RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 ZNF853P0CG23 659 aa19.92■□□□□ 0.78
UPK1A-204ENST00000617999 CALD1Q05682 793 aaKnown RBP19.92■□□□□ 0.78
UPK1A-204ENST00000617999 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
UPK1A-204ENST00000617999 TSR2Q969E8 191 aaKnown RBP19.92■□□□□ 0.78
UPK1A-204ENST00000617999 BCL9O00512 1426 aa19.92■□□□□ 0.78
UPK1A-204ENST00000617999 KCPQ6ZWJ8 1503 aa19.92■□□□□ 0.78
UPK1A-204ENST00000617999 RXRBP28702 533 aa19.91■□□□□ 0.78
UPK1A-204ENST00000617999 SLC52A2Q9HAB3 445 aa19.91■□□□□ 0.78
UPK1A-204ENST00000617999 TNS1Q9HBL0 1735 aaKnown RBP19.9■□□□□ 0.78
UPK1A-204ENST00000617999 TEFQ10587 303 aa19.9■□□□□ 0.78
UPK1A-204ENST00000617999 TRMT2AQ8IZ69 625 aaKnown RBP19.9■□□□□ 0.78
UPK1A-204ENST00000617999 MBIPQ9NS73 344 aa19.9■□□□□ 0.78
UPK1A-204ENST00000617999 GNAI1P63096 354 aa19.89■□□□□ 0.77
UPK1A-204ENST00000617999 CFAP44Q96MT7 982 aa19.89■□□□□ 0.77
UPK1A-204ENST00000617999 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
UPK1A-204ENST00000617999 TJP1Q07157 1748 aa19.88■□□□□ 0.77
UPK1A-204ENST00000617999 CICQ96RK0 1608 aaPredicted RBP19.88■□□□□ 0.77
UPK1A-204ENST00000617999 FAM182BQ5T319 152 aa19.88■□□□□ 0.77
UPK1A-204ENST00000617999 CHL1O00533 1208 aa19.87■□□□□ 0.77
UPK1A-204ENST00000617999 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
UPK1A-204ENST00000617999 MIS18AQ9NYP9 233 aa19.87■□□□□ 0.77
UPK1A-204ENST00000617999 LY75O60449 1722 aa19.86■□□□□ 0.77
UPK1A-204ENST00000617999 ERVV-2B6SEH9 535 aa19.86■□□□□ 0.77
UPK1A-204ENST00000617999 CABP4P57796 275 aa19.86■□□□□ 0.77
UPK1A-204ENST00000617999 TSPYL4Q9UJ04 414 aa19.86■□□□□ 0.77
UPK1A-204ENST00000617999 TAF7Q15545 349 aaPredicted RBP19.85■□□□□ 0.77
UPK1A-204ENST00000617999 KRT27Q7Z3Y8 459 aa19.85■□□□□ 0.77
UPK1A-204ENST00000617999 ACSBG1Q96GR2 724 aa19.85■□□□□ 0.77
UPK1A-204ENST00000617999 KCNQ3O43525 872 aa19.84■□□□□ 0.77
UPK1A-204ENST00000617999 NFATC2IPQ8NCF5 419 aa19.84■□□□□ 0.77
UPK1A-204ENST00000617999 TMOD3Q9NYL9 352 aa19.84■□□□□ 0.77
UPK1A-204ENST00000617999 BTBD11A6QL63 1104 aa19.83■□□□□ 0.77
UPK1A-204ENST00000617999 KRT24Q2M2I5 525 aa19.83■□□□□ 0.77
UPK1A-204ENST00000617999 SLC39A6Q13433 755 aa19.82■□□□□ 0.76
UPK1A-204ENST00000617999 BABAM1Q9NWV8 329 aa19.82■□□□□ 0.76
UPK1A-204ENST00000617999 COL5A3P25940 1745 aaPredicted RBP19.82■□□□□ 0.76
UPK1A-204ENST00000617999 ZNF831Q5JPB2 1677 aa19.81■□□□□ 0.76
UPK1A-204ENST00000617999 PRIM1P49642 420 aaKnown RBP19.81■□□□□ 0.76
UPK1A-204ENST00000617999 EXOSC9Q06265 439 aaKnown RBP19.81■□□□□ 0.76
UPK1A-204ENST00000617999 PIGBQ92521 554 aa19.81■□□□□ 0.76
UPK1A-204ENST00000617999 SYTL4Q96C24 671 aaPredicted RBP19.81■□□□□ 0.76
UPK1A-204ENST00000617999 KCNQ2O43526 872 aa19.8■□□□□ 0.76
UPK1A-204ENST00000617999 CENPBP07199 599 aaPredicted RBP19.8■□□□□ 0.76
UPK1A-204ENST00000617999 PTF1AQ7RTS3 328 aa19.8■□□□□ 0.76
UPK1A-204ENST00000617999 TSPYL6Q8N831 410 aa19.79■□□□□ 0.76
UPK1A-204ENST00000617999 RGPD3A6NKT7 1758 aaPredicted RBP19.79■□□□□ 0.76
UPK1A-204ENST00000617999 RGPD4Q7Z3J3 1758 aa19.79■□□□□ 0.76
UPK1A-204ENST00000617999 HEG1Q9ULI3 1381 aa19.79■□□□□ 0.76
UPK1A-204ENST00000617999 EP400Q96L91 3159 aa19.79■□□□□ 0.76
UPK1A-204ENST00000617999 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
UPK1A-204ENST00000617999 EIF4A1P60842 406 aaKnown RBP19.78■□□□□ 0.76
UPK1A-204ENST00000617999 ZNF790Q6PG37 636 aa19.78■□□□□ 0.76
UPK1A-204ENST00000617999 C8orf58Q8NAV2 365 aa19.78■□□□□ 0.76
UPK1A-204ENST00000617999 RREB1Q92766 1687 aa19.77■□□□□ 0.76
UPK1A-204ENST00000617999 CACNA1FO60840 1977 aa19.77■□□□□ 0.75
UPK1A-204ENST00000617999 ATG3Q9NT62 314 aa19.76■□□□□ 0.75
UPK1A-204ENST00000617999 ASAP1Q9ULH1 1129 aa19.76■□□□□ 0.75
UPK1A-204ENST00000617999 PALLDQ8WX93 1383 aa19.75■□□□□ 0.75
UPK1A-204ENST00000617999 FAM196AQ6ZSG2 479 aa19.75■□□□□ 0.75
UPK1A-204ENST00000617999 TTC5Q8N0Z6 440 aa19.75■□□□□ 0.75
UPK1A-204ENST00000617999 ZNF496Q96IT1 587 aaPredicted RBP19.75■□□□□ 0.75
UPK1A-204ENST00000617999 TWISTNBQ3B726 338 aaPredicted RBP19.74■□□□□ 0.75
UPK1A-204ENST00000617999 PRAMEF22A3QJZ6 481 aa19.73■□□□□ 0.75
UPK1A-204ENST00000617999 ELL2O00472 640 aaPredicted RBP19.73■□□□□ 0.75
UPK1A-204ENST00000617999 FMNL2Q96PY5 1086 aa19.71■□□□□ 0.75
UPK1A-204ENST00000617999 MYH14Q7Z406 1995 aaKnown RBP19.7■□□□□ 0.74
UPK1A-204ENST00000617999 PTCD1O75127 700 aaKnown RBP19.7■□□□□ 0.74
UPK1A-204ENST00000617999 VAMP4O75379 141 aa19.7■□□□□ 0.74
UPK1A-204ENST00000617999 GIGYF1O75420 1035 aaPredicted RBP19.7■□□□□ 0.74
UPK1A-204ENST00000617999 TRIM37O94972 964 aa19.7■□□□□ 0.74
UPK1A-204ENST00000617999 CT47B1P0C2W7 299 aaPredicted RBP19.7■□□□□ 0.74
UPK1A-204ENST00000617999 SLC4A9Q96Q91 983 aa19.7■□□□□ 0.74
UPK1A-204ENST00000617999 RCAN3Q9UKA8 241 aa19.7■□□□□ 0.74
UPK1A-204ENST00000617999 N4BP2Q86UW6 1770 aaPredicted RBP19.7■□□□□ 0.74
UPK1A-204ENST00000617999 HOXB7P09629 217 aa19.69■□□□□ 0.74
UPK1A-204ENST00000617999 BCL2L13Q9BXK5 485 aa19.69■□□□□ 0.74
UPK1A-204ENST00000617999 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
UPK1A-204ENST00000617999 SOS1Q07889 1333 aaPredicted RBP19.68■□□□□ 0.74
UPK1A-204ENST00000617999 RARSP54136 660 aaKnown RBP19.67■□□□□ 0.74
UPK1A-204ENST00000617999 C4BP0C0L5 1744 aa19.67■□□□□ 0.74
UPK1A-204ENST00000617999 TUBGCP6Q96RT7 1819 aa19.67■□□□□ 0.74
UPK1A-204ENST00000617999 NUP188Q5SRE5 1749 aa19.66■□□□□ 0.74
UPK1A-204ENST00000617999 TCERG1O14776 1098 aaKnown RBP19.66■□□□□ 0.74
UPK1A-204ENST00000617999 HDGFL1Q5TGJ6 251 aa19.66■□□□□ 0.74
UPK1A-204ENST00000617999 SSH1Q8WYL5 1049 aa19.66■□□□□ 0.74
UPK1A-204ENST00000617999 SMARCC1Q92922 1105 aaPredicted RBP19.66■□□□□ 0.74
UPK1A-204ENST00000617999 RBM42Q9BTD8 480 aaKnown RBP19.66■□□□□ 0.74
UPK1A-204ENST00000617999 SNRPA1P09661 255 aaKnown RBP19.65■□□□□ 0.74
UPK1A-204ENST00000617999 DNAJC10Q8IXB1 793 aa19.65■□□□□ 0.74
UPK1A-204ENST00000617999 NECTIN2Q92692 538 aa19.65■□□□□ 0.74
UPK1A-204ENST00000617999 ARFGEF2Q9Y6D5 1785 aa19.65■□□□□ 0.74
UPK1A-204ENST00000617999 LOC102724428A0A0B4J2F2 783 aa19.64■□□□□ 0.73
UPK1A-204ENST00000617999 SIK1P57059 783 aa19.64■□□□□ 0.73
UPK1A-204ENST00000617999 ZNF428Q96B54 188 aa19.64■□□□□ 0.73
UPK1A-204ENST00000617999 SMC4Q9NTJ3 1288 aa19.64■□□□□ 0.73
UPK1A-204ENST00000617999 UBR3Q6ZT12 1888 aa19.63■□□□□ 0.73
UPK1A-204ENST00000617999 C4AP0C0L4 1744 aa19.63■□□□□ 0.73
UPK1A-204ENST00000617999 BCAR3O75815 825 aa19.63■□□□□ 0.73
UPK1A-204ENST00000617999 ITPK1Q13572 414 aa19.63■□□□□ 0.73
UPK1A-204ENST00000617999 VSIG10Q8N0Z9 540 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms