RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 TNNT2P45379 298 aaPredicted RBP7.64□□□□□ -1.19
EBF1-211ENST00000622875 LDHDQ86WU2 507 aa7.64□□□□□ -1.19
EBF1-211ENST00000622875 ZNF316A6NFI3 1004 aaPredicted RBP7.64□□□□□ -1.19
EBF1-211ENST00000622875 FER1L6Q2WGJ9 1857 aa7.63□□□□□ -1.19
EBF1-211ENST00000622875 TOM1L2Q6ZVM7 507 aa7.63□□□□□ -1.19
EBF1-211ENST00000622875 ROCK1Q13464 1354 aa7.63□□□□□ -1.19
EBF1-211ENST00000622875 FCHSD2O94868 740 aa7.63□□□□□ -1.19
EBF1-211ENST00000622875 ANP32BQ92688 251 aaKnown RBP7.62□□□□□ -1.19
EBF1-211ENST00000622875 ACSBG1Q96GR2 724 aa7.62□□□□□ -1.19
EBF1-211ENST00000622875 COL25A1Q9BXS0 654 aaPredicted RBP7.62□□□□□ -1.19
EBF1-211ENST00000622875 BRPF1P55201 1214 aaPredicted RBP7.62□□□□□ -1.19
EBF1-211ENST00000622875 GCP02774 474 aa7.61□□□□□ -1.19
EBF1-211ENST00000622875 SNX27Q96L92 541 aa7.61□□□□□ -1.19
EBF1-211ENST00000622875 LMNB1P20700 586 aa7.61□□□□□ -1.19
EBF1-211ENST00000622875 CUL9Q8IWT3 2517 aa7.61□□□□□ -1.19
EBF1-211ENST00000622875 MSH5O43196 834 aa7.6□□□□□ -1.19
EBF1-211ENST00000622875 CCNL1Q9UK58 526 aaPredicted RBP7.6□□□□□ -1.19
EBF1-211ENST00000622875 SYNGAP1Q96PV0 1343 aa7.6□□□□□ -1.19
EBF1-211ENST00000622875 DPEP1P16444 411 aa7.6□□□□□ -1.19
EBF1-211ENST00000622875 RSPH6AQ9H0K4 717 aa7.6□□□□□ -1.19
EBF1-211ENST00000622875 SCN11AQ9UI33 1791 aa7.6□□□□□ -1.19
EBF1-211ENST00000622875 CAPNS2Q96L46 248 aa7.6□□□□□ -1.19
EBF1-211ENST00000622875 NRXN2Q9P2S2 1712 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 ERBB3P21860 1342 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 NFAT5O94916 1531 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 PAK3O75914 559 aaPredicted RBP7.59□□□□□ -1.19
EBF1-211ENST00000622875 CNGB1Q14028 1251 aaPredicted RBP7.59□□□□□ -1.19
EBF1-211ENST00000622875 SAGE1Q9NXZ1 904 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 SSFA2P28290 1259 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 HHIPL1Q96JK4 782 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 ARFGEF2Q9Y6D5 1785 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 A0A0G2JLW4 131 aa7.59□□□□□ -1.19
EBF1-211ENST00000622875 PIM2Q9P1W9 311 aa7.58□□□□□ -1.2
EBF1-211ENST00000622875 PAPPA2Q9BXP8 1791 aa7.58□□□□□ -1.2
EBF1-211ENST00000622875 NUP155O75694 1391 aa7.58□□□□□ -1.2
EBF1-211ENST00000622875 NGDNQ8NEJ9 315 aaKnown RBP7.58□□□□□ -1.2
EBF1-211ENST00000622875 ZNF219Q9P2Y4 722 aaPredicted RBP7.58□□□□□ -1.2
EBF1-211ENST00000622875 ADGRB1O14514 1584 aa7.58□□□□□ -1.2
EBF1-211ENST00000622875 L3MBTL3Q96JM7 780 aaPredicted RBP7.58□□□□□ -1.2
EBF1-211ENST00000622875 STK26Q9P289 416 aa7.58□□□□□ -1.2
EBF1-211ENST00000622875 ERBB4Q15303 1308 aa7.58□□□□□ -1.2
EBF1-211ENST00000622875 DALRD3Q5D0E6 543 aaKnown RBP7.58□□□□□ -1.2
EBF1-211ENST00000622875 NLRP13Q86W25 1043 aa7.58□□□□□ -1.2
EBF1-211ENST00000622875 COLQQ9Y215 455 aaPredicted RBP7.57□□□□□ -1.2
EBF1-211ENST00000622875 KAT6BQ8WYB5 2073 aa7.57□□□□□ -1.2
EBF1-211ENST00000622875 PKN2Q16513 984 aaKnown RBP7.57□□□□□ -1.2
EBF1-211ENST00000622875 GPR101Q96P66 508 aaPredicted RBP7.57□□□□□ -1.2
EBF1-211ENST00000622875 AKAP11Q9UKA4 1901 aa7.57□□□□□ -1.2
EBF1-211ENST00000622875 TRIM44Q96DX7 344 aaPredicted RBP7.56□□□□□ -1.2
EBF1-211ENST00000622875 OTUD5Q96G74 571 aa7.56□□□□□ -1.2
EBF1-211ENST00000622875 ADGRF5Q8IZF2 1346 aa7.56□□□□□ -1.2
EBF1-211ENST00000622875 DPY19L2Q6NUT2 758 aa7.56□□□□□ -1.2
EBF1-211ENST00000622875 CCDC87Q9NVE4 849 aa7.56□□□□□ -1.2
EBF1-211ENST00000622875 ARIH1Q9Y4X5 557 aaPredicted RBP7.56□□□□□ -1.2
EBF1-211ENST00000622875 ITGB4P16144 1822 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 BCORQ6W2J9 1755 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 POTEIP0CG38 1075 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 POTEJP0CG39 1038 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 COL9A1P20849 921 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 HPS5Q9UPZ3 1129 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 IQCA1LA6NCM1 817 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 CTU1Q7Z7A3 348 aaKnown RBP7.55□□□□□ -1.2
EBF1-211ENST00000622875 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 AXIN2Q9Y2T1 843 aa7.55□□□□□ -1.2
EBF1-211ENST00000622875 COL5A3P25940 1745 aaPredicted RBP7.55□□□□□ -1.2
EBF1-211ENST00000622875 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
EBF1-211ENST00000622875 WASLO00401 505 aaPredicted RBP7.54□□□□□ -1.2
EBF1-211ENST00000622875 BCCIPQ9P287 314 aaKnown RBP eCLIP7.54□□□□□ -1.2
EBF1-211ENST00000622875 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
EBF1-211ENST00000622875 FAM122AQ96E09 287 aa7.54□□□□□ -1.2
EBF1-211ENST00000622875 KCNQ4P56696 695 aa7.54□□□□□ -1.2
EBF1-211ENST00000622875 A0A0U1RQG5 324 aaPredicted RBP7.53□□□□□ -1.2
EBF1-211ENST00000622875 MINK1Q8N4C8 1332 aaPredicted RBP7.53□□□□□ -1.2
EBF1-211ENST00000622875 SMG6Q86US8 1419 aaKnown RBP7.53□□□□□ -1.2
EBF1-211ENST00000622875 PRAM1Q96QH2 718 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 USP47Q96K76 1375 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 LTN1O94822 1766 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 MMP10P09238 476 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 IL2RBP14784 551 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 ANP32AP39687 249 aaKnown RBP7.53□□□□□ -1.2
EBF1-211ENST00000622875 GPR153Q6NV75 609 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 VSIG10Q8N0Z9 540 aa7.53□□□□□ -1.2
EBF1-211ENST00000622875 TAF1DQ9H5J8 278 aaPredicted RBP7.53□□□□□ -1.2
EBF1-211ENST00000622875 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
EBF1-211ENST00000622875 RASSF7Q02833 373 aa7.52□□□□□ -1.21
EBF1-211ENST00000622875 ARHGEF25Q86VW2 580 aa7.52□□□□□ -1.21
EBF1-211ENST00000622875 AMIGO3Q86WK7 504 aa7.52□□□□□ -1.21
EBF1-211ENST00000622875 C14orf93Q9H972 538 aaKnown RBP7.52□□□□□ -1.21
EBF1-211ENST00000622875 PTMAP06454 111 aaKnown RBP7.52□□□□□ -1.21
EBF1-211ENST00000622875 PPARGC1BQ86YN6 1023 aaKnown RBP7.52□□□□□ -1.21
EBF1-211ENST00000622875 ABTB2Q8N961 1025 aa7.52□□□□□ -1.21
EBF1-211ENST00000622875 TMEM132EQ6IEE7 984 aa7.51□□□□□ -1.21
EBF1-211ENST00000622875 PRO3102Q9H379 93 aa7.51□□□□□ -1.21
EBF1-211ENST00000622875 NEUROD1Q13562 356 aa7.51□□□□□ -1.21
EBF1-211ENST00000622875 AFDNP55196 1824 aaKnown RBP7.51□□□□□ -1.21
EBF1-211ENST00000622875 TRIM26Q12899 539 aaPredicted RBP7.51□□□□□ -1.21
EBF1-211ENST00000622875 STXBP5LQ9Y2K9 1186 aa7.51□□□□□ -1.21
EBF1-211ENST00000622875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.5□□□□□ -1.21
EBF1-211ENST00000622875 A0A1W2PPC1 479 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms