RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 F6X3S4 739 aa11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 SOX12O15370 315 aa11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 SSFA2P28290 1259 aa11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 FLIIQ13045 1269 aa11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 IL17RAQ96F46 866 aa11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 STAP2Q9UGK3 403 aa11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 AOX1Q06278 1338 aa11.83□□□□□ -0.52
IGHV3-54-201ENST00000622166 PHRF1Q9P1Y6 1649 aaKnown RBP11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 LTN1O94822 1766 aa11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 IBTKQ9P2D0 1353 aaPredicted RBP11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 IL17REQ8NFR9 667 aa11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 GRPEL1Q9HAV7 217 aa11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
IGHV3-54-201ENST00000622166 GOLGA6L22H0YM25 854 aa11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 EPB41L2O43491 1005 aaKnown RBP11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 ST18O60284 1047 aa11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 BAG4O95429 457 aaKnown RBP11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 LRRCC1Q9C099 1032 aa11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 SRCIN1Q9C0H9 1055 aa11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 LMO7Q8WWI1 1683 aa11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 NFAT5O94916 1531 aa11.81□□□□□ -0.52
IGHV3-54-201ENST00000622166 CEMIPQ8WUJ3 1361 aa11.8□□□□□ -0.52
IGHV3-54-201ENST00000622166 HOXB7P09629 217 aa11.8□□□□□ -0.52
IGHV3-54-201ENST00000622166 KCNA6P17658 529 aa11.8□□□□□ -0.52
IGHV3-54-201ENST00000622166 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
IGHV3-54-201ENST00000622166 ADGRL3Q9HAR2 1447 aa11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 APBB1O00213 710 aa11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 KLHL40Q2TBA0 621 aa11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 IP6K1Q92551 441 aa11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 ESYT1Q9BSJ8 1104 aa11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 PANK2Q9BZ23 570 aa11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 RRAGDQ9NQL2 400 aaPredicted RBP11.79□□□□□ -0.52
IGHV3-54-201ENST00000622166 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 MX1P20591 662 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 MCM2P49736 904 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 ANAPC15P60006 121 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 POLA2Q14181 598 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 GAS2L3Q86XJ1 694 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 EXOC6BQ9Y2D4 811 aa11.78□□□□□ -0.52
IGHV3-54-201ENST00000622166 PNMA6EA0A0J9YXQ4 647 aa11.77□□□□□ -0.53
IGHV3-54-201ENST00000622166 CHMLP26374 656 aa11.77□□□□□ -0.53
IGHV3-54-201ENST00000622166 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
IGHV3-54-201ENST00000622166 AK9Q5TCS8 1911 aa11.77□□□□□ -0.53
IGHV3-54-201ENST00000622166 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
IGHV3-54-201ENST00000622166 NCAPD2Q15021 1401 aa11.77□□□□□ -0.53
IGHV3-54-201ENST00000622166 MCCP23508 829 aa11.76□□□□□ -0.53
IGHV3-54-201ENST00000622166 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
IGHV3-54-201ENST00000622166 CUL4AQ13619 759 aa11.76□□□□□ -0.53
IGHV3-54-201ENST00000622166 LMBRD1Q9NUN5 540 aa11.76□□□□□ -0.53
IGHV3-54-201ENST00000622166 OVOS2A0A0G2JMS6 1433 aa11.76□□□□□ -0.53
IGHV3-54-201ENST00000622166 CRYBG1Q9Y4K1 1723 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 CLCN1P35523 988 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 ZNF445P59923 1031 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 NUTM2GQ5VZR2 741 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 ZDHHC9Q9Y397 364 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 LMTK3Q96Q04 1460 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 CAMTA1Q9Y6Y1 1673 aa11.75□□□□□ -0.53
IGHV3-54-201ENST00000622166 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
IGHV3-54-201ENST00000622166 KCNH5Q8NCM2 988 aa11.74□□□□□ -0.53
IGHV3-54-201ENST00000622166 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
IGHV3-54-201ENST00000622166 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
IGHV3-54-201ENST00000622166 DDX49Q9Y6V7 483 aaKnown RBP11.74□□□□□ -0.53
IGHV3-54-201ENST00000622166 SLIT3O75094 1523 aa11.74□□□□□ -0.53
IGHV3-54-201ENST00000622166 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 MCTP1Q6DN14 999 aa11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 ZGPATQ8N5A5 531 aaKnown RBP11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 PPP1R9BQ96SB3 815 aa11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
IGHV3-54-201ENST00000622166 ADAMTS7Q9UKP4 1686 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 NEK4P51957 841 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 BEND3Q5T5X7 828 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 PPP1R42Q7Z4L9 355 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 ARXQ96QS3 562 aa11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
IGHV3-54-201ENST00000622166 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 BRD1O95696 1058 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms