RNA–Protein interactions for RNA: ENST00000621097.4

RFC2-213, Transcript of replication factor C subunit 2, humanhuman

TSL 5 BASIC

Gene RFC2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-213ENST00000621097 CHL1O00533 1208 aa24.85■■□□□ 1.57
RFC2-213ENST00000621097 GNAI1P63096 354 aa24.85■■□□□ 1.57
RFC2-213ENST00000621097 KRT27Q7Z3Y8 459 aa24.85■■□□□ 1.57
RFC2-213ENST00000621097 MIS18AQ9NYP9 233 aa24.85■■□□□ 1.57
RFC2-213ENST00000621097 TOGARAM1Q9Y4F4 1720 aa24.84■■□□□ 1.57
RFC2-213ENST00000621097 CABP4P57796 275 aa24.84■■□□□ 1.57
RFC2-213ENST00000621097 DUSP27Q5VZP5 1158 aa24.83■■□□□ 1.57
RFC2-213ENST00000621097 TSR2Q969E8 191 aaKnown RBP24.83■■□□□ 1.56
RFC2-213ENST00000621097 MBIPQ9NS73 344 aa24.83■■□□□ 1.56
RFC2-213ENST00000621097 MYH16Q9H6N6 1097 aa24.82■■□□□ 1.56
RFC2-213ENST00000621097 BCL9O00512 1426 aa24.81■■□□□ 1.56
RFC2-213ENST00000621097 PRIM1P49642 420 aaKnown RBP24.81■■□□□ 1.56
RFC2-213ENST00000621097 KAT6BQ8WYB5 2073 aa24.81■■□□□ 1.56
RFC2-213ENST00000621097 FANCIQ9NVI1 1328 aa24.81■■□□□ 1.56
RFC2-213ENST00000621097 SIPA1L3O60292 1781 aaPredicted RBP24.8■■□□□ 1.56
RFC2-213ENST00000621097 ACSBG1Q96GR2 724 aa24.8■■□□□ 1.56
RFC2-213ENST00000621097 BABAM1Q9NWV8 329 aa24.8■■□□□ 1.56
RFC2-213ENST00000621097 BTBD11A6QL63 1104 aa24.79■■□□□ 1.56
RFC2-213ENST00000621097 TSPYL4Q9UJ04 414 aa24.79■■□□□ 1.56
RFC2-213ENST00000621097 PIGBQ92521 554 aa24.79■■□□□ 1.56
RFC2-213ENST00000621097 TMOD3Q9NYL9 352 aa24.79■■□□□ 1.56
RFC2-213ENST00000621097 DOT1LQ8TEK3 1739 aa24.78■■□□□ 1.56
RFC2-213ENST00000621097 KCNQ3O43525 872 aa24.77■■□□□ 1.56
RFC2-213ENST00000621097 KCNQ2O43526 872 aa24.77■■□□□ 1.56
RFC2-213ENST00000621097 SYTL4Q96C24 671 aaPredicted RBP24.77■■□□□ 1.56
RFC2-213ENST00000621097 ITGB4P16144 1822 aa24.77■■□□□ 1.56
RFC2-213ENST00000621097 SLC39A6Q13433 755 aa24.75■■□□□ 1.55
RFC2-213ENST00000621097 FAM196AQ6ZSG2 479 aa24.75■■□□□ 1.55
RFC2-213ENST00000621097 ZNF790Q6PG37 636 aa24.74■■□□□ 1.55
RFC2-213ENST00000621097 PTF1AQ7RTS3 328 aa24.74■■□□□ 1.55
RFC2-213ENST00000621097 EXOSC9Q06265 439 aaKnown RBP24.73■■□□□ 1.55
RFC2-213ENST00000621097 KDM3BQ7LBC6 1761 aa24.73■■□□□ 1.55
RFC2-213ENST00000621097 EIF4A1P60842 406 aaKnown RBP24.72■■□□□ 1.55
RFC2-213ENST00000621097 KRT24Q2M2I5 525 aa24.72■■□□□ 1.55
RFC2-213ENST00000621097 ASAP1Q9ULH1 1129 aa24.72■■□□□ 1.55
RFC2-213ENST00000621097 ATG3Q9NT62 314 aa24.71■■□□□ 1.55
RFC2-213ENST00000621097 C8orf58Q8NAV2 365 aa24.7■■□□□ 1.54
RFC2-213ENST00000621097 SBF2Q86WG5 1849 aa24.69■■□□□ 1.54
RFC2-213ENST00000621097 TSPYL6Q8N831 410 aa24.69■■□□□ 1.54
RFC2-213ENST00000621097 TTC5Q8N0Z6 440 aa24.68■■□□□ 1.54
RFC2-213ENST00000621097 ZNF496Q96IT1 587 aaPredicted RBP24.68■■□□□ 1.54
RFC2-213ENST00000621097 NHSQ6T4R5 1651 aa24.68■■□□□ 1.54
RFC2-213ENST00000621097 HEG1Q9ULI3 1381 aa24.67■■□□□ 1.54
RFC2-213ENST00000621097 ELL2O00472 640 aaPredicted RBP24.67■■□□□ 1.54
RFC2-213ENST00000621097 PAPPAQ13219 1627 aa24.67■■□□□ 1.54
RFC2-213ENST00000621097 BCL11BQ9C0K0 894 aaPredicted RBP24.66■■□□□ 1.54
RFC2-213ENST00000621097 TRIM37O94972 964 aa24.65■■□□□ 1.54
RFC2-213ENST00000621097 SOCS7O14512 581 aa24.64■■□□□ 1.54
RFC2-213ENST00000621097 CENPBP07199 599 aaPredicted RBP24.64■■□□□ 1.54
RFC2-213ENST00000621097 TWISTNBQ3B726 338 aaPredicted RBP24.64■■□□□ 1.54
RFC2-213ENST00000621097 KCPQ6ZWJ8 1503 aa24.64■■□□□ 1.53
RFC2-213ENST00000621097 PTCD1O75127 700 aaKnown RBP24.64■■□□□ 1.53
RFC2-213ENST00000621097 FMNL2Q96PY5 1086 aa24.64■■□□□ 1.53
RFC2-213ENST00000621097 UBR2Q8IWV8 1755 aa24.63■■□□□ 1.53
RFC2-213ENST00000621097 VAMP4O75379 141 aa24.63■■□□□ 1.53
RFC2-213ENST00000621097 GIGYF1O75420 1035 aaPredicted RBP24.63■■□□□ 1.53
RFC2-213ENST00000621097 TNS1Q9HBL0 1735 aaKnown RBP24.62■■□□□ 1.53
RFC2-213ENST00000621097 BTAF1O14981 1849 aa24.62■■□□□ 1.53
RFC2-213ENST00000621097 PRAMEF22A3QJZ6 481 aa24.61■■□□□ 1.53
RFC2-213ENST00000621097 PALLDQ8WX93 1383 aa24.61■■□□□ 1.53
RFC2-213ENST00000621097 CT47B1P0C2W7 299 aaPredicted RBP24.61■■□□□ 1.53
RFC2-213ENST00000621097 UPF1Q92900 1129 aaKnown RBP eCLIP24.61■■□□□ 1.53
RFC2-213ENST00000621097 SMARCC1Q92922 1105 aaPredicted RBP24.61■■□□□ 1.53
RFC2-213ENST00000621097 SLC4A9Q96Q91 983 aa24.6■■□□□ 1.53
RFC2-213ENST00000621097 SNRPA1P09661 255 aaKnown RBP24.59■■□□□ 1.53
RFC2-213ENST00000621097 RBM42Q9BTD8 480 aaKnown RBP24.59■■□□□ 1.53
RFC2-213ENST00000621097 SOS1Q07889 1333 aaPredicted RBP24.58■■□□□ 1.53
RFC2-213ENST00000621097 HOXB7P09629 217 aa24.58■■□□□ 1.53
RFC2-213ENST00000621097 VSIG10Q8N0Z9 540 aa24.57■■□□□ 1.52
RFC2-213ENST00000621097 RCAN3Q9UKA8 241 aa24.57■■□□□ 1.52
RFC2-213ENST00000621097 LOC102724428A0A0B4J2F2 783 aa24.56■■□□□ 1.52
RFC2-213ENST00000621097 SIK1P57059 783 aa24.56■■□□□ 1.52
RFC2-213ENST00000621097 RARSP54136 660 aaKnown RBP24.55■■□□□ 1.52
RFC2-213ENST00000621097 USP16Q9Y5T5 823 aa24.55■■□□□ 1.52
RFC2-213ENST00000621097 ZNF428Q96B54 188 aa24.54■■□□□ 1.52
RFC2-213ENST00000621097 EIF2S2P20042 333 aaKnown RBP24.53■■□□□ 1.52
RFC2-213ENST00000621097 C5P01031 1676 aa24.53■■□□□ 1.52
RFC2-213ENST00000621097 TCERG1O14776 1098 aaKnown RBP24.53■■□□□ 1.52
RFC2-213ENST00000621097 HDGFL1Q5TGJ6 251 aa24.53■■□□□ 1.52
RFC2-213ENST00000621097 DNAJC10Q8IXB1 793 aa24.53■■□□□ 1.52
RFC2-213ENST00000621097 SSH1Q8WYL5 1049 aa24.53■■□□□ 1.52
RFC2-213ENST00000621097 NECTIN2Q92692 538 aa24.53■■□□□ 1.52
RFC2-213ENST00000621097 ATP6V1AP38606 617 aa24.51■■□□□ 1.51
RFC2-213ENST00000621097 BCL2L13Q9BXK5 485 aa24.51■■□□□ 1.51
RFC2-213ENST00000621097 BCAR3O75815 825 aa24.5■■□□□ 1.51
RFC2-213ENST00000621097 APBA3O96018 575 aa24.5■■□□□ 1.51
RFC2-213ENST00000621097 ITPK1Q13572 414 aa24.5■■□□□ 1.51
RFC2-213ENST00000621097 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
RFC2-213ENST00000621097 CCDC30Q5VVM6 783 aa24.5■■□□□ 1.51
RFC2-213ENST00000621097 TEX13AQ9BXU3 409 aaPredicted RBP24.5■■□□□ 1.51
RFC2-213ENST00000621097 PLSCR1O15162 318 aa24.49■■□□□ 1.51
RFC2-213ENST00000621097 KCNQ4P56696 695 aa24.49■■□□□ 1.51
RFC2-213ENST00000621097 SMC4Q9NTJ3 1288 aa24.48■■□□□ 1.51
RFC2-213ENST00000621097 LY75O60449 1722 aa24.48■■□□□ 1.51
RFC2-213ENST00000621097 TJP1Q07157 1748 aa24.47■■□□□ 1.51
RFC2-213ENST00000621097 CYP19A1P11511 503 aaPredicted RBP24.47■■□□□ 1.51
RFC2-213ENST00000621097 CHMP4AQ9BY43 222 aa24.47■■□□□ 1.51
RFC2-213ENST00000621097 CHPF2Q9P2E5 772 aa24.47■■□□□ 1.51
RFC2-213ENST00000621097 CCNL1Q9UK58 526 aaPredicted RBP24.47■■□□□ 1.51
RFC2-213ENST00000621097 STARD3NLO95772 234 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms