RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 SCTRP47872 440 aa10.88□□□□□ -0.67
RAB28P4-201ENST00000622233 MAP7D1Q3KQU3 841 aa10.88□□□□□ -0.67
RAB28P4-201ENST00000622233 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
RAB28P4-201ENST00000622233 CEP162Q5TB80 1403 aa10.87□□□□□ -0.67
RAB28P4-201ENST00000622233 J3QL48 77 aa10.87□□□□□ -0.67
RAB28P4-201ENST00000622233 CRTC2Q53ET0 693 aaPredicted RBP10.87□□□□□ -0.67
RAB28P4-201ENST00000622233 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
RAB28P4-201ENST00000622233 MPNDQ8N594 471 aa10.87□□□□□ -0.67
RAB28P4-201ENST00000622233 CASKIN1Q8WXD9 1431 aa10.86□□□□□ -0.67
RAB28P4-201ENST00000622233 EML3Q32P44 896 aa10.86□□□□□ -0.67
RAB28P4-201ENST00000622233 FYCO1Q9BQS8 1478 aa10.86□□□□□ -0.67
RAB28P4-201ENST00000622233 KDM6BO15054 1643 aa10.85□□□□□ -0.67
RAB28P4-201ENST00000622233 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
RAB28P4-201ENST00000622233 KIAA1024Q9UPX6 916 aa10.85□□□□□ -0.67
RAB28P4-201ENST00000622233 MAGI3Q5TCQ9 1506 aa10.84□□□□□ -0.67
RAB28P4-201ENST00000622233 CLDN10P78369 228 aa10.84□□□□□ -0.67
RAB28P4-201ENST00000622233 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
RAB28P4-201ENST00000622233 CCDC116Q8IYX3 515 aa10.84□□□□□ -0.67
RAB28P4-201ENST00000622233 ZNF784Q8NCA9 323 aaPredicted RBP10.84□□□□□ -0.67
RAB28P4-201ENST00000622233 TTC37Q6PGP7 1564 aa10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 TEX14Q8IWB6 1497 aa10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 RASA1P20936 1047 aa10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 NR5A1Q13285 461 aa10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 NNTQ13423 1086 aa10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 SNIP1Q8TAD8 396 aaKnown RBP10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 ZMIZ1Q9ULJ6 1067 aa10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 NOD1Q9Y239 953 aa10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 ACIN1Q9UKV3 1341 aaKnown RBP10.83□□□□□ -0.68
RAB28P4-201ENST00000622233 CCDC18Q5T9S5 1454 aa10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 ATG7O95352 703 aa10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 STAU1O95793 577 aaKnown RBP10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 CYP4X1Q8N118 509 aa10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 OGFOD1Q8N543 542 aa10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 TOR4AQ9NXH8 423 aa10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.82□□□□□ -0.68
RAB28P4-201ENST00000622233 KIF14Q15058 1648 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L15C9J2P7 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L13C9JLJ4 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L11C9JVI0 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L21D6R901 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L18D6R9N7 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L22D6RA61 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L17D6RBQ6 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L19D6RCP7 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L20D6RJB6 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 LZTS3O60299 673 aaPredicted RBP10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 GTF2IP78347 998 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 USP17L24Q0WX57 530 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 PTK7Q13308 1070 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 STK32AQ8WU08 396 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 CD109Q6YHK3 1445 aa10.81□□□□□ -0.68
RAB28P4-201ENST00000622233 ATP5J2-PTCD1G3V325 749 aa10.8□□□□□ -0.68
RAB28P4-201ENST00000622233 ZBTB7BO15156 539 aaPredicted RBP10.8□□□□□ -0.68
RAB28P4-201ENST00000622233 LILRA1O75019 489 aa10.8□□□□□ -0.68
RAB28P4-201ENST00000622233 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
RAB28P4-201ENST00000622233 PCDHGA11Q9Y5H2 935 aa10.8□□□□□ -0.68
RAB28P4-201ENST00000622233 MYO5CQ9NQX4 1742 aa10.79□□□□□ -0.68
RAB28P4-201ENST00000622233 LOC105371045A0A1W2PR82 267 aa10.79□□□□□ -0.68
RAB28P4-201ENST00000622233 SMPD1P17405 629 aa10.79□□□□□ -0.68
RAB28P4-201ENST00000622233 ADD1P35611 737 aaKnown RBP10.79□□□□□ -0.68
RAB28P4-201ENST00000622233 ERVK-9P63128 1117 aa10.79□□□□□ -0.68
RAB28P4-201ENST00000622233 USP4Q13107 963 aa10.79□□□□□ -0.68
RAB28P4-201ENST00000622233 LARP1Q6PKG0 1096 aaKnown RBP10.79□□□□□ -0.68
RAB28P4-201ENST00000622233 TROQ12816 1431 aaPredicted RBP10.78□□□□□ -0.68
RAB28P4-201ENST00000622233 FAM196BA6NMK8 535 aa10.78□□□□□ -0.68
RAB28P4-201ENST00000622233 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
RAB28P4-201ENST00000622233 CC2D2BQ6DHV5 1058 aa10.78□□□□□ -0.68
RAB28P4-201ENST00000622233 OSBPL3Q9H4L5 887 aa10.78□□□□□ -0.68
RAB28P4-201ENST00000622233 DNAAF2Q9NVR5 837 aaKnown RBP10.78□□□□□ -0.68
RAB28P4-201ENST00000622233 COL17A1Q9UMD9 1497 aaPredicted RBP10.78□□□□□ -0.68
RAB28P4-201ENST00000622233 CFAP74Q9C0B2 1584 aa10.77□□□□□ -0.68
RAB28P4-201ENST00000622233 CBLBQ13191 982 aa10.77□□□□□ -0.69
RAB28P4-201ENST00000622233 TMEM164Q5U3C3 297 aa10.77□□□□□ -0.69
RAB28P4-201ENST00000622233 ITPKCQ96DU7 683 aa10.77□□□□□ -0.69
RAB28P4-201ENST00000622233 ZFAND3Q9H8U3 227 aa10.77□□□□□ -0.69
RAB28P4-201ENST00000622233 ARAP3Q8WWN8 1544 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 PLEKHD1A6NEE1 506 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 TMEM88BA6NKF7 163 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 DKK1O94907 266 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 MYCP01106 439 aaPredicted RBP10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 CSB-PGBD3P0DP91 1061 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 PSME1Q06323 249 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 DPYDQ12882 1025 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 TRIM50Q86XT4 487 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 TPCN2Q8NHX9 752 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 HPS1Q92902 700 aa10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 KLF16Q9BXK1 252 aaPredicted RBP10.76□□□□□ -0.69
RAB28P4-201ENST00000622233 NEO1Q92859 1461 aa10.75□□□□□ -0.69
RAB28P4-201ENST00000622233 LGR5O75473 907 aa10.75□□□□□ -0.69
RAB28P4-201ENST00000622233 PRR20EP86478 221 aa10.75□□□□□ -0.69
RAB28P4-201ENST00000622233 PRR20CP86479 221 aa10.75□□□□□ -0.69
RAB28P4-201ENST00000622233 PRR20DP86480 221 aa10.75□□□□□ -0.69
RAB28P4-201ENST00000622233 PRR20BP86481 221 aa10.75□□□□□ -0.69
RAB28P4-201ENST00000622233 PRR20AP86496 221 aa10.75□□□□□ -0.69
RAB28P4-201ENST00000622233 MYT1Q01538 1121 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms