RNA–Protein interactions for RNA: ENST00000617133.4

SEM1-217, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-217ENST00000617133 CLN3Q13286 438 aa8.69□□□□□ -1.02
SEM1-217ENST00000617133 LAPTM4AQ15012 233 aa8.69□□□□□ -1.02
SEM1-217ENST00000617133 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
SEM1-217ENST00000617133 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
SEM1-217ENST00000617133 CNKSR1Q969H4 720 aa8.69□□□□□ -1.02
SEM1-217ENST00000617133 ESYT1Q9BSJ8 1104 aa8.69□□□□□ -1.02
SEM1-217ENST00000617133 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
SEM1-217ENST00000617133 MEN1O00255 615 aa8.68□□□□□ -1.02
SEM1-217ENST00000617133 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
SEM1-217ENST00000617133 CTC1Q2NKJ3 1217 aa8.68□□□□□ -1.02
SEM1-217ENST00000617133 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
SEM1-217ENST00000617133 HINFPQ9BQA5 517 aa8.68□□□□□ -1.02
SEM1-217ENST00000617133 TSEN34Q9BSV6 310 aaKnown RBP8.68□□□□□ -1.02
SEM1-217ENST00000617133 EPHA4P54764 986 aa8.67□□□□□ -1.02
SEM1-217ENST00000617133 TNS4Q8IZW8 715 aa8.67□□□□□ -1.02
SEM1-217ENST00000617133 SPINT1O43278 529 aa8.66□□□□□ -1.02
SEM1-217ENST00000617133 UPP2O95045 317 aa8.66□□□□□ -1.02
SEM1-217ENST00000617133 BMP1P13497 986 aa8.66□□□□□ -1.02
SEM1-217ENST00000617133 SMTNP53814 917 aa8.66□□□□□ -1.02
SEM1-217ENST00000617133 TLR1Q15399 786 aa8.66□□□□□ -1.02
SEM1-217ENST00000617133 MRPL14Q6P1L8 145 aaKnown RBP8.66□□□□□ -1.02
SEM1-217ENST00000617133 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
SEM1-217ENST00000617133 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
SEM1-217ENST00000617133 INSM2Q96T92 566 aaPredicted RBP8.66□□□□□ -1.02
SEM1-217ENST00000617133 IRX2Q9BZI1 471 aaPredicted RBP8.66□□□□□ -1.02
SEM1-217ENST00000617133 A6NJY4 79 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 AXIN1O15169 862 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 PRMT3O60678 531 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 CENPCQ03188 943 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 MTFR1Q15390 333 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 C6orf118Q5T5N4 469 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 PRIMPOLQ96LW4 560 aa8.65□□□□□ -1.02
SEM1-217ENST00000617133 FHDC1Q9C0D6 1143 aaPredicted RBP8.65□□□□□ -1.02
SEM1-217ENST00000617133 ST8SIA5O15466 376 aa8.64□□□□□ -1.03
SEM1-217ENST00000617133 BMP2P12643 396 aa8.64□□□□□ -1.03
SEM1-217ENST00000617133 ATP2B4P23634 1241 aa8.64□□□□□ -1.03
SEM1-217ENST00000617133 FOXK2Q01167 660 aa8.64□□□□□ -1.03
SEM1-217ENST00000617133 OCLNQ16625 522 aa8.64□□□□□ -1.03
SEM1-217ENST00000617133 SCHIP1Q9P0W5 487 aaPredicted RBP8.64□□□□□ -1.03
SEM1-217ENST00000617133 BRD1O95696 1058 aa8.63□□□□□ -1.03
SEM1-217ENST00000617133 WEE1P30291 646 aa8.63□□□□□ -1.03
SEM1-217ENST00000617133 CTSOP43234 321 aaPredicted RBP8.63□□□□□ -1.03
SEM1-217ENST00000617133 FOXD4L5Q5VV16 416 aaPredicted RBP8.63□□□□□ -1.03
SEM1-217ENST00000617133 PHLDB3Q6NSJ2 640 aa8.63□□□□□ -1.03
SEM1-217ENST00000617133 PURBQ96QR8 312 aaKnown RBP8.63□□□□□ -1.03
SEM1-217ENST00000617133 TSPAN10Q9H1Z9 355 aaPredicted RBP8.63□□□□□ -1.03
SEM1-217ENST00000617133 POLMQ9NP87 494 aaPredicted RBP8.63□□□□□ -1.03
SEM1-217ENST00000617133 USP3Q9Y6I4 520 aa8.63□□□□□ -1.03
SEM1-217ENST00000617133 SSFA2P28290 1259 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 GPC1P35052 558 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 RNF144AP50876 292 aaPredicted RBP8.62□□□□□ -1.03
SEM1-217ENST00000617133 SCARF1Q14162 830 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 TBCELQ5QJ74 424 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 B4GALNT3Q6L9W6 998 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 SLC9A9Q8IVB4 645 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 AAASQ9NRG9 546 aa8.62□□□□□ -1.03
SEM1-217ENST00000617133 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
SEM1-217ENST00000617133 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
SEM1-217ENST00000617133 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
SEM1-217ENST00000617133 C21orf2O43822 256 aa8.61□□□□□ -1.03
SEM1-217ENST00000617133 SCG3Q8WXD2 468 aaKnown RBP8.61□□□□□ -1.03
SEM1-217ENST00000617133 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
SEM1-217ENST00000617133 IGFBP4P22692 258 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 SLC27A3Q5K4L6 730 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 AEBP1Q8IUX7 1158 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 DACH1Q9UI36 760 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
SEM1-217ENST00000617133 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.03
SEM1-217ENST00000617133 PPARGC1BQ86YN6 1023 aaKnown RBP8.59□□□□□ -1.03
SEM1-217ENST00000617133 ZNF295-AS1Q8N0V1 137 aa8.59□□□□□ -1.03
SEM1-217ENST00000617133 NBPF15Q8N660 670 aa8.59□□□□□ -1.03
SEM1-217ENST00000617133 RNF217Q8TC41 542 aa8.59□□□□□ -1.03
SEM1-217ENST00000617133 ATP13A2Q9NQ11 1180 aa8.59□□□□□ -1.03
SEM1-217ENST00000617133 SOS2Q07890 1332 aaPredicted RBP8.58□□□□□ -1.04
SEM1-217ENST00000617133 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
SEM1-217ENST00000617133 PPP1R12BO60237 982 aaPredicted RBP8.58□□□□□ -1.04
SEM1-217ENST00000617133 SCNN1AP37088 669 aa8.58□□□□□ -1.04
SEM1-217ENST00000617133 TMEM214Q6NUQ4 689 aaKnown RBP8.58□□□□□ -1.04
SEM1-217ENST00000617133 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
SEM1-217ENST00000617133 FOXO3O43524 673 aa8.57□□□□□ -1.04
SEM1-217ENST00000617133 GTF2E1P29083 439 aaPredicted RBP8.57□□□□□ -1.04
SEM1-217ENST00000617133 PSMA6P60900 246 aaKnown RBP8.57□□□□□ -1.04
SEM1-217ENST00000617133 KCNA1Q09470 495 aa8.57□□□□□ -1.04
SEM1-217ENST00000617133 TAS1R3Q7RTX0 852 aa8.57□□□□□ -1.04
SEM1-217ENST00000617133 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
SEM1-217ENST00000617133 ABCC9O60706 1549 aa8.56□□□□□ -1.04
SEM1-217ENST00000617133 STAG2Q8N3U4 1231 aa8.56□□□□□ -1.04
SEM1-217ENST00000617133 RHBDD1Q8TEB9 315 aa8.56□□□□□ -1.04
SEM1-217ENST00000617133 ZDHHC1Q8WTX9 485 aa8.56□□□□□ -1.04
SEM1-217ENST00000617133 MKNK1Q9BUB5 465 aa8.56□□□□□ -1.04
SEM1-217ENST00000617133 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
SEM1-217ENST00000617133 CABP1Q9NZU7 370 aa8.56□□□□□ -1.04
SEM1-217ENST00000617133 FIGNL2A6NMB9 653 aa8.55□□□□□ -1.04
SEM1-217ENST00000617133 SPATA31C2B4DYI2 1134 aa8.55□□□□□ -1.04
SEM1-217ENST00000617133 TRIM26Q12899 539 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms