RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 FAM107BQ9H098 131 aa15.87■□□□□ 0.13
PPP4R3B-205ENST00000616288 USP16Q9Y5T5 823 aa15.87■□□□□ 0.13
PPP4R3B-205ENST00000616288 EXOC6BQ9Y2D4 811 aa15.87■□□□□ 0.13
PPP4R3B-205ENST00000616288 PPP2R5AQ15172 486 aa15.87■□□□□ 0.13
PPP4R3B-205ENST00000616288 LIG1P18858 919 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 CFAP100Q494V2 611 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 RNF187Q5TA31 235 aaPredicted RBP15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 RUFY2Q8WXA3 655 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 SPAG9O60271 1321 aaKnown RBP15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 ISM2Q6H9L7 571 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 SLC12A5Q9H2X9 1139 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 GJB2P29033 226 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 TWISTNBQ3B726 338 aaPredicted RBP15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 CARD6Q9BX69 1037 aa15.86■□□□□ 0.13
PPP4R3B-205ENST00000616288 GSDMDP57764 484 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 CEP57Q86XR8 500 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 RABEP2Q9H5N1 569 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 RPAINQ86UA6 219 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 NECTIN2Q92692 538 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 SPTLC3Q9NUV7 552 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 AKAP17AQ02040 695 aaKnown RBP15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 CAGE1Q8TC20 777 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 KIF2CQ99661 725 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 NCAPGQ9BPX3 1015 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 ZCCHC17Q9NP64 241 aaKnown RBP15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 CYP46A1Q9Y6A2 500 aa15.85■□□□□ 0.13
PPP4R3B-205ENST00000616288 SEC31AO94979 1220 aaKnown RBP15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 CRACR2AQ9BSW2 395 aa15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 DDX19AQ9NUU7 478 aaKnown RBP15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 RALGAPBQ86X10 1494 aa15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 BRD1O95696 1058 aa15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 TMPOP42166 694 aaKnown RBP15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 ZNF75DP51815 510 aa15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 ROCK1Q13464 1354 aa15.84■□□□□ 0.13
PPP4R3B-205ENST00000616288 NEBLO76041 1014 aa15.83■□□□□ 0.13
PPP4R3B-205ENST00000616288 F13A1P00488 732 aa15.83■□□□□ 0.13
PPP4R3B-205ENST00000616288 GNAI1P63096 354 aa15.83■□□□□ 0.13
PPP4R3B-205ENST00000616288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 SCAND2PQ9GZW5 306 aaPredicted RBP15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 CBX8Q9HC52 389 aa15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 ZSCAN12O43309 604 aa15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 KIF4BQ2VIQ3 1234 aa15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 FAM212AQ96EL1 285 aa15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
PPP4R3B-205ENST00000616288 BIN1O00499 593 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 CLEC17AQ6ZS10 378 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 GOLGA5Q8TBA6 731 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 BRMS1Q9HCU9 246 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 DAPK1P53355 1430 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 CWC27Q6UX04 472 aaKnown RBP15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 EP400NLQ6ZTU2 488 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 ANO10Q9NW15 660 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 KDM6BO15054 1643 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
PPP4R3B-205ENST00000616288 BRPF1P55201 1214 aaPredicted RBP15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 PLEKHM2Q8IWE5 1019 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 TESK2Q96S53 571 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 ANKRD36BQ8N2N9 1353 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 EBAG9O00559 213 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 PNMA6AP0CW24 399 aaPredicted RBP15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 CLCN6P51797 869 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 SYCP1Q15431 976 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 FAM173BQ6P4H8 233 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 CFAP43Q8NDM7 1665 aa15.81■□□□□ 0.12
PPP4R3B-205ENST00000616288 SYT1P21579 422 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 NBPF11Q86T75 865 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 GBP3Q9H0R5 595 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 LIG3P49916 1009 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 RAI14Q9P0K7 980 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 CYP2C19P33261 490 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 CACTINQ8WUQ7 758 aaKnown RBP15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 CEP83Q9Y592 693 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 NCOA3Q9Y6Q9 1424 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 GBP2P32456 591 aaPredicted RBP15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 SSR1P43307 286 aaKnown RBP15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 SLC20A2Q08357 652 aa15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
PPP4R3B-205ENST00000616288 INSRP06213 1382 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms