RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 CCT4P50991 539 aaKnown RBP17.35■□□□□ 0.37
CBWD1-226ENST00000618061 HSPA2P54652 639 aa17.35■□□□□ 0.37
CBWD1-226ENST00000618061 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
CBWD1-226ENST00000618061 PXDNQ92626 1479 aa17.35■□□□□ 0.37
CBWD1-226ENST00000618061 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
CBWD1-226ENST00000618061 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
CBWD1-226ENST00000618061 ANXA1P04083 346 aa17.33■□□□□ 0.37
CBWD1-226ENST00000618061 SLIT3O75094 1523 aa17.33■□□□□ 0.36
CBWD1-226ENST00000618061 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
CBWD1-226ENST00000618061 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
CBWD1-226ENST00000618061 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
CBWD1-226ENST00000618061 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
CBWD1-226ENST00000618061 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
CBWD1-226ENST00000618061 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
CBWD1-226ENST00000618061 ATF3P18847 181 aa17.31■□□□□ 0.36
CBWD1-226ENST00000618061 TEFQ10587 303 aa17.31■□□□□ 0.36
CBWD1-226ENST00000618061 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
CBWD1-226ENST00000618061 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
CBWD1-226ENST00000618061 EXOC6BQ9Y2D4 811 aa17.31■□□□□ 0.36
CBWD1-226ENST00000618061 GNAI2P04899 355 aa17.3■□□□□ 0.36
CBWD1-226ENST00000618061 PNMA6EA0A0J9YXQ4 647 aa17.3■□□□□ 0.36
CBWD1-226ENST00000618061 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
CBWD1-226ENST00000618061 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
CBWD1-226ENST00000618061 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
CBWD1-226ENST00000618061 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
CBWD1-226ENST00000618061 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
CBWD1-226ENST00000618061 ANTXR1Q9H6X2 564 aa17.29■□□□□ 0.36
CBWD1-226ENST00000618061 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
CBWD1-226ENST00000618061 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
CBWD1-226ENST00000618061 MED1Q15648 1581 aaPredicted RBP17.28■□□□□ 0.36
CBWD1-226ENST00000618061 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
CBWD1-226ENST00000618061 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
CBWD1-226ENST00000618061 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
CBWD1-226ENST00000618061 MST1RQ04912 1400 aa17.28■□□□□ 0.36
CBWD1-226ENST00000618061 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
CBWD1-226ENST00000618061 CDC45O75419 566 aa17.27■□□□□ 0.36
CBWD1-226ENST00000618061 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
CBWD1-226ENST00000618061 KIF1AQ12756 1690 aa17.27■□□□□ 0.35
CBWD1-226ENST00000618061 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 HMMRO75330 724 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 KIF2CQ99661 725 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
CBWD1-226ENST00000618061 ERBB3P21860 1342 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 NLRP2Q9NX02 1062 aa17.26■□□□□ 0.35
CBWD1-226ENST00000618061 SDSP20132 328 aa17.25■□□□□ 0.35
CBWD1-226ENST00000618061 GNAI3P08754 354 aa17.25■□□□□ 0.35
CBWD1-226ENST00000618061 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
CBWD1-226ENST00000618061 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
CBWD1-226ENST00000618061 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
CBWD1-226ENST00000618061 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
CBWD1-226ENST00000618061 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
CBWD1-226ENST00000618061 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
CBWD1-226ENST00000618061 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
CBWD1-226ENST00000618061 HSCBQ8IWL3 235 aa17.23■□□□□ 0.35
CBWD1-226ENST00000618061 SOS1Q07889 1333 aaPredicted RBP17.23■□□□□ 0.35
CBWD1-226ENST00000618061 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
CBWD1-226ENST00000618061 CSB-PGBD3P0DP91 1061 aa17.21■□□□□ 0.35
CBWD1-226ENST00000618061 SLC39A6Q13433 755 aa17.21■□□□□ 0.35
CBWD1-226ENST00000618061 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
CBWD1-226ENST00000618061 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.34
CBWD1-226ENST00000618061 PDE1AP54750 535 aa17.21■□□□□ 0.34
CBWD1-226ENST00000618061 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
CBWD1-226ENST00000618061 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
CBWD1-226ENST00000618061 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
CBWD1-226ENST00000618061 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
CBWD1-226ENST00000618061 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
CBWD1-226ENST00000618061 DNAAF4Q8WXU2 420 aa17.19■□□□□ 0.34
CBWD1-226ENST00000618061 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
CBWD1-226ENST00000618061 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
CBWD1-226ENST00000618061 ADCY9O60503 1353 aa17.19■□□□□ 0.34
CBWD1-226ENST00000618061 BEND3Q5T5X7 828 aa17.19■□□□□ 0.34
CBWD1-226ENST00000618061 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
CBWD1-226ENST00000618061 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
CBWD1-226ENST00000618061 HOXB7P09629 217 aa17.18■□□□□ 0.34
CBWD1-226ENST00000618061 MEGF6O75095 1541 aa17.17■□□□□ 0.34
CBWD1-226ENST00000618061 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
CBWD1-226ENST00000618061 NPHP3Q7Z494 1330 aa17.17■□□□□ 0.34
CBWD1-226ENST00000618061 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
CBWD1-226ENST00000618061 GSE1Q14687 1217 aa17.17■□□□□ 0.34
CBWD1-226ENST00000618061 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
CBWD1-226ENST00000618061 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
CBWD1-226ENST00000618061 MAP3K2Q9Y2U5 619 aa17.17■□□□□ 0.34
CBWD1-226ENST00000618061 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
CBWD1-226ENST00000618061 COL18A1P39060 1754 aa17.16■□□□□ 0.34
CBWD1-226ENST00000618061 HSP90AB1P08238 724 aaKnown RBP17.16■□□□□ 0.34
CBWD1-226ENST00000618061 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
CBWD1-226ENST00000618061 SALL3Q9BXA9 1300 aa17.15■□□□□ 0.34
CBWD1-226ENST00000618061 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
CBWD1-226ENST00000618061 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
CBWD1-226ENST00000618061 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
CBWD1-226ENST00000618061 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
CBWD1-226ENST00000618061 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
CBWD1-226ENST00000618061 SNX21Q969T3 373 aa17.15■□□□□ 0.34
CBWD1-226ENST00000618061 XIRP1Q702N8 1843 aaKnown RBP17.15■□□□□ 0.34
CBWD1-226ENST00000618061 KDM6AO15550 1401 aaPredicted RBP17.15■□□□□ 0.34
CBWD1-226ENST00000618061 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
CBWD1-226ENST00000618061 PHKG2P15735 406 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms