■□□□ 1.05
DDB2-216ENST00000622878 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
DDB2-216ENST00000622878 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
DDB2-216ENST00000622878 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
DDB2-216ENST00000622878 POLD1P28340 1107 aa21.6■■□□□ 1.05
DDB2-216ENST00000622878 ATP6V1AP38606 617 aa21.6■■□□□ 1.05
DDB2-216ENST00000622878 AK7Q96M32 723 aa21.6■■□□□ 1.05
DDB2-216ENST00000622878 COL5A3P25940 1745 aaPredicted RBP21.59■■□□□ 1.05
DDB2-216ENST00000622878 NFATC2IPQ8NCF5 419 aa21.59■■□□□ 1.05
DDB2-216ENST00000622878 MSH5O43196 834 aa21.58■■□□□ 1.05
DDB2-216ENST00000622878 SMIM5Q71RC9 77 aa21.58■■□□□ 1.05
DDB2-216ENST00000622878 MTHFSDQ2M296 383 aaKnown RBP21.57■■□□□ 1.04
DDB2-216ENST00000622878 MRC1P22897 1456 aa21.57■■□□□ 1.04
DDB2-216ENST00000622878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.56■■□□□ 1.04
DDB2-216ENST00000622878 SSFA2P28290 1259 aa21.56■■□□□ 1.04
DDB2-216ENST00000622878 LGR6Q9HBX8 967 aa21.56■■□□□ 1.04
DDB2-216ENST00000622878 CICQ96RK0 1608 aaPredicted RBP21.55■■□□□ 1.04
DDB2-216ENST00000622878 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
DDB2-216ENST00000622878 MSL1Q68DK7 614 aa21.55■■□□□ 1.04
DDB2-216ENST00000622878 MYH14Q7Z406 1995 aaKnown RBP21.54■■□□□ 1.04
DDB2-216ENST00000622878 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
DDB2-216ENST00000622878 DCAF8L1A6NGE4 600 aa21.53■■□□□ 1.04
DDB2-216ENST00000622878 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
DDB2-216ENST00000622878 GNPATO15228 680 aa21.53■■□□□ 1.04
DDB2-216ENST00000622878 RNMTO43148 476 aaKnown RBP21.53■■□□□ 1.04
DDB2-216ENST00000622878 PHF14O94880 888 aa21.53■■□□□ 1.04
DDB2-216ENST00000622878 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
DDB2-216ENST00000622878 TJP1Q07157 1748 aa21.52■■□□□ 1.04
DDB2-216ENST00000622878 RC3H1Q5TC82 1133 aaKnown RBP21.52■■□□□ 1.04
DDB2-216ENST00000622878 CNTNAP4Q9C0A0 1308 aa21.51■■□□□ 1.03
DDB2-216ENST00000622878 PTCD1O75127 700 aaKnown RBP21.5■■□□□ 1.03
DDB2-216ENST00000622878 NLGN2Q8NFZ4 835 aa21.5■■□□□ 1.03
DDB2-216ENST00000622878 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
DDB2-216ENST00000622878 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
DDB2-216ENST00000622878 KCPQ6ZWJ8 1503 aa21.47■■□□□ 1.03
DDB2-216ENST00000622878 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
DDB2-216ENST00000622878 PHACTR3Q96KR7 559 aa21.47■■□□□ 1.03
DDB2-216ENST00000622878 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
DDB2-216ENST00000622878 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
DDB2-216ENST00000622878 RPS6KA4O75676 772 aa21.46■■□□□ 1.03
DDB2-216ENST00000622878 ADRA2BP18089 450 aa21.46■■□□□ 1.03
DDB2-216ENST00000622878 YY1P25490 414 aa21.46■■□□□ 1.03
DDB2-216ENST00000622878 GAS2L2Q8NHY3 880 aa21.46■■□□□ 1.03
DDB2-216ENST00000622878 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
DDB2-216ENST00000622878 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
DDB2-216ENST00000622878 SLC39A6Q13433 755 aa21.45■■□□□ 1.02
DDB2-216ENST00000622878 TRAPPC3LQ5T215 181 aa21.45■■□□□ 1.02
DDB2-216ENST00000622878 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
DDB2-216ENST00000622878 ARHGEF1Q92888 912 aaKnown RBP21.45■■□□□ 1.02
DDB2-216ENST00000622878 NUDCQ9Y266 331 aa21.45■■□□□ 1.02
DDB2-216ENST00000622878 C4AP0C0L4 1744 aa21.45■■□□□ 1.02
DDB2-216ENST00000622878 GNAT3A8MTJ3 354 aa21.44■■□□□ 1.02
DDB2-216ENST00000622878 CRKLP46109 303 aaKnown RBP21.44■■□□□ 1.02
DDB2-216ENST00000622878 CD2APQ9Y5K6 639 aa21.44■■□□□ 1.02
DDB2-216ENST00000622878 CHD4Q14839 1912 aa21.43■■□□□ 1.02
DDB2-216ENST00000622878 INTS5Q6P9B9 1019 aaKnown RBP21.42■■□□□ 1.02
DDB2-216ENST00000622878 CEMIPQ8WUJ3 1361 aa21.42■■□□□ 1.02
DDB2-216ENST00000622878 FCHSD2O94868 740 aa21.41■■□□□ 1.02
DDB2-216ENST00000622878 U2AF1L5P0DN76 240 aaPredicted RBP21.41■■□□□ 1.02
DDB2-216ENST00000622878 U2AF1Q01081 240 aaKnown RBP eCLIP21.41■■□□□ 1.024e-6■■■□□ 15.6
DDB2-216ENST00000622878 DNAJC10Q8IXB1 793 aa21.41■■□□□ 1.02
DDB2-216ENST00000622878 GYS1P13807 737 aa21.4■■□□□ 1.02
DDB2-216ENST00000622878 GPR162Q16538 588 aa21.4■■□□□ 1.02
DDB2-216ENST00000622878 CYP19A1P11511 503 aaPredicted RBP21.39■■□□□ 1.01
DDB2-216ENST00000622878 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
DDB2-216ENST00000622878 MMP10P09238 476 aa21.38■■□□□ 1.01
DDB2-216ENST00000622878 RFC4P35249 363 aa21.38■■□□□ 1.01
DDB2-216ENST00000622878 NLGN1Q8N2Q7 840 aa21.38■■□□□ 1.01
DDB2-216ENST00000622878 KIF13BQ9NQT8 1826 aa21.38■■□□□ 1.01
DDB2-216ENST00000622878 YBX3P16989 372 aaKnown RBP eCLIP21.37■■□□□ 1.01
DDB2-216ENST00000622878 TEFQ10587 303 aa21.37■■□□□ 1.01
DDB2-216ENST00000622878 CCDC87Q9NVE4 849 aa21.37■■□□□ 1.01
DDB2-216ENST00000622878 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
DDB2-216ENST00000622878 USP42Q9H9J4 1324 aaKnown RBP21.35■■□□□ 1.01
DDB2-216ENST00000622878 ZNF790Q6PG37 636 aa21.35■■□□□ 1.01
DDB2-216ENST00000622878 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
DDB2-216ENST00000622878 PELP1Q8IZL8 1130 aaKnown RBP21.34■■□□□ 1.01
DDB2-216ENST00000622878 ZNF496Q96IT1 587 aaPredicted RBP21.34■■□□□ 1.01
DDB2-216ENST00000622878 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
DDB2-216ENST00000622878 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
DDB2-216ENST00000622878 TTC5Q8N0Z6 440 aa21.33■■□□□ 1.01
DDB2-216ENST00000622878 ZBTB1Q9Y2K1 713 aa21.32■■□□□ 1
DDB2-216ENST00000622878 HEG1Q9ULI3 1381 aa21.32■■□□□ 1
DDB2-216ENST00000622878 C10orf71Q711Q0 1435 aa21.31■■□□□ 1
DDB2-216ENST00000622878 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
DDB2-216ENST00000622878 GRIN3BO60391 1043 aa21.31■■□□□ 1
DDB2-216ENST00000622878 FKBP8Q14318 412 aa21.31■■□□□ 1
DDB2-216ENST00000622878 RALBP1Q15311 655 aa21.31■■□□□ 1
DDB2-216ENST00000622878 PLEKHF1Q96S99 279 aa21.31■■□□□ 1
DDB2-216ENST00000622878 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
DDB2-216ENST00000622878 MCM10Q7L590 875 aa21.3■■□□□ 1
DDB2-216ENST00000622878 PXDNLA1KZ92 1463 aa21.29■■□□□ 1
DDB2-216ENST00000622878 COL15A1P39059 1388 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms