RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
PPP4R3B-206ENST00000616407 APPP05067 770 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 PRR36Q9H6K5 1346 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 CAVIN1Q6NZI2 390 aaKnown RBP15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 ORAI2Q96SN7 254 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 MYD88Q99836 296 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 ROBO2Q9HCK4 1378 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 WASHC4Q2M389 1173 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 IP6K1Q92551 441 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 ABCA6Q8N139 1617 aa15.9■□□□□ 0.14
PPP4R3B-206ENST00000616407 HIP1O00291 1037 aa15.89■□□□□ 0.14
PPP4R3B-206ENST00000616407 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.14
PPP4R3B-206ENST00000616407 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 INO80Q9ULG1 1556 aaPredicted RBP15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 PSMA5P28066 241 aa15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 MRE11P49959 708 aa15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 ADGRB3O60242 1522 aa15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 GLRX3O76003 335 aaKnown RBP15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 AKAP4Q5JQC9 854 aa15.89■□□□□ 0.13
PPP4R3B-206ENST00000616407 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
PPP4R3B-206ENST00000616407 CABLES1Q8TDN4 633 aa15.88■□□□□ 0.13
PPP4R3B-206ENST00000616407 CEP152O94986 1710 aa15.88■□□□□ 0.13
PPP4R3B-206ENST00000616407 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
PPP4R3B-206ENST00000616407 MAP3K5Q99683 1374 aa15.88■□□□□ 0.13
PPP4R3B-206ENST00000616407 PDE1AP54750 535 aa15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 KIAA2012Q0VF49 1180 aa15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 SF3A1Q15459 793 aaKnown RBP15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 KIF6Q6ZMV9 814 aa15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 LMTK2Q8IWU2 1503 aa15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 CCDC8Q9H0W5 538 aaPredicted RBP15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 PHAXQ9H814 394 aaKnown RBP15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
PPP4R3B-206ENST00000616407 ATP8B2P98198 1209 aa15.86■□□□□ 0.13
PPP4R3B-206ENST00000616407 PLEKHM2Q8IWE5 1019 aa15.86■□□□□ 0.13
PPP4R3B-206ENST00000616407 IL27Q8NEV9 243 aa15.86■□□□□ 0.13
PPP4R3B-206ENST00000616407 CYP46A1Q9Y6A2 500 aa15.86■□□□□ 0.13
PPP4R3B-206ENST00000616407 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
PPP4R3B-206ENST00000616407 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
PPP4R3B-206ENST00000616407 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.86■□□□□ 0.13
PPP4R3B-206ENST00000616407 FOSBP53539 338 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 A2ML1A8K2U0 1454 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 ATP7BP35670 1465 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 FMNL2Q96PY5 1086 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 AATKQ6ZMQ8 1374 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 GLI2P10070 1586 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 GOLGA6L6A8MZA4 724 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 RHPN1Q8TCX5 695 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 LAMC1P11047 1609 aa15.85■□□□□ 0.13
PPP4R3B-206ENST00000616407 JAKMIP1Q96N16 626 aaKnown RBP15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 JARID2Q92833 1246 aaPredicted RBP15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 LGR6Q9HBX8 967 aa15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 MSH6P52701 1360 aa15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 CPLX1O14810 134 aa15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 TRDNQ13061 729 aa15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 TNPO1Q92973 898 aaKnown RBP15.84■□□□□ 0.13
PPP4R3B-206ENST00000616407 OTUD7AQ8TE49 926 aaPredicted RBP15.83■□□□□ 0.13
PPP4R3B-206ENST00000616407 ATP5J2-PTCD1G3V325 749 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 SSFA2P28290 1259 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 CCDC57Q2TAC2 916 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 NBPF6Q5VWK0 638 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 RNF214Q8ND24 703 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 NBPF4Q96M43 638 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 A0A087WZG4 1122 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 CHMP4CQ96CF2 233 aa15.83■□□□□ 0.12
PPP4R3B-206ENST00000616407 NASPP49321 788 aaPredicted RBP15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 GLIPR1L2Q4G1C9 344 aa15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 HSPA2P54652 639 aa15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 KIDINS220Q9ULH0 1771 aa15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 NPHP3Q7Z494 1330 aa15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 BICD2Q8TD16 824 aa15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 CEP126Q9P2H0 1117 aa15.82■□□□□ 0.12
PPP4R3B-206ENST00000616407 FIBPO43427 364 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 NRDCO43847 1150 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 MBD3O95983 291 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 PIP4K2AP48426 406 aaPredicted RBP15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 STK3Q13188 491 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 COPS6Q7L5N1 327 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 RALYLQ86SE5 291 aaKnown RBP15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 CCDC158Q5M9N0 1113 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 CPLX2Q6PUV4 134 aaKnown RBP15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 PDRG1Q9NUG6 133 aa15.81■□□□□ 0.12
PPP4R3B-206ENST00000616407 SNRPA1P09661 255 aaKnown RBP15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 BLOC1S2Q6QNY1 142 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 UBE3BQ7Z3V4 1068 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 FKBP4Q02790 459 aaKnown RBP eCLIP15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 ANKRD13DQ6ZTN6 518 aa15.8■□□□□ 0.12
PPP4R3B-206ENST00000616407 ABCC4O15439 1325 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms