RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
COL4A2-210ENST00000617564 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
COL4A2-210ENST00000617564 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
COL4A2-210ENST00000617564 SPG7Q9UQ90 795 aa16.69■□□□□ 0.26
COL4A2-210ENST00000617564 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
COL4A2-210ENST00000617564 UBR3Q6ZT12 1888 aa16.69■□□□□ 0.26
COL4A2-210ENST00000617564 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
COL4A2-210ENST00000617564 SSFA2P28290 1259 aa16.68■□□□□ 0.26
COL4A2-210ENST00000617564 PIGBQ92521 554 aa16.68■□□□□ 0.26
COL4A2-210ENST00000617564 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
COL4A2-210ENST00000617564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL4A2-210ENST00000617564 ARHGAP27Q6ZUM4 889 aa16.67■□□□□ 0.26
COL4A2-210ENST00000617564 MAP2P11137 1827 aaKnown RBP16.67■□□□□ 0.26
COL4A2-210ENST00000617564 WASHC2AQ641Q2 1341 aa16.67■□□□□ 0.26
COL4A2-210ENST00000617564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
COL4A2-210ENST00000617564 BCS1LQ9Y276 419 aa16.66■□□□□ 0.26
COL4A2-210ENST00000617564 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
COL4A2-210ENST00000617564 C10orf71Q711Q0 1435 aa16.65■□□□□ 0.26
COL4A2-210ENST00000617564 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
COL4A2-210ENST00000617564 SIK1P57059 783 aa16.65■□□□□ 0.26
COL4A2-210ENST00000617564 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
COL4A2-210ENST00000617564 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
COL4A2-210ENST00000617564 PHF14O94880 888 aa16.64■□□□□ 0.25
COL4A2-210ENST00000617564 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
COL4A2-210ENST00000617564 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.25
COL4A2-210ENST00000617564 PPM1GO15355 546 aaPredicted RBP16.63■□□□□ 0.25
COL4A2-210ENST00000617564 C9orf131Q5VYM1 1079 aa16.63■□□□□ 0.25
COL4A2-210ENST00000617564 EYA1Q99502 592 aa16.63■□□□□ 0.25
COL4A2-210ENST00000617564 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
COL4A2-210ENST00000617564 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
COL4A2-210ENST00000617564 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
COL4A2-210ENST00000617564 PHKG2P15735 406 aa16.61■□□□□ 0.25
COL4A2-210ENST00000617564 PRDM10Q9NQV6 1147 aa16.61■□□□□ 0.25
COL4A2-210ENST00000617564 ZNF831Q5JPB2 1677 aa16.6■□□□□ 0.25
COL4A2-210ENST00000617564 POLKQ9UBT6 870 aa16.6■□□□□ 0.25
COL4A2-210ENST00000617564 TIMELESSQ9UNS1 1208 aa16.6■□□□□ 0.25
COL4A2-210ENST00000617564 KDRP35968 1356 aa16.6■□□□□ 0.25
COL4A2-210ENST00000617564 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
COL4A2-210ENST00000617564 GNPATO15228 680 aa16.59■□□□□ 0.25
COL4A2-210ENST00000617564 ITPK1Q13572 414 aa16.59■□□□□ 0.25
COL4A2-210ENST00000617564 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
COL4A2-210ENST00000617564 FOXN1O15353 648 aa16.58■□□□□ 0.24
COL4A2-210ENST00000617564 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
COL4A2-210ENST00000617564 TGFB2P61812 414 aa16.58■□□□□ 0.24
COL4A2-210ENST00000617564 MLLT1Q03111 559 aaPredicted RBP16.58■□□□□ 0.24
COL4A2-210ENST00000617564 ATG3Q9NT62 314 aa16.58■□□□□ 0.24
COL4A2-210ENST00000617564 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
COL4A2-210ENST00000617564 A0A0G2JLW4 131 aa16.57■□□□□ 0.24
COL4A2-210ENST00000617564 FCHSD2O94868 740 aa16.57■□□□□ 0.24
COL4A2-210ENST00000617564 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
COL4A2-210ENST00000617564 SMIM5Q71RC9 77 aa16.57■□□□□ 0.24
COL4A2-210ENST00000617564 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
COL4A2-210ENST00000617564 HSP90AB1P08238 724 aaKnown RBP16.56■□□□□ 0.24
COL4A2-210ENST00000617564 MMP10P09238 476 aa16.56■□□□□ 0.24
COL4A2-210ENST00000617564 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
COL4A2-210ENST00000617564 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
COL4A2-210ENST00000617564 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
COL4A2-210ENST00000617564 RTCBQ9Y3I0 505 aaKnown RBP16.55■□□□□ 0.24
COL4A2-210ENST00000617564 ABHD8Q96I13 439 aa16.54■□□□□ 0.24
COL4A2-210ENST00000617564 CNTNAP4Q9C0A0 1308 aa16.53■□□□□ 0.24
COL4A2-210ENST00000617564 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
COL4A2-210ENST00000617564 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
COL4A2-210ENST00000617564 NLGN1Q8N2Q7 840 aa16.53■□□□□ 0.24
COL4A2-210ENST00000617564 DCAF5Q96JK2 942 aa16.53■□□□□ 0.24
COL4A2-210ENST00000617564 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
COL4A2-210ENST00000617564 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
COL4A2-210ENST00000617564 TRAPPC3LQ5T215 181 aa16.52■□□□□ 0.24
COL4A2-210ENST00000617564 MKRN1Q9UHC7 482 aaKnown RBP16.52■□□□□ 0.24
COL4A2-210ENST00000617564 DPEP1P16444 411 aa16.51■□□□□ 0.23
COL4A2-210ENST00000617564 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
COL4A2-210ENST00000617564 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
COL4A2-210ENST00000617564 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
COL4A2-210ENST00000617564 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
COL4A2-210ENST00000617564 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
COL4A2-210ENST00000617564 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
COL4A2-210ENST00000617564 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
COL4A2-210ENST00000617564 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
COL4A2-210ENST00000617564 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
COL4A2-210ENST00000617564 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-210ENST00000617564 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-210ENST00000617564 ZNF530Q6P9A1 599 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-210ENST00000617564 ARHGEF1Q92888 912 aaKnown RBP16.49■□□□□ 0.23
COL4A2-210ENST00000617564 ARFGEF1Q9Y6D6 1849 aa16.48■□□□□ 0.23
COL4A2-210ENST00000617564 GYS1P13807 737 aa16.48■□□□□ 0.23
COL4A2-210ENST00000617564 RGS19P49795 217 aa16.48■□□□□ 0.23
COL4A2-210ENST00000617564 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
COL4A2-210ENST00000617564 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
COL4A2-210ENST00000617564 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
COL4A2-210ENST00000617564 RFC4P35249 363 aa16.47■□□□□ 0.23
COL4A2-210ENST00000617564 CABP4P57796 275 aa16.47■□□□□ 0.23
COL4A2-210ENST00000617564 CCDC85CA6NKD9 419 aa16.46■□□□□ 0.23
COL4A2-210ENST00000617564 LBX1P52954 281 aa16.46■□□□□ 0.23
COL4A2-210ENST00000617564 C1orf141Q5JVX7 400 aa16.46■□□□□ 0.23
COL4A2-210ENST00000617564 PARP3Q9Y6F1 533 aa16.46■□□□□ 0.23
COL4A2-210ENST00000617564 PIM2Q9P1W9 311 aa16.45■□□□□ 0.22
COL4A2-210ENST00000617564 MTHFSP49914 203 aa16.44■□□□□ 0.22
COL4A2-210ENST00000617564 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL4A2-210ENST00000617564 PANK3Q9H999 370 aa16.44■□□□□ 0.22
COL4A2-210ENST00000617564 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
COL4A2-210ENST00000617564 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms