RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 CCDC183Q5T5S1 534 aa13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 NPATQ14207 1427 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 NCOA3Q9Y6Q9 1424 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 TSPOAP1O95153 1857 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 MCM5P33992 734 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 MAP3K4Q9Y6R4 1608 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 CEP152O94986 1710 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 PDCL2Q8N4E4 241 aa13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
PCDHGA11-203ENST00000622044 TCEANC2Q96MN5 208 aa13.66□□□□□ -0.22
PCDHGA11-203ENST00000622044 SPHKAPQ2M3C7 1700 aa13.66□□□□□ -0.22
PCDHGA11-203ENST00000622044 IL13P35225 146 aa13.66□□□□□ -0.22
PCDHGA11-203ENST00000622044 C16orf45Q96MC5 204 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA11-203ENST00000622044 SRCIN1Q9C0H9 1055 aa13.66□□□□□ -0.22
PCDHGA11-203ENST00000622044 MYOM2P54296 1465 aa13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 MYOM1P52179 1685 aa13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 STX6O43752 255 aa13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 PNMA6EA0A0J9YXQ4 647 aa13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 ZKSCAN1P17029 563 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 DNM1Q05193 864 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-203ENST00000622044 BRD1O95696 1058 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 CHMLP26374 656 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 PRPF40BQ6NWY9 871 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 PODXL2Q9NZ53 605 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 FLIIQ13045 1269 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 IFIT2P09913 472 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
PCDHGA11-203ENST00000622044 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 LARP1BQ659C4 914 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 C9orf78Q9NZ63 289 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 IBTKQ9P2D0 1353 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 GOLGA6L19H0YKK7 550 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 PPFIA3O75145 1194 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 ANXA1P04083 346 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 TPD52L1Q16890 204 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 POGZQ7Z3K3 1410 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 H3BQV1 296 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
PCDHGA11-203ENST00000622044 PTPRCP08575 1304 aa13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 GJB2P29033 226 aa13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 BECN2A8MW95 431 aa13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 AK2P54819 239 aa13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 WASLO00401 505 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
PCDHGA11-203ENST00000622044 SYT1P21579 422 aa13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 PUS7Q96PZ0 661 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 CCDC94Q9BW85 323 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 CYP2E1P05181 493 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 UBE2HP62256 183 aa13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 RUFY2Q8WXA3 655 aa13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 GPATCH3Q96I76 525 aa13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 SIL1Q9H173 461 aa13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 LIMCH1Q9UPQ0 1083 aa13.61□□□□□ -0.23
PCDHGA11-203ENST00000622044 LETM1O95202 739 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 YTHDC2Q9H6S0 1430 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 PPP1R42Q7Z4L9 355 aa13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 KIF1BO60333 1816 aa13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 AIMP1Q12904 312 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 FILIP1Q7Z7B0 1213 aa13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 MYRIPQ8NFW9 859 aa13.6□□□□□ -0.23
PCDHGA11-203ENST00000622044 PTGS1P23219 599 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 U2AF2P26368 475 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 TERF1P54274 439 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 KRT85P78386 507 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 PRIMPOLQ96LW4 560 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 TET3O43151 1660 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 CLEC17AQ6ZS10 378 aa13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 LUZP1Q86V48 1076 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms