RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ANKRD26Q9UPS8 1709 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 MST1RQ04912 1400 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 NCOA3Q9Y6Q9 1424 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 ELL2O00472 640 aaPredicted RBP8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 RARSP54136 660 aaKnown RBP8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 TMCO4Q5TGY1 634 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 PKNOX2Q96KN3 472 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
SRGAP3-213ENST00000618999 NWD1Q149M9 1564 aa8.67□□□□□ -1.02
SRGAP3-213ENST00000618999 CHRNA2Q15822 529 aa8.67□□□□□ -1.02
SRGAP3-213ENST00000618999 LRRC59Q96AG4 307 aaKnown RBP8.67□□□□□ -1.02
SRGAP3-213ENST00000618999 SHPRHQ149N8 1683 aa8.67□□□□□ -1.02
SRGAP3-213ENST00000618999 IPO8O15397 1037 aaKnown RBP8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 MCM10Q7L590 875 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 NLRP2Q9NX02 1062 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 GNAI1P63096 354 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 DDX19BQ9UMR2 479 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 PROM2Q8N271 834 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 GAS2L2Q8NHY3 880 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 DCCP43146 1447 aa8.66□□□□□ -1.02
SRGAP3-213ENST00000618999 MVPQ14764 893 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-213ENST00000618999 MTHFSDQ2M296 383 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-213ENST00000618999 NBPF6Q5VWK0 638 aa8.65□□□□□ -1.02
SRGAP3-213ENST00000618999 NBPF4Q96M43 638 aa8.65□□□□□ -1.02
SRGAP3-213ENST00000618999 CHMP4BQ9H444 224 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-213ENST00000618999 ISY1Q9ULR0 285 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-213ENST00000618999 LRRC7Q96NW7 1537 aa8.65□□□□□ -1.02
SRGAP3-213ENST00000618999 SKOR2Q2VWA4 1001 aaPredicted RBP8.65□□□□□ -1.03
SRGAP3-213ENST00000618999 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.03
SRGAP3-213ENST00000618999 XRCC6P12956 609 aaKnown RBP eCLIP8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 PRDM11Q9NQV5 511 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 IL16Q14005 1332 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 SPATA31A3Q5VYP0 1347 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 IGSF1Q8N6C5 1336 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 ARHGEF10O15013 1369 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 KIF24Q5T7B8 1368 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 NCLP19338 710 aaKnown RBP8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 NRKQ7Z2Y5 1582 aa8.64□□□□□ -1.03
SRGAP3-213ENST00000618999 GRPEL1Q9HAV7 217 aa8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 AXIN2Q9Y2T1 843 aa8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 RIOK3O14730 519 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 MSNP26038 577 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 PIP4K2BP78356 416 aa8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 MIS18AQ9NYP9 233 aa8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 USP19O94966 1318 aa8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 ZFP91Q96JP5 570 aaPredicted RBP8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 IFT57Q9NWB7 429 aa8.63□□□□□ -1.03
SRGAP3-213ENST00000618999 RAPGEF4Q8WZA2 1011 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 STRCQ7RTU9 1775 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 GNAT3A8MTJ3 354 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 CLCN1P35523 988 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 PLEKHO1Q53GL0 409 aaPredicted RBP8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 MBIPQ9NS73 344 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 RTL1A6NKG5 1358 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 ESPNB1AK53 854 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 RLBP1P12271 317 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 EVA1CP58658 441 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 PANK2Q9BZ23 570 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 STRCP1A6NGW2 1772 aa8.62□□□□□ -1.03
SRGAP3-213ENST00000618999 CT47B1P0C2W7 299 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 ZNF530Q6P9A1 599 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 TSPYL4Q9UJ04 414 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 C1orf141Q5JVX7 400 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 SSH1Q8WYL5 1049 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 PYGBP11216 843 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 TWISTNBQ3B726 338 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 ANTXR1Q9H6X2 564 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
SRGAP3-213ENST00000618999 KIAA0232Q92628 1395 aa8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 KIF16BQ96L93 1317 aa8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 RRP9O43818 475 aaKnown RBP8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 TNNQ9UQP3 1299 aa8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 TOM1L2Q6ZVM7 507 aa8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 TSPYL6Q8N831 410 aa8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 TEFQ10587 303 aa8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 ATF7IPQ6VMQ6 1270 aa8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 DDX49Q9Y6V7 483 aaKnown RBP8.6□□□□□ -1.03
SRGAP3-213ENST00000618999 ANKRD45Q5TZF3 282 aa8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 C8orf58Q8NAV2 365 aa8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 PEAK1Q9H792 1746 aa8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 KDRP35968 1356 aa8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 ERBB3P21860 1342 aa8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 TATP17735 454 aaPredicted RBP8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 MPRIPQ6WCQ1 1025 aa8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
SRGAP3-213ENST00000618999 TOM1O60784 492 aa8.59□□□□□ -1.04
SRGAP3-213ENST00000618999 KRT24Q2M2I5 525 aa8.59□□□□□ -1.04
SRGAP3-213ENST00000618999 AMOTQ4VCS5 1084 aa8.59□□□□□ -1.04
SRGAP3-213ENST00000618999 CASC1Q6TDU7 716 aa8.59□□□□□ -1.04
SRGAP3-213ENST00000618999 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms