RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 SLC16A10Q8TF71 515 aa13.81□□□□□ -0.2
PCDHGC3-207ENST00000622656 NPC1L1Q9UHC9 1359 aa13.81□□□□□ -0.2
PCDHGC3-207ENST00000622656 DCAF5Q96JK2 942 aa13.8□□□□□ -0.2
PCDHGC3-207ENST00000622656 GOLGB1Q14789 3259 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-207ENST00000622656 ZNF831Q5JPB2 1677 aa13.79□□□□□ -0.2
PCDHGC3-207ENST00000622656 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
PCDHGC3-207ENST00000622656 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 PHF14O94880 888 aa13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 ADAMTS7Q9UKP4 1686 aa13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 TJP1Q07157 1748 aa13.78□□□□□ -0.2
PCDHGC3-207ENST00000622656 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
PCDHGC3-207ENST00000622656 NFATC2IPQ8NCF5 419 aa13.77□□□□□ -0.21
PCDHGC3-207ENST00000622656 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
PCDHGC3-207ENST00000622656 AK7Q96M32 723 aa13.77□□□□□ -0.21
PCDHGC3-207ENST00000622656 MAP3K5Q99683 1374 aa13.77□□□□□ -0.21
PCDHGC3-207ENST00000622656 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
PCDHGC3-207ENST00000622656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-207ENST00000622656 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-207ENST00000622656 CABP4P57796 275 aa13.76□□□□□ -0.21
PCDHGC3-207ENST00000622656 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-207ENST00000622656 CHD4Q14839 1912 aa13.76□□□□□ -0.21
PCDHGC3-207ENST00000622656 YY1P25490 414 aa13.75□□□□□ -0.21
PCDHGC3-207ENST00000622656 POLD1P28340 1107 aa13.75□□□□□ -0.21
PCDHGC3-207ENST00000622656 C4AP0C0L4 1744 aa13.75□□□□□ -0.21
PCDHGC3-207ENST00000622656 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-207ENST00000622656 GNPATO15228 680 aa13.74□□□□□ -0.21
PCDHGC3-207ENST00000622656 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-207ENST00000622656 AKAP4Q5JQC9 854 aa13.74□□□□□ -0.21
PCDHGC3-207ENST00000622656 MRC1P22897 1456 aa13.74□□□□□ -0.21
PCDHGC3-207ENST00000622656 CICQ96RK0 1608 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-207ENST00000622656 RNMTO43148 476 aaKnown RBP13.73□□□□□ -0.21
PCDHGC3-207ENST00000622656 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-207ENST00000622656 SSFA2P28290 1259 aa13.72□□□□□ -0.21
PCDHGC3-207ENST00000622656 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
PCDHGC3-207ENST00000622656 SLC39A6Q13433 755 aa13.72□□□□□ -0.21
PCDHGC3-207ENST00000622656 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
PCDHGC3-207ENST00000622656 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
PCDHGC3-207ENST00000622656 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
PCDHGC3-207ENST00000622656 KCPQ6ZWJ8 1503 aa13.71□□□□□ -0.21
PCDHGC3-207ENST00000622656 PHACTR3Q96KR7 559 aa13.7□□□□□ -0.22
PCDHGC3-207ENST00000622656 CNTNAP4Q9C0A0 1308 aa13.69□□□□□ -0.22
PCDHGC3-207ENST00000622656 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
PCDHGC3-207ENST00000622656 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
PCDHGC3-207ENST00000622656 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-207ENST00000622656 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
PCDHGC3-207ENST00000622656 KIAA1551Q9HCM1 1747 aa13.69□□□□□ -0.22
PCDHGC3-207ENST00000622656 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 YBX3P16989 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 CRKLP46109 303 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 RC3H1Q5TC82 1133 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 DNAJC10Q8IXB1 793 aa13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
PCDHGC3-207ENST00000622656 KIF13BQ9NQT8 1826 aa13.67□□□□□ -0.22
PCDHGC3-207ENST00000622656 DLG5Q8TDM6 1919 aa13.67□□□□□ -0.22
PCDHGC3-207ENST00000622656 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
PCDHGC3-207ENST00000622656 GPR162Q16538 588 aa13.67□□□□□ -0.22
PCDHGC3-207ENST00000622656 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-207ENST00000622656 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
PCDHGC3-207ENST00000622656 GYS1P13807 737 aa13.66□□□□□ -0.22
PCDHGC3-207ENST00000622656 HMGB2P26583 209 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-207ENST00000622656 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
PCDHGC3-207ENST00000622656 SRP68Q9UHB9 627 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-207ENST00000622656 MMP10P09238 476 aa13.65□□□□□ -0.22
PCDHGC3-207ENST00000622656 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
PCDHGC3-207ENST00000622656 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
PCDHGC3-207ENST00000622656 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-207ENST00000622656 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-207ENST00000622656 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHGC3-207ENST00000622656 CD2APQ9Y5K6 639 aa13.64□□□□□ -0.23
PCDHGC3-207ENST00000622656 KCNQ3O43525 872 aa13.63□□□□□ -0.23
PCDHGC3-207ENST00000622656 GAS2L2Q8NHY3 880 aa13.63□□□□□ -0.23
PCDHGC3-207ENST00000622656 CEMIPQ8WUJ3 1361 aa13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 BRCA1P38398 1863 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 ADRA2BP18089 450 aa13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 RFC4P35249 363 aa13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-207ENST00000622656 DCTN1Q14203 1278 aa13.61□□□□□ -0.23
PCDHGC3-207ENST00000622656 FKBP8Q14318 412 aa13.61□□□□□ -0.23
PCDHGC3-207ENST00000622656 ZNF784Q8NCA9 323 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-207ENST00000622656 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
PCDHGC3-207ENST00000622656 SOS1Q07889 1333 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-207ENST00000622656 USP42Q9H9J4 1324 aaKnown RBP13.61□□□□□ -0.23
PCDHGC3-207ENST00000622656 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
PCDHGC3-207ENST00000622656 DDR1Q08345 913 aa13.6□□□□□ -0.23
PCDHGC3-207ENST00000622656 TEFQ10587 303 aa13.6□□□□□ -0.23
PCDHGC3-207ENST00000622656 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
PCDHGC3-207ENST00000622656 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
PCDHGC3-207ENST00000622656 MCM10Q7L590 875 aa13.6□□□□□ -0.23
PCDHGC3-207ENST00000622656 NLGN1Q8N2Q7 840 aa13.6□□□□□ -0.23
PCDHGC3-207ENST00000622656 FCHSD2O94868 740 aa13.59□□□□□ -0.23
PCDHGC3-207ENST00000622656 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms