RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 LINC00116Q8NCU8 138 aa30.28■■■□□ 2.44
SRRT-218ENST00000620394 KIAA1551Q9HCM1 1747 aa30.27■■■□□ 2.44
SRRT-218ENST00000620394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.27■■■□□ 2.44
SRRT-218ENST00000620394 TMOD3Q9NYL9 352 aa30.27■■■□□ 2.44
SRRT-218ENST00000620394 EIF4A2Q14240 407 aaKnown RBP30.25■■■□□ 2.43
SRRT-218ENST00000620394 WWC3Q9ULE0 1092 aa30.25■■■□□ 2.43
SRRT-218ENST00000620394 ZNF831Q5JPB2 1677 aa30.25■■■□□ 2.43
SRRT-218ENST00000620394 GNPATO15228 680 aa30.24■■■□□ 2.43
SRRT-218ENST00000620394 TNNT2P45379 298 aaPredicted RBP30.24■■■□□ 2.43
SRRT-218ENST00000620394 SMIM5Q71RC9 77 aa30.24■■■□□ 2.43
SRRT-218ENST00000620394 PXDNLA1KZ92 1463 aa30.22■■■□□ 2.43
SRRT-218ENST00000620394 COL5A3P25940 1745 aaPredicted RBP30.21■■■□□ 2.43
SRRT-218ENST00000620394 N4BP2Q86UW6 1770 aaPredicted RBP30.2■■■□□ 2.43
SRRT-218ENST00000620394 KDRP35968 1356 aa30.2■■■□□ 2.43
SRRT-218ENST00000620394 ATP6V1AP38606 617 aa30.2■■■□□ 2.43
SRRT-218ENST00000620394 ITPK1Q13572 414 aa30.2■■■□□ 2.43
SRRT-218ENST00000620394 IFNL2Q8IZJ0 200 aa30.19■■■□□ 2.42
SRRT-218ENST00000620394 ASAP1Q9ULH1 1129 aa30.19■■■□□ 2.42
SRRT-218ENST00000620394 KIF7Q2M1P5 1343 aa30.19■■■□□ 2.42
SRRT-218ENST00000620394 KIF3CO14782 793 aa30.18■■■□□ 2.42
SRRT-218ENST00000620394 PHKG2P15735 406 aa30.18■■■□□ 2.42
SRRT-218ENST00000620394 C10orf71Q711Q0 1435 aa30.17■■■□□ 2.42
SRRT-218ENST00000620394 MMP10P09238 476 aa30.17■■■□□ 2.42
SRRT-218ENST00000620394 BRCA1P38398 1863 aaKnown RBP30.16■■■□□ 2.42
SRRT-218ENST00000620394 C4AP0C0L4 1744 aa30.16■■■□□ 2.42
SRRT-218ENST00000620394 KNSTRNQ9Y448 316 aa30.15■■■□□ 2.42
SRRT-218ENST00000620394 MORC1Q86VD1 984 aa30.14■■■□□ 2.42
SRRT-218ENST00000620394 AMER1Q5JTC6 1135 aaPredicted RBP30.13■■■□□ 2.41
SRRT-218ENST00000620394 ATG3Q9NT62 314 aa30.13■■■□□ 2.41
SRRT-218ENST00000620394 TGFB2P61812 414 aa30.12■■■□□ 2.41
SRRT-218ENST00000620394 RTCBQ9Y3I0 505 aaKnown RBP30.12■■■□□ 2.41
SRRT-218ENST00000620394 ADRA2BP18089 450 aa30.1■■■□□ 2.41
SRRT-218ENST00000620394 NLGN1Q8N2Q7 840 aa30.1■■■□□ 2.41
SRRT-218ENST00000620394 ARFGEF1Q9Y6D6 1849 aa30.1■■■□□ 2.41
SRRT-218ENST00000620394 TRAPPC3LQ5T215 181 aa30.09■■■□□ 2.41
SRRT-218ENST00000620394 BCS1LQ9Y276 419 aa30.08■■■□□ 2.41
SRRT-218ENST00000620394 CNTNAP4Q9C0A0 1308 aa30.07■■■□□ 2.4
SRRT-218ENST00000620394 APLP1P51693 650 aa30.07■■■□□ 2.4
SRRT-218ENST00000620394 CCDC87Q9NVE4 849 aa30.06■■■□□ 2.4
SRRT-218ENST00000620394 ERVV-2B6SEH9 535 aa30.05■■■□□ 2.4
SRRT-218ENST00000620394 TOMM70O94826 608 aa30.05■■■□□ 2.4
SRRT-218ENST00000620394 HSP90AB1P08238 724 aaKnown RBP30.05■■■□□ 2.4
SRRT-218ENST00000620394 KDM6AO15550 1401 aaPredicted RBP30.05■■■□□ 2.4
SRRT-218ENST00000620394 RC3H1Q5TC82 1133 aaKnown RBP30.04■■■□□ 2.4
SRRT-218ENST00000620394 MYH14Q7Z406 1995 aaKnown RBP30.03■■■□□ 2.4
SRRT-218ENST00000620394 WDR90Q96KV7 1748 aa30.03■■■□□ 2.4
SRRT-218ENST00000620394 PER1O15534 1290 aaPredicted RBP30.03■■■□□ 2.4
SRRT-218ENST00000620394 DCAF5Q96JK2 942 aa30.03■■■□□ 2.4
SRRT-218ENST00000620394 SLC4A9Q96Q91 983 aa30.03■■■□□ 2.4
SRRT-218ENST00000620394 RBM42Q9BTD8 480 aaKnown RBP30.03■■■□□ 2.4
SRRT-218ENST00000620394 A0A0G2JLW4 131 aa30.02■■■□□ 2.4
SRRT-218ENST00000620394 AMOTQ4VCS5 1084 aa30.02■■■□□ 2.4
SRRT-218ENST00000620394 PLEKHO1Q53GL0 409 aaPredicted RBP30.02■■■□□ 2.4
SRRT-218ENST00000620394 AEBP1Q8IUX7 1158 aa30.02■■■□□ 2.4
SRRT-218ENST00000620394 GYS1P13807 737 aa30.01■■■□□ 2.39
SRRT-218ENST00000620394 IL13P35225 146 aa30.01■■■□□ 2.39
SRRT-218ENST00000620394 ARHGEF1Q92888 912 aaKnown RBP30.01■■■□□ 2.39
SRRT-218ENST00000620394 RFC4P35249 363 aa30■■■□□ 2.39
SRRT-218ENST00000620394 PARP3Q9Y6F1 533 aa30■■■□□ 2.39
SRRT-218ENST00000620394 RPS6KA4O75676 772 aa29.99■■■□□ 2.39
SRRT-218ENST00000620394 DPEP1P16444 411 aa29.99■■■□□ 2.39
SRRT-218ENST00000620394 ARHGAP27Q6ZUM4 889 aa29.99■■■□□ 2.39
SRRT-218ENST00000620394 SCN11AQ9UI33 1791 aa29.99■■■□□ 2.39
SRRT-218ENST00000620394 NPC1L1Q9UHC9 1359 aa29.99■■■□□ 2.39
SRRT-218ENST00000620394 FCHSD2O94868 740 aa29.98■■■□□ 2.39
SRRT-218ENST00000620394 ZNF530Q6P9A1 599 aaPredicted RBP29.98■■■□□ 2.39
SRRT-218ENST00000620394 TJP1Q07157 1748 aa29.98■■■□□ 2.39
SRRT-218ENST00000620394 SULT6B1Q6IMI4 303 aa29.95■■■□□ 2.39
SRRT-218ENST00000620394 NMRK2Q9NPI5 230 aa29.95■■■□□ 2.39
SRRT-218ENST00000620394 CABP4P57796 275 aa29.94■■■□□ 2.38
SRRT-218ENST00000620394 TNRC6CQ9HCJ0 1690 aaKnown RBP29.94■■■□□ 2.38
SRRT-218ENST00000620394 VIRMAQ69YN4 1812 aaKnown RBP29.94■■■□□ 2.38
SRRT-218ENST00000620394 MTHFSP49914 203 aa29.93■■■□□ 2.38
SRRT-218ENST00000620394 RBM46Q8TBY0 533 aaKnown RBP29.92■■■□□ 2.38
SRRT-218ENST00000620394 COL3A1P02461 1466 aaPredicted RBP29.92■■■□□ 2.38
SRRT-218ENST00000620394 ADAMTS7Q9UKP4 1686 aa29.91■■■□□ 2.38
SRRT-218ENST00000620394 C1orf141Q5JVX7 400 aa29.9■■■□□ 2.38
SRRT-218ENST00000620394 C9orf131Q5VYM1 1079 aa29.9■■■□□ 2.38
SRRT-218ENST00000620394 DNAJC5GQ8N7S2 189 aa29.9■■■□□ 2.38
SRRT-218ENST00000620394 PIM2Q9P1W9 311 aa29.9■■■□□ 2.38
SRRT-218ENST00000620394 USP42Q9H9J4 1324 aaKnown RBP29.9■■■□□ 2.38
SRRT-218ENST00000620394 MRC1P22897 1456 aa29.89■■■□□ 2.38
SRRT-218ENST00000620394 KCNA3P22001 575 aa29.89■■■□□ 2.38
SRRT-218ENST00000620394 CRKLP46109 303 aaKnown RBP29.88■■■□□ 2.37
SRRT-218ENST00000620394 CC2D1BQ5T0F9 858 aaKnown RBP29.88■■■□□ 2.37
SRRT-218ENST00000620394 C16orf71Q8IYS4 520 aaPredicted RBP29.88■■■□□ 2.37
SRRT-218ENST00000620394 KCPQ6ZWJ8 1503 aa29.87■■■□□ 2.37
SRRT-218ENST00000620394 SBF1O95248 1867 aa29.87■■■□□ 2.37
SRRT-218ENST00000620394 PTCD1O75127 700 aaKnown RBP29.86■■■□□ 2.37
SRRT-218ENST00000620394 DALRD3Q5D0E6 543 aaKnown RBP29.86■■■□□ 2.37
SRRT-218ENST00000620394 KDM2BQ8NHM5 1336 aa29.86■■■□□ 2.37
SRRT-218ENST00000620394 FSTL1Q12841 308 aa29.84■■■□□ 2.37
SRRT-218ENST00000620394 SRP68Q9UHB9 627 aaKnown RBP29.84■■■□□ 2.37
SRRT-218ENST00000620394 DDR1Q08345 913 aa29.83■■■□□ 2.37
SRRT-218ENST00000620394 FKBP8Q14318 412 aa29.83■■■□□ 2.37
SRRT-218ENST00000620394 AKAP4Q5JQC9 854 aa29.82■■■□□ 2.36
SRRT-218ENST00000620394 RNF181Q9P0P0 153 aa29.82■■■□□ 2.36
SRRT-218ENST00000620394 DLEC1Q9Y238 1755 aa29.82■■■□□ 2.36
SRRT-218ENST00000620394 DIAPH1O60610 1272 aaKnown RBP29.81■■■□□ 2.36
SRRT-218ENST00000620394 NFATC2IPQ8NCF5 419 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms