RNA–Protein interactions for RNA: ENST00000617408.1

PCDHA11-203, Transcript of protocadherin alpha 11, humanhuman

TSL 3

Gene PCDHA11, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-203ENST00000617408 U2AF1Q01081 240 aaKnown RBP eCLIP28.1■■■□□ 2.09
PCDHA11-203ENST00000617408 AK7Q96M32 723 aa28.1■■■□□ 2.09
PCDHA11-203ENST00000617408 MRC1P22897 1456 aa28.09■■■□□ 2.09
PCDHA11-203ENST00000617408 PRKAR2BP31323 418 aa28.09■■■□□ 2.09
PCDHA11-203ENST00000617408 ATP6V1AP38606 617 aa28.09■■■□□ 2.09
PCDHA11-203ENST00000617408 RBM42Q9BTD8 480 aaKnown RBP28.09■■■□□ 2.09
PCDHA11-203ENST00000617408 ADAMTS7Q9UKP4 1686 aa28.08■■■□□ 2.09
PCDHA11-203ENST00000617408 MSH5O43196 834 aa28.08■■■□□ 2.09
PCDHA11-203ENST00000617408 PTGER2P43116 358 aa28.08■■■□□ 2.09
PCDHA11-203ENST00000617408 NFATC2IPQ8NCF5 419 aa28.08■■■□□ 2.09
PCDHA11-203ENST00000617408 LINC00116Q8NCU8 138 aa28.07■■■□□ 2.08
PCDHA11-203ENST00000617408 GAS2L2Q8NHY3 880 aa28.07■■■□□ 2.08
PCDHA11-203ENST00000617408 RSPH6AQ9H0K4 717 aa28.07■■■□□ 2.08
PCDHA11-203ENST00000617408 LGR6Q9HBX8 967 aa28.07■■■□□ 2.08
PCDHA11-203ENST00000617408 ZNF831Q5JPB2 1677 aa28.07■■■□□ 2.08
PCDHA11-203ENST00000617408 UBR3Q6ZT12 1888 aa28.06■■■□□ 2.08
PCDHA11-203ENST00000617408 RNMTO43148 476 aaKnown RBP28.06■■■□□ 2.08
PCDHA11-203ENST00000617408 MAP3K5Q99683 1374 aa28.06■■■□□ 2.08
PCDHA11-203ENST00000617408 ITPK1Q13572 414 aa28.05■■■□□ 2.08
PCDHA11-203ENST00000617408 SLC52A2Q9HAB3 445 aa28.05■■■□□ 2.08
PCDHA11-203ENST00000617408 RALBP1Q15311 655 aa28.04■■■□□ 2.08
PCDHA11-203ENST00000617408 SLC16A10Q8TF71 515 aa28.04■■■□□ 2.08
PCDHA11-203ENST00000617408 COL23A1Q86Y22 540 aaPredicted RBP28.03■■■□□ 2.08
PCDHA11-203ENST00000617408 COL5A3P25940 1745 aaPredicted RBP28.03■■■□□ 2.08
PCDHA11-203ENST00000617408 PTCD1O75127 700 aaKnown RBP28.02■■■□□ 2.08
PCDHA11-203ENST00000617408 PHF14O94880 888 aa28.02■■■□□ 2.08
PCDHA11-203ENST00000617408 PHACTR3Q96KR7 559 aa28.01■■■□□ 2.07
PCDHA11-203ENST00000617408 SGIP1Q9BQI5 828 aa28.01■■■□□ 2.07
PCDHA11-203ENST00000617408 COL24A1Q17RW2 1714 aa28.01■■■□□ 2.07
PCDHA11-203ENST00000617408 GNAT3A8MTJ3 354 aa28■■■□□ 2.07
PCDHA11-203ENST00000617408 SLC4A9Q96Q91 983 aa28■■■□□ 2.07
PCDHA11-203ENST00000617408 TJP1Q07157 1748 aa27.99■■■□□ 2.07
PCDHA11-203ENST00000617408 GNPATO15228 680 aa27.99■■■□□ 2.07
PCDHA11-203ENST00000617408 FCHSD2O94868 740 aa27.99■■■□□ 2.07
PCDHA11-203ENST00000617408 FLAD1Q8NFF5 587 aa27.99■■■□□ 2.07
PCDHA11-203ENST00000617408 POLD1P28340 1107 aa27.98■■■□□ 2.07
PCDHA11-203ENST00000617408 AMIGO3Q86WK7 504 aa27.98■■■□□ 2.07
PCDHA11-203ENST00000617408 CICQ96RK0 1608 aaPredicted RBP27.97■■■□□ 2.07
PCDHA11-203ENST00000617408 SMIM5Q71RC9 77 aa27.97■■■□□ 2.07
PCDHA11-203ENST00000617408 ARXQ96QS3 562 aa27.97■■■□□ 2.07
PCDHA11-203ENST00000617408 MYBBP1AQ9BQG0 1328 aaKnown RBP27.96■■■□□ 2.07
PCDHA11-203ENST00000617408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.96■■■□□ 2.07
PCDHA11-203ENST00000617408 MSL1Q68DK7 614 aa27.96■■■□□ 2.07
PCDHA11-203ENST00000617408 SSFA2P28290 1259 aa27.95■■■□□ 2.06
PCDHA11-203ENST00000617408 TEFQ10587 303 aa27.95■■■□□ 2.06
PCDHA11-203ENST00000617408 SLC39A6Q13433 755 aa27.95■■■□□ 2.06
PCDHA11-203ENST00000617408 SIPA1L3O60292 1781 aaPredicted RBP27.95■■■□□ 2.06
PCDHA11-203ENST00000617408 FHDC1Q9C0D6 1143 aaPredicted RBP27.94■■■□□ 2.06
PCDHA11-203ENST00000617408 KCPQ6ZWJ8 1503 aa27.93■■■□□ 2.06
PCDHA11-203ENST00000617408 NEFMP07197 916 aa27.93■■■□□ 2.06
PCDHA11-203ENST00000617408 IL17REQ8NFR9 667 aa27.93■■■□□ 2.06
PCDHA11-203ENST00000617408 UBR2Q8IWV8 1755 aa27.93■■■□□ 2.06
PCDHA11-203ENST00000617408 CNTNAP4Q9C0A0 1308 aa27.92■■■□□ 2.06
PCDHA11-203ENST00000617408 KLHL34Q8N239 644 aa27.91■■■□□ 2.06
PCDHA11-203ENST00000617408 CEMIPQ8WUJ3 1361 aa27.9■■■□□ 2.06
PCDHA11-203ENST00000617408 RTF1Q92541 710 aaKnown RBP27.9■■■□□ 2.06
PCDHA11-203ENST00000617408 RTCBQ9Y3I0 505 aaKnown RBP27.9■■■□□ 2.06
PCDHA11-203ENST00000617408 TTC5Q8N0Z6 440 aa27.89■■■□□ 2.06
PCDHA11-203ENST00000617408 MYH14Q7Z406 1995 aaKnown RBP27.88■■■□□ 2.05
PCDHA11-203ENST00000617408 CRKLP46109 303 aaKnown RBP27.88■■■□□ 2.05
PCDHA11-203ENST00000617408 C4AP0C0L4 1744 aa27.87■■■□□ 2.05
PCDHA11-203ENST00000617408 RC3H1Q5TC82 1133 aaKnown RBP27.87■■■□□ 2.05
PCDHA11-203ENST00000617408 SYT17Q9BSW7 474 aa27.87■■■□□ 2.05
PCDHA11-203ENST00000617408 DLG5Q8TDM6 1919 aa27.86■■■□□ 2.05
PCDHA11-203ENST00000617408 MCM10Q7L590 875 aa27.86■■■□□ 2.05
PCDHA11-203ENST00000617408 DNAJC10Q8IXB1 793 aa27.86■■■□□ 2.05
PCDHA11-203ENST00000617408 MAPK8IP3Q9UPT6 1336 aa27.86■■■□□ 2.05
PCDHA11-203ENST00000617408 TRAPPC3LQ5T215 181 aa27.84■■■□□ 2.05
PCDHA11-203ENST00000617408 PLEKHF1Q96S99 279 aa27.84■■■□□ 2.05
PCDHA11-203ENST00000617408 PNNQ9H307 717 aaKnown RBP27.84■■■□□ 2.05
PCDHA11-203ENST00000617408 PRKRIP1Q9H875 184 aaPredicted RBP27.84■■■□□ 2.05
PCDHA11-203ENST00000617408 RPS6KA4O75676 772 aa27.83■■■□□ 2.05
PCDHA11-203ENST00000617408 ADRA2BP18089 450 aa27.82■■■□□ 2.04
PCDHA11-203ENST00000617408 DCTN1Q14203 1278 aa27.82■■■□□ 2.04
PCDHA11-203ENST00000617408 ZNF790Q6PG37 636 aa27.82■■■□□ 2.04
PCDHA11-203ENST00000617408 ZNF316A6NFI3 1004 aaPredicted RBP27.81■■■□□ 2.04
PCDHA11-203ENST00000617408 DCAF8L1A6NGE4 600 aa27.81■■■□□ 2.04
PCDHA11-203ENST00000617408 BTBD11A6QL63 1104 aa27.81■■■□□ 2.04
PCDHA11-203ENST00000617408 VSIG10Q8N0Z9 540 aa27.8■■■□□ 2.04
PCDHA11-203ENST00000617408 ARHGEF1Q92888 912 aaKnown RBP27.8■■■□□ 2.04
PCDHA11-203ENST00000617408 CCDC87Q9NVE4 849 aa27.8■■■□□ 2.04
PCDHA11-203ENST00000617408 HTATSF1O43719 755 aaKnown RBP27.79■■■□□ 2.04
PCDHA11-203ENST00000617408 RFC4P35249 363 aa27.79■■■□□ 2.04
PCDHA11-203ENST00000617408 ZNF496Q96IT1 587 aaPredicted RBP27.79■■■□□ 2.04
PCDHA11-203ENST00000617408 HEG1Q9ULI3 1381 aa27.78■■■□□ 2.04
PCDHA11-203ENST00000617408 CYP19A1P11511 503 aaPredicted RBP27.78■■■□□ 2.04
PCDHA11-203ENST00000617408 NFE2L2Q16236 605 aa27.78■■■□□ 2.04
PCDHA11-203ENST00000617408 INTS5Q6P9B9 1019 aaKnown RBP27.78■■■□□ 2.04
PCDHA11-203ENST00000617408 WDR43Q15061 677 aaKnown RBP eCLIP27.77■■■□□ 2.04
PCDHA11-203ENST00000617408 FMNL2Q96PY5 1086 aa27.76■■■□□ 2.03
PCDHA11-203ENST00000617408 KCNQ3O43525 872 aa27.75■■■□□ 2.03
PCDHA11-203ENST00000617408 ZBTB1Q9Y2K1 713 aa27.75■■■□□ 2.03
PCDHA11-203ENST00000617408 NLGN2Q8NFZ4 835 aa27.74■■■□□ 2.03
PCDHA11-203ENST00000617408 SOS1Q07889 1333 aaPredicted RBP27.73■■■□□ 2.03
PCDHA11-203ENST00000617408 COL15A1P39059 1388 aa27.73■■■□□ 2.03
PCDHA11-203ENST00000617408 STARD3NLO95772 234 aa27.72■■■□□ 2.03
PCDHA11-203ENST00000617408 MMP10P09238 476 aa27.72■■■□□ 2.03
PCDHA11-203ENST00000617408 GYS1P13807 737 aa27.72■■■□□ 2.03
PCDHA11-203ENST00000617408 CCDC146Q8IYE0 955 aa27.72■■■□□ 2.03
PCDHA11-203ENST00000617408 SRP68Q9UHB9 627 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 460.9 ms