RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 PIGBQ92521 554 aa12.55□□□□□ -0.4
SYN3-213ENST00000619146 NMRK2Q9NPI5 230 aa12.55□□□□□ -0.4
SYN3-213ENST00000619146 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
SYN3-213ENST00000619146 RTL1A6NKG5 1358 aa12.55□□□□□ -0.4
SYN3-213ENST00000619146 PXDNLA1KZ92 1463 aa12.54□□□□□ -0.4
SYN3-213ENST00000619146 A0A0G2JLW4 131 aa12.54□□□□□ -0.4
SYN3-213ENST00000619146 PANK3Q9H999 370 aa12.54□□□□□ -0.4
SYN3-213ENST00000619146 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
SYN3-213ENST00000619146 ANKRD26Q9UPS8 1709 aa12.54□□□□□ -0.4
SYN3-213ENST00000619146 FYB1O15117 783 aa12.53□□□□□ -0.4
SYN3-213ENST00000619146 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
SYN3-213ENST00000619146 MMP10P09238 476 aa12.53□□□□□ -0.4
SYN3-213ENST00000619146 ITPK1Q13572 414 aa12.53□□□□□ -0.4
SYN3-213ENST00000619146 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
SYN3-213ENST00000619146 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
SYN3-213ENST00000619146 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
SYN3-213ENST00000619146 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
SYN3-213ENST00000619146 APLP1P51693 650 aa12.52□□□□□ -0.41
SYN3-213ENST00000619146 SIK1P57059 783 aa12.52□□□□□ -0.41
SYN3-213ENST00000619146 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
SYN3-213ENST00000619146 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
SYN3-213ENST00000619146 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
SYN3-213ENST00000619146 ATP6V1AP38606 617 aa12.51□□□□□ -0.41
SYN3-213ENST00000619146 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
SYN3-213ENST00000619146 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
SYN3-213ENST00000619146 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
SYN3-213ENST00000619146 ANP32CO43423 234 aa12.5□□□□□ -0.41
SYN3-213ENST00000619146 SSFA2P28290 1259 aa12.5□□□□□ -0.41
SYN3-213ENST00000619146 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
SYN3-213ENST00000619146 INSRP06213 1382 aa12.5□□□□□ -0.41
SYN3-213ENST00000619146 FLT4P35916 1363 aa12.5□□□□□ -0.41
SYN3-213ENST00000619146 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
SYN3-213ENST00000619146 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
SYN3-213ENST00000619146 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
SYN3-213ENST00000619146 TOMM70O94826 608 aa12.49□□□□□ -0.41
SYN3-213ENST00000619146 FCHSD2O94868 740 aa12.49□□□□□ -0.41
SYN3-213ENST00000619146 DPEP1P16444 411 aa12.49□□□□□ -0.41
SYN3-213ENST00000619146 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
SYN3-213ENST00000619146 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
SYN3-213ENST00000619146 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
SYN3-213ENST00000619146 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
SYN3-213ENST00000619146 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
SYN3-213ENST00000619146 TJP1Q07157 1748 aa12.47□□□□□ -0.41
SYN3-213ENST00000619146 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
SYN3-213ENST00000619146 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
SYN3-213ENST00000619146 ZNF831Q5JPB2 1677 aa12.46□□□□□ -0.41
SYN3-213ENST00000619146 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.41
SYN3-213ENST00000619146 ATG3Q9NT62 314 aa12.46□□□□□ -0.41
SYN3-213ENST00000619146 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
SYN3-213ENST00000619146 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.42
SYN3-213ENST00000619146 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
SYN3-213ENST00000619146 SLC4A9Q96Q91 983 aa12.45□□□□□ -0.42
SYN3-213ENST00000619146 RTCBQ9Y3I0 505 aaKnown RBP12.45□□□□□ -0.42
SYN3-213ENST00000619146 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
SYN3-213ENST00000619146 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
SYN3-213ENST00000619146 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
SYN3-213ENST00000619146 RALBP1Q15311 655 aa12.44□□□□□ -0.42
SYN3-213ENST00000619146 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
SYN3-213ENST00000619146 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
SYN3-213ENST00000619146 KLRG1Q96E93 195 aa12.44□□□□□ -0.42
SYN3-213ENST00000619146 EYA1Q99502 592 aa12.44□□□□□ -0.42
SYN3-213ENST00000619146 RRAGCQ9HB90 399 aa12.44□□□□□ -0.42
SYN3-213ENST00000619146 CCDC87Q9NVE4 849 aa12.44□□□□□ -0.42
SYN3-213ENST00000619146 PHKG2P15735 406 aa12.43□□□□□ -0.42
SYN3-213ENST00000619146 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
SYN3-213ENST00000619146 TNNT2P45379 298 aaPredicted RBP12.43□□□□□ -0.42
SYN3-213ENST00000619146 TGFB2P61812 414 aa12.43□□□□□ -0.42
SYN3-213ENST00000619146 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
SYN3-213ENST00000619146 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
SYN3-213ENST00000619146 PARP3Q9Y6F1 533 aa12.43□□□□□ -0.42
SYN3-213ENST00000619146 GYS1P13807 737 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 KCNA3P22001 575 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 CHRNA5P30532 468 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 RFC4P35249 363 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 IFNL2Q8IZJ0 200 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 MIER1Q8N108 512 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
SYN3-213ENST00000619146 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
SYN3-213ENST00000619146 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 KDRP35968 1356 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
SYN3-213ENST00000619146 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
SYN3-213ENST00000619146 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
SYN3-213ENST00000619146 RASSF7Q02833 373 aa12.4□□□□□ -0.42
SYN3-213ENST00000619146 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
SYN3-213ENST00000619146 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
SYN3-213ENST00000619146 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
SYN3-213ENST00000619146 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
SYN3-213ENST00000619146 FKBP8Q14318 412 aa12.39□□□□□ -0.43
SYN3-213ENST00000619146 PIM2Q9P1W9 311 aa12.39□□□□□ -0.43
SYN3-213ENST00000619146 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
SYN3-213ENST00000619146 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
SYN3-213ENST00000619146 KDM2BQ8NHM5 1336 aa12.38□□□□□ -0.43
SYN3-213ENST00000619146 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
SYN3-213ENST00000619146 DDR1Q08345 913 aa12.38□□□□□ -0.43
SYN3-213ENST00000619146 DALRD3Q5D0E6 543 aaKnown RBP12.38□□□□□ -0.43
SYN3-213ENST00000619146 MORC1Q86VD1 984 aa12.38□□□□□ -0.43
SYN3-213ENST00000619146 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
SYN3-213ENST00000619146 EIF4A2Q14240 407 aaKnown RBP12.37□□□□□ -0.43
SYN3-213ENST00000619146 JMYQ8N9B5 988 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms