RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 TPM4P67936 248 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
POLR2A-209ENST00000617998 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
POLR2A-209ENST00000617998 PLS1Q14651 629 aa13.15□□□□□ -0.3
POLR2A-209ENST00000617998 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.3
POLR2A-209ENST00000617998 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
POLR2A-209ENST00000617998 MCM10Q7L590 875 aa13.15□□□□□ -0.3
POLR2A-209ENST00000617998 PICK1Q9NRD5 415 aa13.15□□□□□ -0.3
POLR2A-209ENST00000617998 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 C2CD5Q86YS7 1000 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 SULF1Q8IWU6 871 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 MATR3P43243 847 aaKnown RBP eCLIP13.14□□□□□ -0.31
POLR2A-209ENST00000617998 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
POLR2A-209ENST00000617998 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
POLR2A-209ENST00000617998 TRPM2O94759 1503 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 JCADQ9P266 1359 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 GSTO1P78417 241 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
POLR2A-209ENST00000617998 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
POLR2A-209ENST00000617998 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
POLR2A-209ENST00000617998 GNAI2P04899 355 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 NOD1Q9Y239 953 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 CAPN15O75808 1086 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
POLR2A-209ENST00000617998 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.13□□□□□ -0.314e-8■■■■■ 191.5
POLR2A-209ENST00000617998 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 B4DLN1 442 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 KDM4AO75164 1064 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
POLR2A-209ENST00000617998 EN1Q05925 392 aaPredicted RBP13.13□□□□□ -0.31
POLR2A-209ENST00000617998 ABCC5O15440 1437 aa13.13□□□□□ -0.31
POLR2A-209ENST00000617998 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
POLR2A-209ENST00000617998 KRT18P05783 430 aaKnown RBP13.12□□□□□ -0.31
POLR2A-209ENST00000617998 GPATCH8Q9UKJ3 1502 aaKnown RBP13.12□□□□□ -0.31
POLR2A-209ENST00000617998 PPIP5K1Q6PFW1 1433 aa13.12□□□□□ -0.31
POLR2A-209ENST00000617998 CCDC7Q96M83 1385 aa13.12□□□□□ -0.31
POLR2A-209ENST00000617998 LDHAL6AQ6ZMR3 332 aa13.12□□□□□ -0.31
POLR2A-209ENST00000617998 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
POLR2A-209ENST00000617998 CUL5Q93034 780 aa13.12□□□□□ -0.31
POLR2A-209ENST00000617998 DUOX2Q9NRD8 1548 aa13.11□□□□□ -0.31
POLR2A-209ENST00000617998 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
POLR2A-209ENST00000617998 TMEM2Q9UHN6 1383 aa13.11□□□□□ -0.31
POLR2A-209ENST00000617998 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
POLR2A-209ENST00000617998 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
POLR2A-209ENST00000617998 NINLQ9Y2I6 1382 aa13.11□□□□□ -0.31
POLR2A-209ENST00000617998 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
POLR2A-209ENST00000617998 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
POLR2A-209ENST00000617998 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
POLR2A-209ENST00000617998 DBF4Q9UBU7 674 aaPredicted RBP13.11□□□□□ -0.31
POLR2A-209ENST00000617998 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
POLR2A-209ENST00000617998 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
POLR2A-209ENST00000617998 SLC39A6Q13433 755 aa13.1□□□□□ -0.31
POLR2A-209ENST00000617998 CFAP74Q9C0B2 1584 aa13.1□□□□□ -0.31
POLR2A-209ENST00000617998 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
POLR2A-209ENST00000617998 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
POLR2A-209ENST00000617998 EHMT1Q9H9B1 1298 aa13.1□□□□□ -0.31
POLR2A-209ENST00000617998 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 CSADQ9Y600 493 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 LTKP29376 864 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 DUSP27Q5VZP5 1158 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
POLR2A-209ENST00000617998 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
POLR2A-209ENST00000617998 ST18O60284 1047 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 CSPP1Q1MSJ5 1256 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 BRDTQ58F21 947 aaPredicted RBP13.08□□□□□ -0.32
POLR2A-209ENST00000617998 DNAI2Q9GZS0 605 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 HIP1O00291 1037 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 CCDC69A6NI79 296 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 KIAA0556O60303 1618 aa13.08□□□□□ -0.32
POLR2A-209ENST00000617998 PICALMQ13492 652 aa13.07□□□□□ -0.32
POLR2A-209ENST00000617998 LPXNO60711 386 aa13.07□□□□□ -0.32
POLR2A-209ENST00000617998 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
POLR2A-209ENST00000617998 UFL1O94874 794 aa13.07□□□□□ -0.32
POLR2A-209ENST00000617998 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
POLR2A-209ENST00000617998 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
POLR2A-209ENST00000617998 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
POLR2A-209ENST00000617998 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
POLR2A-209ENST00000617998 YY1P25490 414 aa13.06□□□□□ -0.32
POLR2A-209ENST00000617998 ODF2Q5BJF6 829 aa13.06□□□□□ -0.32
POLR2A-209ENST00000617998 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
POLR2A-209ENST00000617998 SRGAP3O43295 1099 aa13.06□□□□□ -0.32
POLR2A-209ENST00000617998 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
POLR2A-209ENST00000617998 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
POLR2A-209ENST00000617998 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
POLR2A-209ENST00000617998 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms