RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 ATG3Q9NT62 314 aa21.67■■□□□ 1.06
SNHG28-203ENST00000621242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.06
SNHG28-203ENST00000621242 PHKG2P15735 406 aa21.66■■□□□ 1.06
SNHG28-203ENST00000621242 APLP1P51693 650 aa21.66■■□□□ 1.06
SNHG28-203ENST00000621242 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
SNHG28-203ENST00000621242 IFNL2Q8IZJ0 200 aa21.66■■□□□ 1.06
SNHG28-203ENST00000621242 BCS1LQ9Y276 419 aa21.66■■□□□ 1.06
SNHG28-203ENST00000621242 WASHC2AQ641Q2 1341 aa21.65■■□□□ 1.06
SNHG28-203ENST00000621242 A0A0G2JLW4 131 aa21.65■■□□□ 1.06
SNHG28-203ENST00000621242 TGFB2P61812 414 aa21.65■■□□□ 1.06
SNHG28-203ENST00000621242 CDCA8Q53HL2 280 aa21.65■■□□□ 1.06
SNHG28-203ENST00000621242 TOMM70O94826 608 aa21.64■■□□□ 1.05
SNHG28-203ENST00000621242 TRAPPC3LQ5T215 181 aa21.64■■□□□ 1.05
SNHG28-203ENST00000621242 BRCA1P38398 1863 aaKnown RBP21.64■■□□□ 1.05
SNHG28-203ENST00000621242 RTCBQ9Y3I0 505 aaKnown RBP21.63■■□□□ 1.05
SNHG28-203ENST00000621242 ARHGAP27Q6ZUM4 889 aa21.62■■□□□ 1.05
SNHG28-203ENST00000621242 NLGN1Q8N2Q7 840 aa21.62■■□□□ 1.05
SNHG28-203ENST00000621242 DNAJC5GQ8N7S2 189 aa21.62■■□□□ 1.05
SNHG28-203ENST00000621242 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
SNHG28-203ENST00000621242 SLC4A9Q96Q91 983 aa21.61■■□□□ 1.05
SNHG28-203ENST00000621242 NMRK2Q9NPI5 230 aa21.61■■□□□ 1.05
SNHG28-203ENST00000621242 C10orf71Q711Q0 1435 aa21.61■■□□□ 1.05
SNHG28-203ENST00000621242 KDRP35968 1356 aa21.61■■□□□ 1.05
SNHG28-203ENST00000621242 C4AP0C0L4 1744 aa21.6■■□□□ 1.05
SNHG28-203ENST00000621242 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
SNHG28-203ENST00000621242 MYH14Q7Z406 1995 aaKnown RBP21.6■■□□□ 1.05
SNHG28-203ENST00000621242 DPEP1P16444 411 aa21.6■■□□□ 1.05
SNHG28-203ENST00000621242 ARHGEF1Q92888 912 aaKnown RBP21.6■■□□□ 1.05
SNHG28-203ENST00000621242 RBM42Q9BTD8 480 aaKnown RBP21.6■■□□□ 1.05
SNHG28-203ENST00000621242 FCHSD2O94868 740 aa21.59■■□□□ 1.05
SNHG28-203ENST00000621242 CCDC87Q9NVE4 849 aa21.59■■□□□ 1.05
SNHG28-203ENST00000621242 POLKQ9UBT6 870 aa21.59■■□□□ 1.05
SNHG28-203ENST00000621242 ARFGEF1Q9Y6D6 1849 aa21.59■■□□□ 1.05
SNHG28-203ENST00000621242 WDR90Q96KV7 1748 aa21.58■■□□□ 1.05
SNHG28-203ENST00000621242 GYS1P13807 737 aa21.57■■□□□ 1.04
SNHG28-203ENST00000621242 RC3H1Q5TC82 1133 aaKnown RBP21.57■■□□□ 1.04
SNHG28-203ENST00000621242 ADRA2BP18089 450 aa21.56■■□□□ 1.04
SNHG28-203ENST00000621242 RFC4P35249 363 aa21.56■■□□□ 1.04
SNHG28-203ENST00000621242 EIF4A2Q14240 407 aaKnown RBP21.56■■□□□ 1.04
SNHG28-203ENST00000621242 PARP3Q9Y6F1 533 aa21.56■■□□□ 1.04
SNHG28-203ENST00000621242 ERVV-2B6SEH9 535 aa21.55■■□□□ 1.04
SNHG28-203ENST00000621242 RPS6KA4O75676 772 aa21.55■■□□□ 1.04
SNHG28-203ENST00000621242 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
SNHG28-203ENST00000621242 KCNA3P22001 575 aa21.54■■□□□ 1.04
SNHG28-203ENST00000621242 C9orf131Q5VYM1 1079 aa21.54■■□□□ 1.04
SNHG28-203ENST00000621242 RBM46Q8TBY0 533 aaKnown RBP21.53■■□□□ 1.04
SNHG28-203ENST00000621242 TNNT2P45379 298 aaPredicted RBP21.52■■□□□ 1.04
SNHG28-203ENST00000621242 DCAF5Q96JK2 942 aa21.52■■□□□ 1.04
SNHG28-203ENST00000621242 SBF1O95248 1867 aa21.52■■□□□ 1.03
SNHG28-203ENST00000621242 HTRA3P83110 453 aa21.51■■□□□ 1.03
SNHG28-203ENST00000621242 C16orf71Q8IYS4 520 aaPredicted RBP21.51■■□□□ 1.03
SNHG28-203ENST00000621242 PIM2Q9P1W9 311 aa21.51■■□□□ 1.03
SNHG28-203ENST00000621242 PCNTO95613 3336 aa21.51■■□□□ 1.03
SNHG28-203ENST00000621242 PLEKHG2Q9H7P9 1386 aa21.5■■□□□ 1.03
SNHG28-203ENST00000621242 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
SNHG28-203ENST00000621242 KDM6AO15550 1401 aaPredicted RBP21.49■■□□□ 1.03
SNHG28-203ENST00000621242 CABP4P57796 275 aa21.49■■□□□ 1.03
SNHG28-203ENST00000621242 KCPQ6ZWJ8 1503 aa21.49■■□□□ 1.03
SNHG28-203ENST00000621242 PLEKHO1Q53GL0 409 aaPredicted RBP21.48■■□□□ 1.03
SNHG28-203ENST00000621242 SRP68Q9UHB9 627 aaKnown RBP21.48■■□□□ 1.03
SNHG28-203ENST00000621242 PTCD1O75127 700 aaKnown RBP21.47■■□□□ 1.03
SNHG28-203ENST00000621242 DALRD3Q5D0E6 543 aaKnown RBP21.47■■□□□ 1.03
SNHG28-203ENST00000621242 ZNF530Q6P9A1 599 aaPredicted RBP21.47■■□□□ 1.03
SNHG28-203ENST00000621242 KLRG1Q96E93 195 aa21.47■■□□□ 1.03
SNHG28-203ENST00000621242 PCGF6Q9BYE7 350 aa21.47■■□□□ 1.03
SNHG28-203ENST00000621242 CRKLP46109 303 aaKnown RBP21.46■■□□□ 1.03
SNHG28-203ENST00000621242 DDR1Q08345 913 aa21.46■■□□□ 1.03
SNHG28-203ENST00000621242 FSTL1Q12841 308 aa21.46■■□□□ 1.03
SNHG28-203ENST00000621242 FKBP8Q14318 412 aa21.46■■□□□ 1.03
SNHG28-203ENST00000621242 RNF181Q9P0P0 153 aa21.46■■□□□ 1.03
SNHG28-203ENST00000621242 KDM2BQ8NHM5 1336 aa21.46■■□□□ 1.03
SNHG28-203ENST00000621242 POLR3GLQ9BT43 218 aa21.45■■□□□ 1.02
SNHG28-203ENST00000621242 RRAGCQ9HB90 399 aa21.45■■□□□ 1.02
SNHG28-203ENST00000621242 TJP1Q07157 1748 aa21.45■■□□□ 1.02
SNHG28-203ENST00000621242 TNRC6CQ9HCJ0 1690 aaKnown RBP21.44■■□□□ 1.02
SNHG28-203ENST00000621242 CHRNA5P30532 468 aa21.44■■□□□ 1.02
SNHG28-203ENST00000621242 MTHFSP49914 203 aa21.44■■□□□ 1.02
SNHG28-203ENST00000621242 AMOTQ4VCS5 1084 aa21.44■■□□□ 1.02
SNHG28-203ENST00000621242 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
SNHG28-203ENST00000621242 USP42Q9H9J4 1324 aaKnown RBP21.44■■□□□ 1.02
SNHG28-203ENST00000621242 COL13A1Q5TAT6 717 aaPredicted RBP21.43■■□□□ 1.02
SNHG28-203ENST00000621242 JMYQ8N9B5 988 aa21.43■■□□□ 1.02
SNHG28-203ENST00000621242 ADAMTS7Q9UKP4 1686 aa21.41■■□□□ 1.02
SNHG28-203ENST00000621242 C1orf141Q5JVX7 400 aa21.41■■□□□ 1.02
SNHG28-203ENST00000621242 AEBP1Q8IUX7 1158 aa21.41■■□□□ 1.02
SNHG28-203ENST00000621242 AFDNP55196 1824 aaKnown RBP21.41■■□□□ 1.02
SNHG28-203ENST00000621242 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
SNHG28-203ENST00000621242 POLRMTO00411 1230 aaKnown RBP21.4■■□□□ 1.02
SNHG28-203ENST00000621242 CCDC88AQ3V6T2 1871 aa21.4■■□□□ 1.02
SNHG28-203ENST00000621242 TM4SF1P30408 202 aa21.39■■□□□ 1.01
SNHG28-203ENST00000621242 INTS5Q6P9B9 1019 aaKnown RBP21.39■■□□□ 1.01
SNHG28-203ENST00000621242 USPL1Q5W0Q7 1092 aa21.37■■□□□ 1.01
SNHG28-203ENST00000621242 ZPR1O75312 459 aa21.36■■□□□ 1.01
SNHG28-203ENST00000621242 RASSF7Q02833 373 aa21.36■■□□□ 1.01
SNHG28-203ENST00000621242 SMC1BQ8NDV3 1235 aa21.36■■□□□ 1.01
SNHG28-203ENST00000621242 VIRMAQ69YN4 1812 aaKnown RBP21.36■■□□□ 1.01
SNHG28-203ENST00000621242 CAPN15O75808 1086 aa21.35■■□□□ 1.01
SNHG28-203ENST00000621242 SULT6B1Q6IMI4 303 aa21.35■■□□□ 1.01
SNHG28-203ENST00000621242 DNAJC10Q8IXB1 793 aa21.35■■□□□ 1.01
SNHG28-203ENST00000621242 DLEC1Q9Y238 1755 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms