RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 RAPGEF4Q8WZA2 1011 aa15.42■□□□□ 0.06
TULP4-206ENST00000616856 FAM208AQ9UK61 1670 aaKnown RBP15.42■□□□□ 0.06
TULP4-206ENST00000616856 CHL1O00533 1208 aa15.42■□□□□ 0.06
TULP4-206ENST00000616856 AMOTQ4VCS5 1084 aa15.42■□□□□ 0.06
TULP4-206ENST00000616856 ARHGAP45Q92619 1136 aa15.42■□□□□ 0.06
TULP4-206ENST00000616856 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
TULP4-206ENST00000616856 STRN4Q9NRL3 753 aa15.42■□□□□ 0.06
TULP4-206ENST00000616856 COL5A2P05997 1499 aaPredicted RBP15.41■□□□□ 0.06
TULP4-206ENST00000616856 TOM1L2Q6ZVM7 507 aa15.4■□□□□ 0.06
TULP4-206ENST00000616856 LNPKQ9C0E8 428 aa15.4■□□□□ 0.06
TULP4-206ENST00000616856 ABCC4O15439 1325 aa15.4■□□□□ 0.06
TULP4-206ENST00000616856 TSPYL4Q9UJ04 414 aa15.4■□□□□ 0.06
TULP4-206ENST00000616856 WDR17Q8IZU2 1322 aa15.4■□□□□ 0.06
TULP4-206ENST00000616856 MEGF6O75095 1541 aa15.4■□□□□ 0.06
TULP4-206ENST00000616856 COL16A1Q07092 1604 aaPredicted RBP15.4■□□□□ 0.06
TULP4-206ENST00000616856 TATP17735 454 aaPredicted RBP15.39■□□□□ 0.05
TULP4-206ENST00000616856 AKAP4Q5JQC9 854 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 C1orf141Q5JVX7 400 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 SIRT2Q8IXJ6 389 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 LRRC37A3O60309 1634 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 EVA1CP58658 441 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 NUCB1Q02818 461 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 MPRIPQ6WCQ1 1025 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 LGR6Q9HBX8 967 aa15.39■□□□□ 0.05
TULP4-206ENST00000616856 COL22A1Q8NFW1 1626 aaPredicted RBP15.37■□□□□ 0.05
TULP4-206ENST00000616856 GSE1Q14687 1217 aa15.37■□□□□ 0.05
TULP4-206ENST00000616856 LARP1Q6PKG0 1096 aaKnown RBP15.37■□□□□ 0.05
TULP4-206ENST00000616856 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
TULP4-206ENST00000616856 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
TULP4-206ENST00000616856 FRAT2O75474 233 aaPredicted RBP15.36■□□□□ 0.05
TULP4-206ENST00000616856 CEMIPQ8WUJ3 1361 aa15.36■□□□□ 0.05
TULP4-206ENST00000616856 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
TULP4-206ENST00000616856 TAF7Q15545 349 aaPredicted RBP15.35■□□□□ 0.05
TULP4-206ENST00000616856 CHD1LQ86WJ1 897 aa15.35■□□□□ 0.05
TULP4-206ENST00000616856 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
TULP4-206ENST00000616856 SPG7Q9UQ90 795 aa15.35■□□□□ 0.05
TULP4-206ENST00000616856 RGS12O14924 1447 aa15.35■□□□□ 0.05
TULP4-206ENST00000616856 NUTM2BA6NNL0 878 aaPredicted RBP15.34■□□□□ 0.05
TULP4-206ENST00000616856 NUTM2EB1AL46 878 aaPredicted RBP15.34■□□□□ 0.05
TULP4-206ENST00000616856 TEFQ10587 303 aa15.34■□□□□ 0.05
TULP4-206ENST00000616856 NUTM2AQ8IVF1 878 aaPredicted RBP15.34■□□□□ 0.05
TULP4-206ENST00000616856 TBC1D2Q9BYX2 928 aa15.34■□□□□ 0.05
TULP4-206ENST00000616856 RNMTO43148 476 aaKnown RBP15.34■□□□□ 0.05
TULP4-206ENST00000616856 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.05
TULP4-206ENST00000616856 GCC1Q96CN9 775 aa15.33■□□□□ 0.05
TULP4-206ENST00000616856 EIF5BO60841 1220 aaKnown RBP15.33■□□□□ 0.04
TULP4-206ENST00000616856 CERKQ8TCT0 537 aa15.33■□□□□ 0.04
TULP4-206ENST00000616856 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.04
TULP4-206ENST00000616856 API5Q9BZZ5 524 aaKnown RBP15.33■□□□□ 0.04
TULP4-206ENST00000616856 COL14A1Q05707 1796 aaKnown RBP15.33■□□□□ 0.04
TULP4-206ENST00000616856 PHKG2P15735 406 aa15.32■□□□□ 0.04
TULP4-206ENST00000616856 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
TULP4-206ENST00000616856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.041e-6■■□□□ 12.5
TULP4-206ENST00000616856 IFNL2Q8IZJ0 200 aa15.31■□□□□ 0.04
TULP4-206ENST00000616856 OVOS2A0A0G2JMS6 1433 aa15.31■□□□□ 0.04
TULP4-206ENST00000616856 CYP27B1O15528 508 aa15.31■□□□□ 0.04
TULP4-206ENST00000616856 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
TULP4-206ENST00000616856 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
TULP4-206ENST00000616856 PARP4Q9UKK3 1724 aaKnown RBP15.3■□□□□ 0.04
TULP4-206ENST00000616856 BTBD11A6QL63 1104 aa15.3■□□□□ 0.04
TULP4-206ENST00000616856 IL2RBP14784 551 aa15.3■□□□□ 0.04
TULP4-206ENST00000616856 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
TULP4-206ENST00000616856 BABAM1Q9NWV8 329 aa15.29■□□□□ 0.04
TULP4-206ENST00000616856 KDM6AO15550 1401 aaPredicted RBP15.29■□□□□ 0.04
TULP4-206ENST00000616856 KCNQ3O43525 872 aa15.29■□□□□ 0.04
TULP4-206ENST00000616856 ZCRB1Q8TBF4 217 aaKnown RBP15.28■□□□□ 0.04
TULP4-206ENST00000616856 ATP10DQ9P241 1426 aa15.28■□□□□ 0.04
TULP4-206ENST00000616856 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
TULP4-206ENST00000616856 INTS3Q68E01 1043 aaKnown RBP15.28■□□□□ 0.04
TULP4-206ENST00000616856 NECTIN2Q92692 538 aa15.28■□□□□ 0.04
TULP4-206ENST00000616856 PLCH1Q4KWH8 1693 aa15.27■□□□□ 0.04
TULP4-206ENST00000616856 PLEKHG2Q9H7P9 1386 aa15.27■□□□□ 0.04
TULP4-206ENST00000616856 KDM3BQ7LBC6 1761 aa15.27■□□□□ 0.03
TULP4-206ENST00000616856 SCN11AQ9UI33 1791 aa15.27■□□□□ 0.03
TULP4-206ENST00000616856 G2E3Q7L622 706 aa15.27■□□□□ 0.03
TULP4-206ENST00000616856 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.03
TULP4-206ENST00000616856 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.03
TULP4-206ENST00000616856 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.03
TULP4-206ENST00000616856 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
TULP4-206ENST00000616856 DDX54Q8TDD1 881 aaKnown RBP15.26■□□□□ 0.03
TULP4-206ENST00000616856 EIF4A1P60842 406 aaKnown RBP15.26■□□□□ 0.03
TULP4-206ENST00000616856 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
TULP4-206ENST00000616856 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
TULP4-206ENST00000616856 MEIS3Q99687 375 aa15.26■□□□□ 0.03
TULP4-206ENST00000616856 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
TULP4-206ENST00000616856 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
TULP4-206ENST00000616856 F6X3S4 739 aa15.25■□□□□ 0.03
TULP4-206ENST00000616856 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
TULP4-206ENST00000616856 JCADQ9P266 1359 aa15.24■□□□□ 0.03
TULP4-206ENST00000616856 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
TULP4-206ENST00000616856 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
TULP4-206ENST00000616856 SLC39A6Q13433 755 aa15.23■□□□□ 0.03
TULP4-206ENST00000616856 C16orf71Q8IYS4 520 aaPredicted RBP15.23■□□□□ 0.03
TULP4-206ENST00000616856 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
TULP4-206ENST00000616856 STK31Q9BXU1 1019 aa15.23■□□□□ 0.03
TULP4-206ENST00000616856 EIF2S2P20042 333 aaKnown RBP15.23■□□□□ 0.03
TULP4-206ENST00000616856 CEP85Q6P2H3 762 aa15.23■□□□□ 0.03
TULP4-206ENST00000616856 TBC1D9Q6ZT07 1266 aa15.23■□□□□ 0.03
TULP4-206ENST00000616856 SHANK3Q9BYB0 1731 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 HDGFL1Q5TGJ6 251 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms