RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 DIAPH1O60610 1272 aaKnown RBP29.85■■■□□ 2.37
SYNGR3-206ENST00000618464 SIK1P57059 783 aa29.85■■■□□ 2.37
SYNGR3-206ENST00000618464 ERVV-2B6SEH9 535 aa29.84■■■□□ 2.37
SYNGR3-206ENST00000618464 ATG3Q9NT62 314 aa29.84■■■□□ 2.37
SYNGR3-206ENST00000618464 CHD4Q14839 1912 aa29.84■■■□□ 2.37
SYNGR3-206ENST00000618464 C4BP0C0L5 1744 aa29.83■■■□□ 2.37
SYNGR3-206ENST00000618464 AMIGO3Q86WK7 504 aa29.82■■■□□ 2.36
SYNGR3-206ENST00000618464 PELP1Q8IZL8 1130 aaKnown RBP29.82■■■□□ 2.36
SYNGR3-206ENST00000618464 AK7Q96M32 723 aa29.82■■■□□ 2.36
SYNGR3-206ENST00000618464 CABP4P57796 275 aa29.81■■■□□ 2.36
SYNGR3-206ENST00000618464 HMGB2P26583 209 aaKnown RBP29.8■■■□□ 2.36
SYNGR3-206ENST00000618464 SMIM5Q71RC9 77 aa29.8■■■□□ 2.36
SYNGR3-206ENST00000618464 LINC00116Q8NCU8 138 aa29.8■■■□□ 2.36
SYNGR3-206ENST00000618464 FLAD1Q8NFF5 587 aa29.8■■■□□ 2.36
SYNGR3-206ENST00000618464 ATP6V1AP38606 617 aa29.79■■■□□ 2.36
SYNGR3-206ENST00000618464 ITPK1Q13572 414 aa29.79■■■□□ 2.36
SYNGR3-206ENST00000618464 COL3A1P02461 1466 aaPredicted RBP29.79■■■□□ 2.36
SYNGR3-206ENST00000618464 GOLGB1Q14789 3259 aaKnown RBP29.77■■■□□ 2.36
SYNGR3-206ENST00000618464 U2SURPO15042 1029 aaKnown RBP29.76■■■□□ 2.35
SYNGR3-206ENST00000618464 PHF14O94880 888 aa29.76■■■□□ 2.35
SYNGR3-206ENST00000618464 RBM42Q9BTD8 480 aaKnown RBP29.76■■■□□ 2.35
SYNGR3-206ENST00000618464 AKAP4Q5JQC9 854 aa29.74■■■□□ 2.35
SYNGR3-206ENST00000618464 YBX3P16989 372 aaKnown RBP eCLIP29.73■■■□□ 2.351e-6■■■■□ 19.6
SYNGR3-206ENST00000618464 NFATC2IPQ8NCF5 419 aa29.73■■■□□ 2.35
SYNGR3-206ENST00000618464 UBR3Q6ZT12 1888 aa29.73■■■□□ 2.35
SYNGR3-206ENST00000618464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.72■■■□□ 2.35
SYNGR3-206ENST00000618464 SLC4A9Q96Q91 983 aa29.72■■■□□ 2.35
SYNGR3-206ENST00000618464 GNPATO15228 680 aa29.71■■■□□ 2.35
SYNGR3-206ENST00000618464 MTHFSDQ2M296 383 aaKnown RBP29.71■■■□□ 2.35
SYNGR3-206ENST00000618464 SCN11AQ9UI33 1791 aa29.71■■■□□ 2.35
SYNGR3-206ENST00000618464 CFAP53Q96M91 514 aa29.69■■■□□ 2.34
SYNGR3-206ENST00000618464 LGR6Q9HBX8 967 aa29.69■■■□□ 2.34
SYNGR3-206ENST00000618464 PTCD1O75127 700 aaKnown RBP29.68■■■□□ 2.34
SYNGR3-206ENST00000618464 CD2APQ9Y5K6 639 aa29.68■■■□□ 2.34
SYNGR3-206ENST00000618464 SSFA2P28290 1259 aa29.67■■■□□ 2.34
SYNGR3-206ENST00000618464 PPP2R1AP30153 589 aa29.67■■■□□ 2.34
SYNGR3-206ENST00000618464 RNMTO43148 476 aaKnown RBP29.66■■■□□ 2.34
SYNGR3-206ENST00000618464 ZNF831Q5JPB2 1677 aa29.64■■■□□ 2.34
SYNGR3-206ENST00000618464 GRIN3BO60391 1043 aa29.64■■■□□ 2.34
SYNGR3-206ENST00000618464 SLC52A2Q9HAB3 445 aa29.64■■■□□ 2.34
SYNGR3-206ENST00000618464 VIRMAQ69YN4 1812 aaKnown RBP29.62■■■□□ 2.33
SYNGR3-206ENST00000618464 COL5A3P25940 1745 aaPredicted RBP29.62■■■□□ 2.33
SYNGR3-206ENST00000618464 MRC1P22897 1456 aa29.61■■■□□ 2.33
SYNGR3-206ENST00000618464 RTCBQ9Y3I0 505 aaKnown RBP29.6■■■□□ 2.33
SYNGR3-206ENST00000618464 NUDCQ9Y266 331 aa29.59■■■□□ 2.33
SYNGR3-206ENST00000618464 PRKAR2BP31323 418 aa29.58■■■□□ 2.33
SYNGR3-206ENST00000618464 SLC39A6Q13433 755 aa29.58■■■□□ 2.33
SYNGR3-206ENST00000618464 CNTNAP4Q9C0A0 1308 aa29.58■■■□□ 2.33
SYNGR3-206ENST00000618464 ADAMTS7Q9UKP4 1686 aa29.57■■■□□ 2.32
SYNGR3-206ENST00000618464 C1QTNF8P60827 252 aa29.57■■■□□ 2.32
SYNGR3-206ENST00000618464 RC3H1Q5TC82 1133 aaKnown RBP29.57■■■□□ 2.32
SYNGR3-206ENST00000618464 GAS2L2Q8NHY3 880 aa29.57■■■□□ 2.32
SYNGR3-206ENST00000618464 RSPH6AQ9H0K4 717 aa29.57■■■□□ 2.32
SYNGR3-206ENST00000618464 U2AF1L5P0DN76 240 aaPredicted RBP29.56■■■□□ 2.32
SYNGR3-206ENST00000618464 U2AF1Q01081 240 aaKnown RBP eCLIP29.56■■■□□ 2.32
SYNGR3-206ENST00000618464 TRAPPC3LQ5T215 181 aa29.56■■■□□ 2.32
SYNGR3-206ENST00000618464 TJP1Q07157 1748 aa29.56■■■□□ 2.32
SYNGR3-206ENST00000618464 PHACTR3Q96KR7 559 aa29.55■■■□□ 2.32
SYNGR3-206ENST00000618464 WWC3Q9ULE0 1092 aa29.55■■■□□ 2.32
SYNGR3-206ENST00000618464 CRKLP46109 303 aaKnown RBP29.54■■■□□ 2.32
SYNGR3-206ENST00000618464 MYH14Q7Z406 1995 aaKnown RBP29.53■■■□□ 2.32
SYNGR3-206ENST00000618464 GNAT3A8MTJ3 354 aa29.53■■■□□ 2.32
SYNGR3-206ENST00000618464 RPS6KA4O75676 772 aa29.53■■■□□ 2.32
SYNGR3-206ENST00000618464 ARHGEF1Q92888 912 aaKnown RBP29.53■■■□□ 2.32
SYNGR3-206ENST00000618464 MMP10P09238 476 aa29.51■■■□□ 2.31
SYNGR3-206ENST00000618464 DNAJC10Q8IXB1 793 aa29.51■■■□□ 2.31
SYNGR3-206ENST00000618464 KCPQ6ZWJ8 1503 aa29.5■■■□□ 2.31
SYNGR3-206ENST00000618464 CICQ96RK0 1608 aaPredicted RBP29.5■■■□□ 2.31
SYNGR3-206ENST00000618464 ADRA2BP18089 450 aa29.5■■■□□ 2.31
SYNGR3-206ENST00000618464 IL17REQ8NFR9 667 aa29.5■■■□□ 2.31
SYNGR3-206ENST00000618464 GIGYF1O75420 1035 aaPredicted RBP29.49■■■□□ 2.31
SYNGR3-206ENST00000618464 RFC4P35249 363 aa29.49■■■□□ 2.31
SYNGR3-206ENST00000618464 TEFQ10587 303 aa29.49■■■□□ 2.31
SYNGR3-206ENST00000618464 SENP3-EIF4A1A0A087X0R7 540 aa29.47■■■□□ 2.31
SYNGR3-206ENST00000618464 C4AP0C0L4 1744 aa29.47■■■□□ 2.31
SYNGR3-206ENST00000618464 INTS5Q6P9B9 1019 aaKnown RBP29.46■■■□□ 2.31
SYNGR3-206ENST00000618464 FCHSD2O94868 740 aa29.45■■■□□ 2.31
SYNGR3-206ENST00000618464 DDX10Q13206 875 aaKnown RBP29.45■■■□□ 2.31
SYNGR3-206ENST00000618464 TTC5Q8N0Z6 440 aa29.45■■■□□ 2.31
SYNGR3-206ENST00000618464 NLGN1Q8N2Q7 840 aa29.45■■■□□ 2.31
SYNGR3-206ENST00000618464 ATP10DQ9P241 1426 aa29.45■■■□□ 2.3
SYNGR3-206ENST00000618464 GYS1P13807 737 aa29.44■■■□□ 2.3
SYNGR3-206ENST00000618464 CCDC87Q9NVE4 849 aa29.44■■■□□ 2.3
SYNGR3-206ENST00000618464 SRP68Q9UHB9 627 aaKnown RBP29.43■■■□□ 2.3
SYNGR3-206ENST00000618464 UBR2Q8IWV8 1755 aa29.43■■■□□ 2.3
SYNGR3-206ENST00000618464 SIPA1L3O60292 1781 aaPredicted RBP29.42■■■□□ 2.3
SYNGR3-206ENST00000618464 CYP19A1P11511 503 aaPredicted RBP29.42■■■□□ 2.3
SYNGR3-206ENST00000618464 CEMIPQ8WUJ3 1361 aa29.4■■■□□ 2.3
SYNGR3-206ENST00000618464 PXDNLA1KZ92 1463 aa29.4■■■□□ 2.3
SYNGR3-206ENST00000618464 KIF13BQ9NQT8 1826 aa29.39■■■□□ 2.3
SYNGR3-206ENST00000618464 ZNF790Q6PG37 636 aa29.39■■■□□ 2.3
SYNGR3-206ENST00000618464 VSIG10Q8N0Z9 540 aa29.39■■■□□ 2.3
SYNGR3-206ENST00000618464 ZNF496Q96IT1 587 aaPredicted RBP29.39■■■□□ 2.3
SYNGR3-206ENST00000618464 KIAA1551Q9HCM1 1747 aa29.39■■■□□ 2.3
SYNGR3-206ENST00000618464 ADCY9O60503 1353 aa29.39■■■□□ 2.29
SYNGR3-206ENST00000618464 MCM10Q7L590 875 aa29.38■■■□□ 2.29
SYNGR3-206ENST00000618464 RTF1Q92541 710 aaKnown RBP29.38■■■□□ 2.29
SYNGR3-206ENST00000618464 ZBTB1Q9Y2K1 713 aa29.38■■■□□ 2.29
SYNGR3-206ENST00000618464 SOS1Q07889 1333 aaPredicted RBP29.38■■■□□ 2.29
SYNGR3-206ENST00000618464 USP42Q9H9J4 1324 aaKnown RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms