RNA–Protein interactions for RNA: ENST00000621036.4

CYFIP1-212, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 3

Gene CYFIP1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-212ENST00000621036 SSFA2P28290 1259 aa13.38□□□□□ -0.27
CYFIP1-212ENST00000621036 LINC00116Q8NCU8 138 aa13.38□□□□□ -0.27
CYFIP1-212ENST00000621036 PIGBQ92521 554 aa13.38□□□□□ -0.27
CYFIP1-212ENST00000621036 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
CYFIP1-212ENST00000621036 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
CYFIP1-212ENST00000621036 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
CYFIP1-212ENST00000621036 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
CYFIP1-212ENST00000621036 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
CYFIP1-212ENST00000621036 NSD3Q9BZ95 1437 aa13.37□□□□□ -0.27
CYFIP1-212ENST00000621036 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
CYFIP1-212ENST00000621036 SIK1P57059 783 aa13.36□□□□□ -0.27
CYFIP1-212ENST00000621036 BCS1LQ9Y276 419 aa13.36□□□□□ -0.27
CYFIP1-212ENST00000621036 TAF1LQ8IZX4 1826 aa13.36□□□□□ -0.27
CYFIP1-212ENST00000621036 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
CYFIP1-212ENST00000621036 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
CYFIP1-212ENST00000621036 FYB1O15117 783 aa13.35□□□□□ -0.27
CYFIP1-212ENST00000621036 GNPATO15228 680 aa13.35□□□□□ -0.27
CYFIP1-212ENST00000621036 MMP10P09238 476 aa13.35□□□□□ -0.27
CYFIP1-212ENST00000621036 HTRA3P83110 453 aa13.35□□□□□ -0.27
CYFIP1-212ENST00000621036 COL13A1Q5TAT6 717 aaPredicted RBP13.35□□□□□ -0.27
CYFIP1-212ENST00000621036 INSRP06213 1382 aa13.34□□□□□ -0.27
CYFIP1-212ENST00000621036 A0A0G2JLW4 131 aa13.34□□□□□ -0.27
CYFIP1-212ENST00000621036 ITPK1Q13572 414 aa13.34□□□□□ -0.27
CYFIP1-212ENST00000621036 ARHGAP27Q6ZUM4 889 aa13.34□□□□□ -0.27
CYFIP1-212ENST00000621036 TESK2Q96S53 571 aa13.34□□□□□ -0.27
CYFIP1-212ENST00000621036 TGFB2P61812 414 aa13.33□□□□□ -0.28
CYFIP1-212ENST00000621036 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
CYFIP1-212ENST00000621036 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
CYFIP1-212ENST00000621036 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.28
CYFIP1-212ENST00000621036 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
CYFIP1-212ENST00000621036 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
CYFIP1-212ENST00000621036 RBM46Q8TBY0 533 aaKnown RBP13.32□□□□□ -0.28
CYFIP1-212ENST00000621036 KLRG1Q96E93 195 aa13.32□□□□□ -0.28
CYFIP1-212ENST00000621036 FLT4P35916 1363 aa13.32□□□□□ -0.28
CYFIP1-212ENST00000621036 DPEP1P16444 411 aa13.31□□□□□ -0.28
CYFIP1-212ENST00000621036 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
CYFIP1-212ENST00000621036 FCHSD2O94868 740 aa13.3□□□□□ -0.28
CYFIP1-212ENST00000621036 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
CYFIP1-212ENST00000621036 C16orf71Q8IYS4 520 aaPredicted RBP13.3□□□□□ -0.28
CYFIP1-212ENST00000621036 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
CYFIP1-212ENST00000621036 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
CYFIP1-212ENST00000621036 C10orf71Q711Q0 1435 aa13.3□□□□□ -0.28
CYFIP1-212ENST00000621036 TMF1P82094 1093 aa13.29□□□□□ -0.28
CYFIP1-212ENST00000621036 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
CYFIP1-212ENST00000621036 NLGN1Q8N2Q7 840 aa13.29□□□□□ -0.28
CYFIP1-212ENST00000621036 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
CYFIP1-212ENST00000621036 EMILIN1Q9Y6C2 1016 aa13.29□□□□□ -0.28
CYFIP1-212ENST00000621036 MAP2P11137 1827 aaKnown RBP13.28□□□□□ -0.28
CYFIP1-212ENST00000621036 ITGB4P16144 1822 aa13.28□□□□□ -0.28
CYFIP1-212ENST00000621036 CCDC87Q9NVE4 849 aa13.28□□□□□ -0.28
CYFIP1-212ENST00000621036 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
CYFIP1-212ENST00000621036 KIF24Q5T7B8 1368 aa13.28□□□□□ -0.28
CYFIP1-212ENST00000621036 WDR90Q96KV7 1748 aa13.27□□□□□ -0.28
CYFIP1-212ENST00000621036 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.28
CYFIP1-212ENST00000621036 KCNA3P22001 575 aa13.27□□□□□ -0.29
CYFIP1-212ENST00000621036 FSTL1Q12841 308 aa13.27□□□□□ -0.29
CYFIP1-212ENST00000621036 ARHGEF1Q92888 912 aaKnown RBP13.27□□□□□ -0.29
CYFIP1-212ENST00000621036 PPM1GO15355 546 aaPredicted RBP13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 GYS1P13807 737 aa13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 NCAPD2Q15021 1401 aa13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 PKD1L3Q7Z443 1732 aa13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 TNS4Q8IZW8 715 aa13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
CYFIP1-212ENST00000621036 KCPQ6ZWJ8 1503 aa13.25□□□□□ -0.29
CYFIP1-212ENST00000621036 PLEKHG2Q9H7P9 1386 aa13.25□□□□□ -0.29
CYFIP1-212ENST00000621036 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
CYFIP1-212ENST00000621036 PHKG2P15735 406 aa13.25□□□□□ -0.29
CYFIP1-212ENST00000621036 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
CYFIP1-212ENST00000621036 RRAGCQ9HB90 399 aa13.25□□□□□ -0.29
CYFIP1-212ENST00000621036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■■□ 24
CYFIP1-212ENST00000621036 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
CYFIP1-212ENST00000621036 KDRP35968 1356 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 RFC4P35249 363 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 PRELPP51888 382 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 EYA1Q99502 592 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 RNF181Q9P0P0 153 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
CYFIP1-212ENST00000621036 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
CYFIP1-212ENST00000621036 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
CYFIP1-212ENST00000621036 RC3H1Q5TC82 1133 aaKnown RBP13.23□□□□□ -0.29
CYFIP1-212ENST00000621036 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
CYFIP1-212ENST00000621036 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
CYFIP1-212ENST00000621036 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
CYFIP1-212ENST00000621036 CARD14Q9BXL6 1004 aa13.22□□□□□ -0.29
CYFIP1-212ENST00000621036 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
CYFIP1-212ENST00000621036 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
CYFIP1-212ENST00000621036 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
CYFIP1-212ENST00000621036 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
CYFIP1-212ENST00000621036 SMC1BQ8NDV3 1235 aa13.21□□□□□ -0.29
CYFIP1-212ENST00000621036 CHRNA5P30532 468 aa13.2□□□□□ -0.3
CYFIP1-212ENST00000621036 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
CYFIP1-212ENST00000621036 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
CYFIP1-212ENST00000621036 HSPA1AP0DMV8 641 aaKnown RBP13.19□□□□□ -0.3
CYFIP1-212ENST00000621036 HSPA1BP0DMV9 641 aaKnown RBP13.19□□□□□ -0.3
CYFIP1-212ENST00000621036 DDR1Q08345 913 aa13.19□□□□□ -0.3
CYFIP1-212ENST00000621036 POTEHQ6S545 545 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms