RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 RBM42Q9BTD8 480 aaKnown RBP39.06■■■■□ 3.84
SEMA3B-215ENST00000621029 SYT17Q9BSW7 474 aa39.05■■■■□ 3.84
SEMA3B-215ENST00000621029 CFAP53Q96M91 514 aa39.04■■■■□ 3.84
SEMA3B-215ENST00000621029 PHF14O94880 888 aa39.03■■■■□ 3.84
SEMA3B-215ENST00000621029 AKAP4Q5JQC9 854 aa39.03■■■■□ 3.84
SEMA3B-215ENST00000621029 LINC00116Q8NCU8 138 aa39.03■■■■□ 3.84
SEMA3B-215ENST00000621029 ITPK1Q13572 414 aa39.01■■■■□ 3.84
SEMA3B-215ENST00000621029 MSL1Q68DK7 614 aa39.01■■■■□ 3.84
SEMA3B-215ENST00000621029 NFATC2IPQ8NCF5 419 aa39.01■■■■□ 3.84
SEMA3B-215ENST00000621029 C4BP0C0L5 1744 aa39■■■■□ 3.83
SEMA3B-215ENST00000621029 TAF1LQ8IZX4 1826 aa39■■■■□ 3.83
SEMA3B-215ENST00000621029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.96■■■■□ 3.83
SEMA3B-215ENST00000621029 GNPATO15228 680 aa38.96■■■■□ 3.83
SEMA3B-215ENST00000621029 MTHFSDQ2M296 383 aaKnown RBP38.96■■■■□ 3.83
SEMA3B-215ENST00000621029 SMIM5Q71RC9 77 aa38.96■■■■□ 3.83
SEMA3B-215ENST00000621029 COL3A1P02461 1466 aaPredicted RBP38.96■■■■□ 3.83
SEMA3B-215ENST00000621029 PTCD1O75127 700 aaKnown RBP38.94■■■■□ 3.82
SEMA3B-215ENST00000621029 PPP2R1AP30153 589 aa38.94■■■■□ 3.82
SEMA3B-215ENST00000621029 AMIGO3Q86WK7 504 aa38.93■■■■□ 3.82
SEMA3B-215ENST00000621029 SSFA2P28290 1259 aa38.92■■■■□ 3.82
SEMA3B-215ENST00000621029 LGR6Q9HBX8 967 aa38.92■■■■□ 3.82
SEMA3B-215ENST00000621029 SLC4A9Q96Q91 983 aa38.91■■■■□ 3.82
SEMA3B-215ENST00000621029 NUDCQ9Y266 331 aa38.91■■■■□ 3.82
SEMA3B-215ENST00000621029 RNMTO43148 476 aaKnown RBP38.89■■■■□ 3.82
SEMA3B-215ENST00000621029 SLC52A2Q9HAB3 445 aa38.89■■■■□ 3.82
SEMA3B-215ENST00000621029 MAP3K5Q99683 1374 aa38.88■■■■□ 3.81
SEMA3B-215ENST00000621029 RTCBQ9Y3I0 505 aaKnown RBP38.85■■■■□ 3.81
SEMA3B-215ENST00000621029 GAS2L2Q8NHY3 880 aa38.84■■■■□ 3.81
SEMA3B-215ENST00000621029 U2AF1L5P0DN76 240 aaPredicted RBP38.83■■■■□ 3.81
SEMA3B-215ENST00000621029 U2AF1Q01081 240 aaKnown RBP eCLIP38.83■■■■□ 3.81
SEMA3B-215ENST00000621029 COL24A1Q17RW2 1714 aa38.82■■■■□ 3.8
SEMA3B-215ENST00000621029 SCN11AQ9UI33 1791 aa38.82■■■■□ 3.8
SEMA3B-215ENST00000621029 UBR3Q6ZT12 1888 aa38.81■■■■□ 3.8
SEMA3B-215ENST00000621029 PRKAR2BP31323 418 aa38.81■■■■□ 3.8
SEMA3B-215ENST00000621029 TRAPPC3LQ5T215 181 aa38.81■■■■□ 3.8
SEMA3B-215ENST00000621029 YY1P25490 414 aa38.8■■■■□ 3.8
SEMA3B-215ENST00000621029 RC3H1Q5TC82 1133 aaKnown RBP38.8■■■■□ 3.8
SEMA3B-215ENST00000621029 PELP1Q8IZL8 1130 aaKnown RBP38.79■■■■□ 3.8
SEMA3B-215ENST00000621029 GNAT3A8MTJ3 354 aa38.78■■■■□ 3.8
SEMA3B-215ENST00000621029 SLC39A6Q13433 755 aa38.78■■■■□ 3.8
SEMA3B-215ENST00000621029 GPR162Q16538 588 aa38.78■■■■□ 3.8
SEMA3B-215ENST00000621029 CNTNAP4Q9C0A0 1308 aa38.78■■■■□ 3.8
SEMA3B-215ENST00000621029 NLGN2Q8NFZ4 835 aa38.77■■■■□ 3.8
SEMA3B-215ENST00000621029 RSPH6AQ9H0K4 717 aa38.76■■■■□ 3.8
SEMA3B-215ENST00000621029 ZNF831Q5JPB2 1677 aa38.74■■■■□ 3.79
SEMA3B-215ENST00000621029 RPS6KA4O75676 772 aa38.74■■■■□ 3.79
SEMA3B-215ENST00000621029 TEFQ10587 303 aa38.74■■■■□ 3.79
SEMA3B-215ENST00000621029 PHACTR3Q96KR7 559 aa38.74■■■■□ 3.79
SEMA3B-215ENST00000621029 CRKLP46109 303 aaKnown RBP38.73■■■■□ 3.79
SEMA3B-215ENST00000621029 MRC1P22897 1456 aa38.73■■■■□ 3.79
SEMA3B-215ENST00000621029 ADRA2BP18089 450 aa38.72■■■■□ 3.79
SEMA3B-215ENST00000621029 RFC4P35249 363 aa38.72■■■■□ 3.79
SEMA3B-215ENST00000621029 ARHGEF1Q92888 912 aaKnown RBP38.72■■■■□ 3.79
SEMA3B-215ENST00000621029 DNAJC10Q8IXB1 793 aa38.7■■■■□ 3.79
SEMA3B-215ENST00000621029 TTC5Q8N0Z6 440 aa38.69■■■■□ 3.78
SEMA3B-215ENST00000621029 IL17REQ8NFR9 667 aa38.69■■■■□ 3.78
SEMA3B-215ENST00000621029 FCHSD2O94868 740 aa38.68■■■■□ 3.78
SEMA3B-215ENST00000621029 DDX10Q13206 875 aaKnown RBP38.68■■■■□ 3.78
SEMA3B-215ENST00000621029 CD2APQ9Y5K6 639 aa38.68■■■■□ 3.78
SEMA3B-215ENST00000621029 COL5A3P25940 1745 aaPredicted RBP38.67■■■■□ 3.78
SEMA3B-215ENST00000621029 MMP10P09238 476 aa38.65■■■■□ 3.78
SEMA3B-215ENST00000621029 NLGN1Q8N2Q7 840 aa38.65■■■■□ 3.78
SEMA3B-215ENST00000621029 ADAMTS7Q9UKP4 1686 aa38.63■■■■□ 3.77
SEMA3B-215ENST00000621029 CCDC87Q9NVE4 849 aa38.63■■■■□ 3.77
SEMA3B-215ENST00000621029 INTS5Q6P9B9 1019 aaKnown RBP38.62■■■■□ 3.77
SEMA3B-215ENST00000621029 RTF1Q92541 710 aaKnown RBP38.62■■■■□ 3.77
SEMA3B-215ENST00000621029 NEFMP07197 916 aa38.61■■■■□ 3.77
SEMA3B-215ENST00000621029 VIRMAQ69YN4 1812 aaKnown RBP38.61■■■■□ 3.77
SEMA3B-215ENST00000621029 TJP1Q07157 1748 aa38.6■■■■□ 3.77
SEMA3B-215ENST00000621029 CYP19A1P11511 503 aaPredicted RBP38.59■■■■□ 3.77
SEMA3B-215ENST00000621029 GYS1P13807 737 aa38.59■■■■□ 3.77
SEMA3B-215ENST00000621029 KCPQ6ZWJ8 1503 aa38.58■■■■□ 3.77
SEMA3B-215ENST00000621029 VSIG10Q8N0Z9 540 aa38.58■■■■□ 3.77
SEMA3B-215ENST00000621029 MYH14Q7Z406 1995 aaKnown RBP38.57■■■■□ 3.77
SEMA3B-215ENST00000621029 ZNF790Q6PG37 636 aa38.57■■■■□ 3.76
SEMA3B-215ENST00000621029 RALBP1Q15311 655 aa38.56■■■■□ 3.76
SEMA3B-215ENST00000621029 SRP68Q9UHB9 627 aaKnown RBP38.56■■■■□ 3.76
SEMA3B-215ENST00000621029 BTBD11A6QL63 1104 aa38.54■■■■□ 3.76
SEMA3B-215ENST00000621029 MCM10Q7L590 875 aa38.54■■■■□ 3.76
SEMA3B-215ENST00000621029 ZNF496Q96IT1 587 aaPredicted RBP38.54■■■■□ 3.76
SEMA3B-215ENST00000621029 PARP3Q9Y6F1 533 aa38.53■■■■□ 3.76
SEMA3B-215ENST00000621029 CEMIPQ8WUJ3 1361 aa38.53■■■■□ 3.76
SEMA3B-215ENST00000621029 CICQ96RK0 1608 aaPredicted RBP38.52■■■■□ 3.76
SEMA3B-215ENST00000621029 STARD3NLO95772 234 aa38.52■■■■□ 3.76
SEMA3B-215ENST00000621029 GRIN3BO60391 1043 aa38.51■■■■□ 3.76
SEMA3B-215ENST00000621029 ZPR1O75312 459 aa38.51■■■■□ 3.76
SEMA3B-215ENST00000621029 YBX3P16989 372 aaKnown RBP eCLIP38.51■■■■□ 3.76
SEMA3B-215ENST00000621029 USP42Q9H9J4 1324 aaKnown RBP38.51■■■■□ 3.76
SEMA3B-215ENST00000621029 SOS1Q07889 1333 aaPredicted RBP38.5■■■■□ 3.75
SEMA3B-215ENST00000621029 CANXP27824 592 aaKnown RBP38.5■■■■□ 3.75
SEMA3B-215ENST00000621029 WWC3Q9ULE0 1092 aa38.5■■■■□ 3.75
SEMA3B-215ENST00000621029 ZBTB1Q9Y2K1 713 aa38.5■■■■□ 3.75
SEMA3B-215ENST00000621029 DCTN1Q14203 1278 aa38.49■■■■□ 3.75
SEMA3B-215ENST00000621029 FMNL2Q96PY5 1086 aa38.49■■■■□ 3.75
SEMA3B-215ENST00000621029 HEG1Q9ULI3 1381 aa38.47■■■■□ 3.75
SEMA3B-215ENST00000621029 FKBP8Q14318 412 aa38.47■■■■□ 3.75
SEMA3B-215ENST00000621029 TEX13AQ9BXU3 409 aaPredicted RBP38.47■■■■□ 3.75
SEMA3B-215ENST00000621029 HTATSF1O43719 755 aaKnown RBP38.46■■■■□ 3.75
SEMA3B-215ENST00000621029 PNNQ9H307 717 aaKnown RBP38.46■■■■□ 3.75
SEMA3B-215ENST00000621029 C4AP0C0L4 1744 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms