RNA–Protein interactions for RNA: ENST00000621345.4

CASP7-211, Transcript of caspase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASP7, Length 2,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-211ENST00000621345 PDLIM2Q96JY6 352 aa13.58□□□□□ -0.23
CASP7-211ENST00000621345 CFAP44Q96MT7 982 aa13.58□□□□□ -0.23
CASP7-211ENST00000621345 API5Q9BZZ5 524 aaKnown RBP13.58□□□□□ -0.23
CASP7-211ENST00000621345 NOL7Q9UMY1 257 aaKnown RBP13.58□□□□□ -0.23
CASP7-211ENST00000621345 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
CASP7-211ENST00000621345 MAP2P11137 1827 aaKnown RBP13.58□□□□□ -0.24
CASP7-211ENST00000621345 UQCRHLA0A096LP55 91 aa13.57□□□□□ -0.24
CASP7-211ENST00000621345 UQCRHP07919 91 aa13.57□□□□□ -0.24
CASP7-211ENST00000621345 ANKRD44Q8N8A2 993 aa13.57□□□□□ -0.24
CASP7-211ENST00000621345 GDPD2Q9HCC8 539 aa13.57□□□□□ -0.24
CASP7-211ENST00000621345 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
CASP7-211ENST00000621345 RGS12O14924 1447 aa13.57□□□□□ -0.24
CASP7-211ENST00000621345 MCM10Q7L590 875 aa13.57□□□□□ -0.24
CASP7-211ENST00000621345 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
CASP7-211ENST00000621345 ST18O60284 1047 aa13.56□□□□□ -0.24
CASP7-211ENST00000621345 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
CASP7-211ENST00000621345 ATP7BP35670 1465 aa13.56□□□□□ -0.24
CASP7-211ENST00000621345 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
CASP7-211ENST00000621345 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
CASP7-211ENST00000621345 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.56□□□□□ -0.24
CASP7-211ENST00000621345 NEK4P51957 841 aa13.55□□□□□ -0.24
CASP7-211ENST00000621345 F6X3S4 739 aa13.55□□□□□ -0.24
CASP7-211ENST00000621345 DTNBO60941 627 aa13.55□□□□□ -0.24
CASP7-211ENST00000621345 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
CASP7-211ENST00000621345 ZKSCAN5Q9Y2L8 839 aa13.55□□□□□ -0.24
CASP7-211ENST00000621345 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
CASP7-211ENST00000621345 TMX3Q96JJ7 454 aa13.54□□□□□ -0.24
CASP7-211ENST00000621345 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
CASP7-211ENST00000621345 SLC4A10Q6U841 1118 aa13.54□□□□□ -0.24
CASP7-211ENST00000621345 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
CASP7-211ENST00000621345 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
CASP7-211ENST00000621345 CHD2O14647 1828 aaKnown RBP13.54□□□□□ -0.24
CASP7-211ENST00000621345 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
CASP7-211ENST00000621345 TSC1Q92574 1164 aa13.53□□□□□ -0.24
CASP7-211ENST00000621345 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
CASP7-211ENST00000621345 ERC2O15083 957 aa13.52□□□□□ -0.24
CASP7-211ENST00000621345 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.24
CASP7-211ENST00000621345 KCNA6P17658 529 aa13.52□□□□□ -0.24
CASP7-211ENST00000621345 G2E3Q7L622 706 aa13.52□□□□□ -0.24
CASP7-211ENST00000621345 ZNF830Q96NB3 372 aaPredicted RBP13.52□□□□□ -0.24
CASP7-211ENST00000621345 UPF3BQ9BZI7 483 aaKnown RBP13.52□□□□□ -0.24
CASP7-211ENST00000621345 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
CASP7-211ENST00000621345 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
CASP7-211ENST00000621345 SOX12O15370 315 aa13.51□□□□□ -0.25
CASP7-211ENST00000621345 REC8O95072 547 aa13.51□□□□□ -0.25
CASP7-211ENST00000621345 PDE1AP54750 535 aa13.51□□□□□ -0.25
CASP7-211ENST00000621345 SULT6B1Q6IMI4 303 aa13.51□□□□□ -0.25
CASP7-211ENST00000621345 HS1BP3Q53T59 392 aa13.5□□□□□ -0.25
CASP7-211ENST00000621345 IL25Q9H293 177 aa13.5□□□□□ -0.25
CASP7-211ENST00000621345 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
CASP7-211ENST00000621345 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
CASP7-211ENST00000621345 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
CASP7-211ENST00000621345 RPAP2Q8IXW5 612 aaPredicted RBP13.5□□□□□ -0.25
CASP7-211ENST00000621345 PRDM10Q9NQV6 1147 aa13.5□□□□□ -0.25
CASP7-211ENST00000621345 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
CASP7-211ENST00000621345 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
CASP7-211ENST00000621345 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
CASP7-211ENST00000621345 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
CASP7-211ENST00000621345 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
CASP7-211ENST00000621345 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
CASP7-211ENST00000621345 TOPAZ1Q8N9V7 1692 aa13.49□□□□□ -0.25
CASP7-211ENST00000621345 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
CASP7-211ENST00000621345 PRR36Q9H6K5 1346 aa13.48□□□□□ -0.25
CASP7-211ENST00000621345 EDC4Q6P2E9 1401 aaKnown RBP13.48□□□□□ -0.25
CASP7-211ENST00000621345 FOXO3O43524 673 aa13.48□□□□□ -0.25
CASP7-211ENST00000621345 BRD1O95696 1058 aa13.48□□□□□ -0.25
CASP7-211ENST00000621345 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
CASP7-211ENST00000621345 RILPL2Q969X0 211 aa13.48□□□□□ -0.25
CASP7-211ENST00000621345 ITSN1Q15811 1721 aa13.48□□□□□ -0.25
CASP7-211ENST00000621345 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
CASP7-211ENST00000621345 COG3Q96JB2 828 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 CCDC39Q9UFE4 941 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 NUTM2FA1L443 756 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 EIF4A2Q14240 407 aaKnown RBP13.47□□□□□ -0.25
CASP7-211ENST00000621345 ESYT1Q9BSJ8 1104 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 NWD1Q149M9 1564 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
CASP7-211ENST00000621345 MON2Q7Z3U7 1717 aa13.46□□□□□ -0.25
CASP7-211ENST00000621345 ANKARQ7Z5J8 1434 aa13.46□□□□□ -0.25
CASP7-211ENST00000621345 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.25
CASP7-211ENST00000621345 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
CASP7-211ENST00000621345 USP25Q9UHP3 1055 aa13.46□□□□□ -0.25
CASP7-211ENST00000621345 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.26
CASP7-211ENST00000621345 CHL1O00533 1208 aa13.46□□□□□ -0.26
CASP7-211ENST00000621345 MAP4K4O95819 1239 aaPredicted RBP13.46□□□□□ -0.26
CASP7-211ENST00000621345 TERF1P54274 439 aa13.46□□□□□ -0.26
CASP7-211ENST00000621345 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
CASP7-211ENST00000621345 MBD3O95983 291 aa13.45□□□□□ -0.26
CASP7-211ENST00000621345 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
CASP7-211ENST00000621345 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
CASP7-211ENST00000621345 PRDM4Q9UKN5 801 aa13.45□□□□□ -0.26
CASP7-211ENST00000621345 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
CASP7-211ENST00000621345 HSP90AB2PQ58FF8 381 aa13.44□□□□□ -0.26
CASP7-211ENST00000621345 DNTTIP2Q5QJE6 756 aaKnown RBP13.44□□□□□ -0.26
CASP7-211ENST00000621345 SASS6Q6UVJ0 657 aa13.44□□□□□ -0.26
CASP7-211ENST00000621345 CUL4AQ13619 759 aa13.44□□□□□ -0.26
CASP7-211ENST00000621345 NALCNQ8IZF0 1738 aa13.43□□□□□ -0.26
CASP7-211ENST00000621345 CHMLP26374 656 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms