RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 HSPA1AP0DMV8 641 aaKnown RBP12.98□□□□□ -0.33
PSMB3-210ENST00000618159 HSPA1BP0DMV9 641 aaKnown RBP12.98□□□□□ -0.33
PSMB3-210ENST00000618159 DPEP1P16444 411 aa12.98□□□□□ -0.33
PSMB3-210ENST00000618159 SIK1P57059 783 aa12.98□□□□□ -0.33
PSMB3-210ENST00000618159 COG3Q96JB2 828 aa12.98□□□□□ -0.33
PSMB3-210ENST00000618159 ITPK1Q13572 414 aa12.97□□□□□ -0.33
PSMB3-210ENST00000618159 RRS1Q15050 365 aaKnown RBP12.97□□□□□ -0.33
PSMB3-210ENST00000618159 RRAGCQ9HB90 399 aa12.97□□□□□ -0.33
PSMB3-210ENST00000618159 MYH14Q7Z406 1995 aaKnown RBP12.97□□□□□ -0.33
PSMB3-210ENST00000618159 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.33
PSMB3-210ENST00000618159 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
PSMB3-210ENST00000618159 SLC34A2O95436 690 aa12.96□□□□□ -0.33
PSMB3-210ENST00000618159 KCNA3P22001 575 aa12.96□□□□□ -0.33
PSMB3-210ENST00000618159 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.34
PSMB3-210ENST00000618159 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
PSMB3-210ENST00000618159 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
PSMB3-210ENST00000618159 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
PSMB3-210ENST00000618159 KIF20BQ96Q89 1820 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 TMF1P82094 1093 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
PSMB3-210ENST00000618159 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 PUS7Q96PZ0 661 aaKnown RBP12.93□□□□□ -0.34
PSMB3-210ENST00000618159 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 INSRP06213 1382 aa12.93□□□□□ -0.34
PSMB3-210ENST00000618159 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
PSMB3-210ENST00000618159 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
PSMB3-210ENST00000618159 GYS1P13807 737 aa12.91□□□□□ -0.34
PSMB3-210ENST00000618159 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
PSMB3-210ENST00000618159 KDRP35968 1356 aa12.91□□□□□ -0.34
PSMB3-210ENST00000618159 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
PSMB3-210ENST00000618159 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
PSMB3-210ENST00000618159 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
PSMB3-210ENST00000618159 TMOD3Q9NYL9 352 aa12.9□□□□□ -0.34
PSMB3-210ENST00000618159 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
PSMB3-210ENST00000618159 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
PSMB3-210ENST00000618159 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
PSMB3-210ENST00000618159 FYB1O15117 783 aa12.89□□□□□ -0.35
PSMB3-210ENST00000618159 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
PSMB3-210ENST00000618159 GGNBP2Q9H3C7 697 aa12.89□□□□□ -0.35
PSMB3-210ENST00000618159 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
PSMB3-210ENST00000618159 FLT4P35916 1363 aa12.89□□□□□ -0.35
PSMB3-210ENST00000618159 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
PSMB3-210ENST00000618159 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
PSMB3-210ENST00000618159 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
PSMB3-210ENST00000618159 DLEC1Q9Y238 1755 aa12.88□□□□□ -0.35
PSMB3-210ENST00000618159 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
PSMB3-210ENST00000618159 KIF24Q5T7B8 1368 aa12.87□□□□□ -0.35
PSMB3-210ENST00000618159 ADRA2BP18089 450 aa12.87□□□□□ -0.35
PSMB3-210ENST00000618159 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
PSMB3-210ENST00000618159 DICER1Q9UPY3 1922 aaKnown RBP12.87□□□□□ -0.35
PSMB3-210ENST00000618159 RASSF7Q02833 373 aa12.86□□□□□ -0.35
PSMB3-210ENST00000618159 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
PSMB3-210ENST00000618159 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
PSMB3-210ENST00000618159 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
PSMB3-210ENST00000618159 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
PSMB3-210ENST00000618159 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
PSMB3-210ENST00000618159 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
PSMB3-210ENST00000618159 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
PSMB3-210ENST00000618159 CHRNA5P30532 468 aa12.85□□□□□ -0.35
PSMB3-210ENST00000618159 RFC4P35249 363 aa12.85□□□□□ -0.35
PSMB3-210ENST00000618159 TESK2Q96S53 571 aa12.85□□□□□ -0.35
PSMB3-210ENST00000618159 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
PSMB3-210ENST00000618159 VIRMAQ69YN4 1812 aaKnown RBP12.84□□□□□ -0.35
PSMB3-210ENST00000618159 GLTPD2A6NH11 291 aa12.84□□□□□ -0.35
PSMB3-210ENST00000618159 PHKG2P15735 406 aa12.84□□□□□ -0.35
PSMB3-210ENST00000618159 DDR1Q08345 913 aa12.84□□□□□ -0.35
PSMB3-210ENST00000618159 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
PSMB3-210ENST00000618159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
PSMB3-210ENST00000618159 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
PSMB3-210ENST00000618159 TJP1Q07157 1748 aa12.82□□□□□ -0.36
PSMB3-210ENST00000618159 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
PSMB3-210ENST00000618159 POTECB2RU33 542 aa12.82□□□□□ -0.36
PSMB3-210ENST00000618159 FOXN1O15353 648 aa12.82□□□□□ -0.36
PSMB3-210ENST00000618159 FKBP8Q14318 412 aa12.82□□□□□ -0.36
PSMB3-210ENST00000618159 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
PSMB3-210ENST00000618159 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
PSMB3-210ENST00000618159 EYA1Q99502 592 aa12.81□□□□□ -0.36
PSMB3-210ENST00000618159 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
PSMB3-210ENST00000618159 MKRN1Q9UHC7 482 aaKnown RBP12.81□□□□□ -0.36
PSMB3-210ENST00000618159 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
PSMB3-210ENST00000618159 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
PSMB3-210ENST00000618159 LMNB1P20700 586 aa12.8□□□□□ -0.36
PSMB3-210ENST00000618159 USP42Q9H9J4 1324 aaKnown RBP12.8□□□□□ -0.36
PSMB3-210ENST00000618159 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
PSMB3-210ENST00000618159 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
PSMB3-210ENST00000618159 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
PSMB3-210ENST00000618159 TM4SF1P30408 202 aa12.78□□□□□ -0.36
PSMB3-210ENST00000618159 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
PSMB3-210ENST00000618159 ANKRD31Q8N7Z5 1873 aa12.77□□□□□ -0.37
PSMB3-210ENST00000618159 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
PSMB3-210ENST00000618159 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
PSMB3-210ENST00000618159 CNTNAP1P78357 1384 aa12.77□□□□□ -0.37
PSMB3-210ENST00000618159 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
PSMB3-210ENST00000618159 NFKBIEO00221 500 aa12.76□□□□□ -0.37
PSMB3-210ENST00000618159 PPM1GO15355 546 aaPredicted RBP12.76□□□□□ -0.37
PSMB3-210ENST00000618159 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms