RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 PHKG2P15735 406 aa19.4■□□□□ 0.7
PSMC3-213ENST00000619920 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
PSMC3-213ENST00000619920 CARD10Q9BWT7 1032 aa19.39■□□□□ 0.69
PSMC3-213ENST00000619920 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
PSMC3-213ENST00000619920 TOM1L2Q6ZVM7 507 aa19.38■□□□□ 0.69
PSMC3-213ENST00000619920 PKD1L3Q7Z443 1732 aa19.37■□□□□ 0.69
PSMC3-213ENST00000619920 CACNA1FO60840 1977 aa19.36■□□□□ 0.69
PSMC3-213ENST00000619920 VIRMAQ69YN4 1812 aaKnown RBP19.36■□□□□ 0.69
PSMC3-213ENST00000619920 DCAF5Q96JK2 942 aa19.36■□□□□ 0.69
PSMC3-213ENST00000619920 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
PSMC3-213ENST00000619920 EVA1CP58658 441 aa19.35■□□□□ 0.69
PSMC3-213ENST00000619920 HDGFL1Q5TGJ6 251 aa19.35■□□□□ 0.69
PSMC3-213ENST00000619920 COL22A1Q8NFW1 1626 aaPredicted RBP19.35■□□□□ 0.69
PSMC3-213ENST00000619920 KDM6AO15550 1401 aaPredicted RBP19.35■□□□□ 0.69
PSMC3-213ENST00000619920 HEG1Q9ULI3 1381 aa19.34■□□□□ 0.69
PSMC3-213ENST00000619920 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
PSMC3-213ENST00000619920 G2E3Q7L622 706 aa19.34■□□□□ 0.69
PSMC3-213ENST00000619920 SLC52A2Q9HAB3 445 aa19.34■□□□□ 0.69
PSMC3-213ENST00000619920 PARP4Q9UKK3 1724 aaKnown RBP19.33■□□□□ 0.69
PSMC3-213ENST00000619920 CYP27B1O15528 508 aa19.33■□□□□ 0.69
PSMC3-213ENST00000619920 KCNQ3O43525 872 aa19.33■□□□□ 0.69
PSMC3-213ENST00000619920 CCT4P50991 539 aaKnown RBP19.33■□□□□ 0.69
PSMC3-213ENST00000619920 FLIIQ13045 1269 aa19.33■□□□□ 0.69
PSMC3-213ENST00000619920 SKAP1Q86WV1 359 aa19.33■□□□□ 0.69
PSMC3-213ENST00000619920 IL2RBP14784 551 aa19.32■□□□□ 0.68
PSMC3-213ENST00000619920 PDE4AP27815 886 aa19.32■□□□□ 0.68
PSMC3-213ENST00000619920 SMC5Q8IY18 1101 aa19.32■□□□□ 0.68
PSMC3-213ENST00000619920 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
PSMC3-213ENST00000619920 MRC1P22897 1456 aa19.31■□□□□ 0.68
PSMC3-213ENST00000619920 TOM1O60784 492 aa19.31■□□□□ 0.68
PSMC3-213ENST00000619920 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
PSMC3-213ENST00000619920 STRN4Q9NRL3 753 aa19.31■□□□□ 0.68
PSMC3-213ENST00000619920 PCDH11XQ9BZA7 1347 aa19.3■□□□□ 0.68
PSMC3-213ENST00000619920 PCDH11YQ9BZA8 1340 aa19.3■□□□□ 0.68
PSMC3-213ENST00000619920 COL14A1Q05707 1796 aaKnown RBP19.3■□□□□ 0.68
PSMC3-213ENST00000619920 GIGYF1O75420 1035 aaPredicted RBP19.3■□□□□ 0.68
PSMC3-213ENST00000619920 BACH2Q9BYV9 841 aa19.3■□□□□ 0.68
PSMC3-213ENST00000619920 PDZRN3Q9UPQ7 1066 aa19.3■□□□□ 0.68
PSMC3-213ENST00000619920 RGS3P49796 1198 aa19.29■□□□□ 0.68
PSMC3-213ENST00000619920 NECTIN2Q92692 538 aa19.29■□□□□ 0.68
PSMC3-213ENST00000619920 FKBP5Q13451 457 aaPredicted RBP19.28■□□□□ 0.68
PSMC3-213ENST00000619920 ZNF790Q6PG37 636 aa19.28■□□□□ 0.68
PSMC3-213ENST00000619920 NFATC2IPQ8NCF5 419 aa19.28■□□□□ 0.68
PSMC3-213ENST00000619920 EIF2S2P20042 333 aaKnown RBP19.27■□□□□ 0.68
PSMC3-213ENST00000619920 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.68
PSMC3-213ENST00000619920 BTG4Q9NY30 223 aa19.27■□□□□ 0.68
PSMC3-213ENST00000619920 PXDNLA1KZ92 1463 aa19.27■□□□□ 0.68
PSMC3-213ENST00000619920 GCC1Q96CN9 775 aa19.27■□□□□ 0.67
PSMC3-213ENST00000619920 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.67
PSMC3-213ENST00000619920 F6X3S4 739 aa19.26■□□□□ 0.67
PSMC3-213ENST00000619920 COL16A1Q07092 1604 aaPredicted RBP19.26■□□□□ 0.67
PSMC3-213ENST00000619920 PHLPP1O60346 1717 aa19.25■□□□□ 0.67
PSMC3-213ENST00000619920 ERVV-2B6SEH9 535 aa19.25■□□□□ 0.67
PSMC3-213ENST00000619920 CABP4P57796 275 aa19.25■□□□□ 0.67
PSMC3-213ENST00000619920 SLC4A10Q6U841 1118 aa19.25■□□□□ 0.67
PSMC3-213ENST00000619920 RPAP2Q8IXW5 612 aaPredicted RBP19.25■□□□□ 0.67
PSMC3-213ENST00000619920 C1orf115Q9H7X2 142 aa19.25■□□□□ 0.67
PSMC3-213ENST00000619920 CHPF2Q9P2E5 772 aa19.25■□□□□ 0.67
PSMC3-213ENST00000619920 FAM161AQ3B820 660 aa19.24■□□□□ 0.67
PSMC3-213ENST00000619920 SIRT2Q8IXJ6 389 aa19.24■□□□□ 0.67
PSMC3-213ENST00000619920 ANKRD44Q8N8A2 993 aa19.23■□□□□ 0.67
PSMC3-213ENST00000619920 NUCB1Q02818 461 aa19.23■□□□□ 0.67
PSMC3-213ENST00000619920 TTC5Q8N0Z6 440 aa19.23■□□□□ 0.67
PSMC3-213ENST00000619920 MEIS3Q99687 375 aa19.23■□□□□ 0.67
PSMC3-213ENST00000619920 PHAXQ9H814 394 aaKnown RBP19.23■□□□□ 0.67
PSMC3-213ENST00000619920 N4BP2Q86UW6 1770 aaPredicted RBP19.22■□□□□ 0.67
PSMC3-213ENST00000619920 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
PSMC3-213ENST00000619920 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
PSMC3-213ENST00000619920 GNAI3P08754 354 aa19.21■□□□□ 0.67
PSMC3-213ENST00000619920 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
PSMC3-213ENST00000619920 FMNL2Q96PY5 1086 aa19.2■□□□□ 0.66
PSMC3-213ENST00000619920 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
PSMC3-213ENST00000619920 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
PSMC3-213ENST00000619920 C8orf34Q49A92 452 aa19.19■□□□□ 0.66
PSMC3-213ENST00000619920 CEP85Q6P2H3 762 aa19.19■□□□□ 0.66
PSMC3-213ENST00000619920 ZNF496Q96IT1 587 aaPredicted RBP19.19■□□□□ 0.66
PSMC3-213ENST00000619920 DISP2A7MBM2 1401 aa19.19■□□□□ 0.66
PSMC3-213ENST00000619920 GNAI2P04899 355 aa19.19■□□□□ 0.66
PSMC3-213ENST00000619920 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
PSMC3-213ENST00000619920 CHD1LQ86WJ1 897 aa19.19■□□□□ 0.66
PSMC3-213ENST00000619920 DCTPP1Q9H773 170 aa19.19■□□□□ 0.66
PSMC3-213ENST00000619920 SHANK3Q9BYB0 1731 aa19.18■□□□□ 0.66
PSMC3-213ENST00000619920 DDX54Q8TDD1 881 aaKnown RBP19.18■□□□□ 0.66
PSMC3-213ENST00000619920 DNAAF4Q8WXU2 420 aa19.18■□□□□ 0.66
PSMC3-213ENST00000619920 PRAMEF22A3QJZ6 481 aa19.17■□□□□ 0.66
PSMC3-213ENST00000619920 HMMRO75330 724 aa19.17■□□□□ 0.66
PSMC3-213ENST00000619920 SRCIN1Q9C0H9 1055 aa19.17■□□□□ 0.66
PSMC3-213ENST00000619920 USP35Q9P2H5 1018 aa19.17■□□□□ 0.66
PSMC3-213ENST00000619920 PI4KAP2A4QPH2 592 aa19.16■□□□□ 0.66
PSMC3-213ENST00000619920 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
PSMC3-213ENST00000619920 PDIA6Q15084 440 aa19.16■□□□□ 0.66
PSMC3-213ENST00000619920 KSR2Q6VAB6 950 aa19.16■□□□□ 0.66
PSMC3-213ENST00000619920 PI4KAP1Q8N8J0 262 aa19.16■□□□□ 0.66
PSMC3-213ENST00000619920 ADCY9O60503 1353 aa19.16■□□□□ 0.66
PSMC3-213ENST00000619920 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
PSMC3-213ENST00000619920 BEND3Q5T5X7 828 aa19.15■□□□□ 0.66
PSMC3-213ENST00000619920 CDCA7Q9BWT1 371 aaPredicted RBP19.15■□□□□ 0.66
PSMC3-213ENST00000619920 PLCH1Q4KWH8 1693 aa19.15■□□□□ 0.66
PSMC3-213ENST00000619920 ANXA1P04083 346 aa19.15■□□□□ 0.66
PSMC3-213ENST00000619920 PROSER3Q2NL68 480 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms