RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
AL353770.3-201ENST00000616253 PTPRCP08575 1304 aa12.7□□□□□ -0.38
AL353770.3-201ENST00000616253 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
AL353770.3-201ENST00000616253 PLEKHG2Q9H7P9 1386 aa12.7□□□□□ -0.38
AL353770.3-201ENST00000616253 PARP4Q9UKK3 1724 aaKnown RBP12.7□□□□□ -0.38
AL353770.3-201ENST00000616253 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
AL353770.3-201ENST00000616253 WDR17Q8IZU2 1322 aa12.7□□□□□ -0.38
AL353770.3-201ENST00000616253 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
AL353770.3-201ENST00000616253 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
AL353770.3-201ENST00000616253 CCDC30Q5VVM6 783 aa12.69□□□□□ -0.38
AL353770.3-201ENST00000616253 STK31Q9BXU1 1019 aa12.69□□□□□ -0.38
AL353770.3-201ENST00000616253 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
AL353770.3-201ENST00000616253 RGS3P49796 1198 aa12.68□□□□□ -0.38
AL353770.3-201ENST00000616253 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
AL353770.3-201ENST00000616253 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
AL353770.3-201ENST00000616253 CHMP4BQ9H444 224 aaKnown RBP12.68□□□□□ -0.38
AL353770.3-201ENST00000616253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
AL353770.3-201ENST00000616253 KDM6AO15550 1401 aaPredicted RBP12.68□□□□□ -0.38
AL353770.3-201ENST00000616253 KCNQ3O43525 872 aa12.67□□□□□ -0.38
AL353770.3-201ENST00000616253 PHKG2P15735 406 aa12.67□□□□□ -0.38
AL353770.3-201ENST00000616253 HDAC1Q13547 482 aaPredicted RBP12.67□□□□□ -0.38
AL353770.3-201ENST00000616253 TOM1L2Q6ZVM7 507 aa12.67□□□□□ -0.38
AL353770.3-201ENST00000616253 G2E3Q7L622 706 aa12.67□□□□□ -0.38
AL353770.3-201ENST00000616253 COL22A1Q8NFW1 1626 aaPredicted RBP12.67□□□□□ -0.38
AL353770.3-201ENST00000616253 INTS3Q68E01 1043 aaKnown RBP12.67□□□□□ -0.38
AL353770.3-201ENST00000616253 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
AL353770.3-201ENST00000616253 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 HOXB7P09629 217 aa12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 N4BP2Q86UW6 1770 aaPredicted RBP12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 PDE4AP27815 886 aa12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 FLIIQ13045 1269 aa12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
AL353770.3-201ENST00000616253 COL14A1Q05707 1796 aaKnown RBP12.65□□□□□ -0.39
AL353770.3-201ENST00000616253 MRC1P22897 1456 aa12.65□□□□□ -0.39
AL353770.3-201ENST00000616253 CYP27B1O15528 508 aa12.64□□□□□ -0.39
AL353770.3-201ENST00000616253 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
AL353770.3-201ENST00000616253 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
AL353770.3-201ENST00000616253 SHANK3Q9BYB0 1731 aa12.64□□□□□ -0.39
AL353770.3-201ENST00000616253 F6X3S4 739 aa12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 LARP1Q6PKG0 1096 aaKnown RBP12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 EVA1CP58658 441 aa12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 FKBP5Q13451 457 aaPredicted RBP12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 BACH2Q9BYV9 841 aa12.63□□□□□ -0.39
AL353770.3-201ENST00000616253 SLC4A10Q6U841 1118 aa12.62□□□□□ -0.39
AL353770.3-201ENST00000616253 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
AL353770.3-201ENST00000616253 C5P01031 1676 aa12.62□□□□□ -0.39
AL353770.3-201ENST00000616253 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
AL353770.3-201ENST00000616253 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
AL353770.3-201ENST00000616253 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
AL353770.3-201ENST00000616253 HSP90AB1P08238 724 aaKnown RBP12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 JCADQ9P266 1359 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 IL2RBP14784 551 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 CCT4P50991 539 aaKnown RBP12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
AL353770.3-201ENST00000616253 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 SLC39A6Q13433 755 aa12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 NFATC2IPQ8NCF5 419 aa12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 MEIS3Q99687 375 aa12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 ZNF790Q6PG37 636 aa12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 SIRT2Q8IXJ6 389 aa12.6□□□□□ -0.39
AL353770.3-201ENST00000616253 PLCH1Q4KWH8 1693 aa12.59□□□□□ -0.39
AL353770.3-201ENST00000616253 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
AL353770.3-201ENST00000616253 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
AL353770.3-201ENST00000616253 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
AL353770.3-201ENST00000616253 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
AL353770.3-201ENST00000616253 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
AL353770.3-201ENST00000616253 ANXA1P04083 346 aa12.58□□□□□ -0.4
AL353770.3-201ENST00000616253 CABP4P57796 275 aa12.58□□□□□ -0.4
AL353770.3-201ENST00000616253 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
AL353770.3-201ENST00000616253 WNK3Q9BYP7 1800 aa12.57□□□□□ -0.4
AL353770.3-201ENST00000616253 NUCB1Q02818 461 aa12.57□□□□□ -0.4
AL353770.3-201ENST00000616253 GCC1Q96CN9 775 aa12.57□□□□□ -0.4
AL353770.3-201ENST00000616253 TOGARAM1Q9Y4F4 1720 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 GLI3P10071 1580 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 CEP85Q6P2H3 762 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 ANKRD44Q8N8A2 993 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 PAPPAQ13219 1627 aa12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 DDX54Q8TDD1 881 aaKnown RBP12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
AL353770.3-201ENST00000616253 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
AL353770.3-201ENST00000616253 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
AL353770.3-201ENST00000616253 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
AL353770.3-201ENST00000616253 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
AL353770.3-201ENST00000616253 RPAP2Q8IXW5 612 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms