RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
PCDH9-206ENST00000617020 TRPM3Q9HCF6 1732 aaPredicted RBP9.5□□□□□ -0.89
PCDH9-206ENST00000617020 ANKRD50Q9ULJ7 1429 aa9.49□□□□□ -0.89
PCDH9-206ENST00000617020 ALS2Q96Q42 1657 aa9.49□□□□□ -0.89
PCDH9-206ENST00000617020 PDIA6Q15084 440 aa9.49□□□□□ -0.89
PCDH9-206ENST00000617020 ZNF326Q5BKZ1 582 aaKnown RBP9.49□□□□□ -0.89
PCDH9-206ENST00000617020 KRT28Q7Z3Y7 464 aa9.49□□□□□ -0.89
PCDH9-206ENST00000617020 CDCA7LQ96GN5 454 aa9.49□□□□□ -0.89
PCDH9-206ENST00000617020 CLTCL1P53675 1640 aa9.49□□□□□ -0.89
PCDH9-206ENST00000617020 PEAK1Q9H792 1746 aa9.48□□□□□ -0.89
PCDH9-206ENST00000617020 PRELPP51888 382 aa9.48□□□□□ -0.89
PCDH9-206ENST00000617020 PRSS12P56730 875 aa9.48□□□□□ -0.89
PCDH9-206ENST00000617020 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.48□□□□□ -0.89
PCDH9-206ENST00000617020 PARP4Q9UKK3 1724 aaKnown RBP9.48□□□□□ -0.89
PCDH9-206ENST00000617020 C3orf80F5H4A9 247 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 GPR162Q16538 588 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 COL13A1Q5TAT6 717 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-206ENST00000617020 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 KNDC1Q76NI1 1749 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 PCNTO95613 3336 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 ARHGEF10O15013 1369 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 MAP3K5Q99683 1374 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 ATP10DQ9P241 1426 aa9.47□□□□□ -0.89
PCDH9-206ENST00000617020 PPLO60437 1756 aa9.46□□□□□ -0.9
PCDH9-206ENST00000617020 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
PCDH9-206ENST00000617020 SPATA31A1Q5TZJ5 1347 aa9.46□□□□□ -0.9
PCDH9-206ENST00000617020 TECPR2O15040 1411 aa9.46□□□□□ -0.9
PCDH9-206ENST00000617020 NBPF26B4DH59 902 aa9.45□□□□□ -0.9
PCDH9-206ENST00000617020 TATDN2Q93075 761 aa9.45□□□□□ -0.9
PCDH9-206ENST00000617020 SBNO1A3KN83 1393 aa9.45□□□□□ -0.9
PCDH9-206ENST00000617020 WDR90Q96KV7 1748 aa9.45□□□□□ -0.9
PCDH9-206ENST00000617020 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
PCDH9-206ENST00000617020 APLP1P51693 650 aa9.44□□□□□ -0.9
PCDH9-206ENST00000617020 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
PCDH9-206ENST00000617020 ZNF787Q6DD87 383 aa9.44□□□□□ -0.9
PCDH9-206ENST00000617020 PDZRN3Q9UPQ7 1066 aa9.44□□□□□ -0.9
PCDH9-206ENST00000617020 NRXN1Q9ULB1 1477 aa9.44□□□□□ -0.9
PCDH9-206ENST00000617020 PHRF1Q9P1Y6 1649 aaKnown RBP9.44□□□□□ -0.9
PCDH9-206ENST00000617020 TOPAZ1Q8N9V7 1692 aa9.44□□□□□ -0.9
PCDH9-206ENST00000617020 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
PCDH9-206ENST00000617020 TNS4Q8IZW8 715 aa9.43□□□□□ -0.9
PCDH9-206ENST00000617020 PNMA3Q9UL41 463 aa9.43□□□□□ -0.9
PCDH9-206ENST00000617020 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
PCDH9-206ENST00000617020 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
PCDH9-206ENST00000617020 PSME1Q06323 249 aa9.42□□□□□ -0.9
PCDH9-206ENST00000617020 PDE3BQ13370 1112 aa9.42□□□□□ -0.9
PCDH9-206ENST00000617020 ARXQ96QS3 562 aa9.42□□□□□ -0.9
PCDH9-206ENST00000617020 MTFR1LQ9H019 292 aa9.42□□□□□ -0.9
PCDH9-206ENST00000617020 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
PCDH9-206ENST00000617020 WNK3Q9BYP7 1800 aa9.41□□□□□ -0.9
PCDH9-206ENST00000617020 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
PCDH9-206ENST00000617020 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-206ENST00000617020 USP35Q9P2H5 1018 aa9.4□□□□□ -0.9
PCDH9-206ENST00000617020 PLEKHH1Q9ULM0 1364 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 PAPPAQ13219 1627 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 PLSCR1O15162 318 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 RNF40O75150 1001 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 STRN4Q9NRL3 753 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 OVOS2A0A0G2JMS6 1433 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 OVOS2A0A0J9YW53 1432 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 OVOS2Q6IE36 1432 aa9.39□□□□□ -0.91
PCDH9-206ENST00000617020 ADCY9O60503 1353 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 GGCXP38435 758 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 WAPLQ7Z5K2 1190 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 DNAJC5GQ8N7S2 189 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
PCDH9-206ENST00000617020 PRDM11Q9NQV5 511 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 STK32BQ9NY57 414 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 RBM27Q9P2N5 1060 aaKnown RBP9.38□□□□□ -0.91
PCDH9-206ENST00000617020 QSER1Q2KHR3 1735 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 TUBGCP6Q96RT7 1819 aa9.38□□□□□ -0.91
PCDH9-206ENST00000617020 ATP7BP35670 1465 aa9.37□□□□□ -0.91
PCDH9-206ENST00000617020 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
PCDH9-206ENST00000617020 NUDT18Q6ZVK8 323 aa9.37□□□□□ -0.91
PCDH9-206ENST00000617020 ZNF526Q8TF50 670 aaPredicted RBP9.37□□□□□ -0.91
PCDH9-206ENST00000617020 CDHR5Q9HBB8 845 aa9.37□□□□□ -0.91
PCDH9-206ENST00000617020 SSH2Q76I76 1423 aa9.37□□□□□ -0.91
PCDH9-206ENST00000617020 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 YBX3P16989 372 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCDH9-206ENST00000617020 SLC15A2Q16348 729 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 PTF1AQ7RTS3 328 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 TMUB1Q9BVT8 246 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 ARHGEF28Q8N1W1 1705 aaKnown RBP9.36□□□□□ -0.91
PCDH9-206ENST00000617020 NUP155O75694 1391 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 KIAA0232Q92628 1395 aa9.36□□□□□ -0.91
PCDH9-206ENST00000617020 COPS2P61201 443 aa9.35□□□□□ -0.91
PCDH9-206ENST00000617020 CHRNA2Q15822 529 aa9.34□□□□□ -0.91
PCDH9-206ENST00000617020 TRIM67Q6ZTA4 783 aa9.34□□□□□ -0.91
PCDH9-206ENST00000617020 NLGN2Q8NFZ4 835 aa9.34□□□□□ -0.91
PCDH9-206ENST00000617020 STK26Q9P289 416 aa9.34□□□□□ -0.91
PCDH9-206ENST00000617020 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
PCDH9-206ENST00000617020 TTC13Q8NBP0 860 aa9.33□□□□□ -0.92
PCDH9-206ENST00000617020 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-206ENST00000617020 C11orf95C9JLR9 678 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-206ENST00000617020 GRIN3BO60391 1043 aa9.32□□□□□ -0.92
PCDH9-206ENST00000617020 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
PCDH9-206ENST00000617020 SWT1Q5T5J6 900 aaKnown RBP9.32□□□□□ -0.92
PCDH9-206ENST00000617020 SLF2Q8IX21 1173 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms