RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 SIK1P57059 783 aa14.02□□□□□ -0.17
LINC00649-217ENST00000616030 ATG3Q9NT62 314 aa14.02□□□□□ -0.17
LINC00649-217ENST00000616030 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
LINC00649-217ENST00000616030 UTRNP46939 3433 aa14.02□□□□□ -0.17
LINC00649-217ENST00000616030 SIPA1L3O60292 1781 aaPredicted RBP14.01□□□□□ -0.17
LINC00649-217ENST00000616030 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
LINC00649-217ENST00000616030 ANP32CO43423 234 aa14.01□□□□□ -0.17
LINC00649-217ENST00000616030 C1orf141Q5JVX7 400 aa14.01□□□□□ -0.17
LINC00649-217ENST00000616030 TFCP2L1Q9NZI6 479 aa14.01□□□□□ -0.17
LINC00649-217ENST00000616030 TJP1Q07157 1748 aa14.01□□□□□ -0.17
LINC00649-217ENST00000616030 PPP2R1AP30153 589 aa14□□□□□ -0.17
LINC00649-217ENST00000616030 MIER1Q8N108 512 aa14□□□□□ -0.17
LINC00649-217ENST00000616030 FLAD1Q8NFF5 587 aa14□□□□□ -0.17
LINC00649-217ENST00000616030 HMOX1P09601 288 aa13.98□□□□□ -0.17
LINC00649-217ENST00000616030 SSFA2P28290 1259 aa13.98□□□□□ -0.17
LINC00649-217ENST00000616030 ITPK1Q13572 414 aa13.98□□□□□ -0.17
LINC00649-217ENST00000616030 LINC00116Q8NCU8 138 aa13.98□□□□□ -0.17
LINC00649-217ENST00000616030 CFAP53Q96M91 514 aa13.98□□□□□ -0.17
LINC00649-217ENST00000616030 KCPQ6ZWJ8 1503 aa13.98□□□□□ -0.17
LINC00649-217ENST00000616030 GOLGB1Q14789 3259 aaKnown RBP13.97□□□□□ -0.17
LINC00649-217ENST00000616030 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
LINC00649-217ENST00000616030 MYH14Q7Z406 1995 aaKnown RBP13.97□□□□□ -0.17
LINC00649-217ENST00000616030 MTHFSDQ2M296 383 aaKnown RBP13.97□□□□□ -0.17
LINC00649-217ENST00000616030 COL23A1Q86Y22 540 aaPredicted RBP13.97□□□□□ -0.17
LINC00649-217ENST00000616030 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
LINC00649-217ENST00000616030 RSPH6AQ9H0K4 717 aa13.97□□□□□ -0.17
LINC00649-217ENST00000616030 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
LINC00649-217ENST00000616030 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
LINC00649-217ENST00000616030 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.17
LINC00649-217ENST00000616030 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
LINC00649-217ENST00000616030 CABP4P57796 275 aa13.96□□□□□ -0.17
LINC00649-217ENST00000616030 RC3H1Q5TC82 1133 aaKnown RBP13.96□□□□□ -0.17
LINC00649-217ENST00000616030 SLC52A2Q9HAB3 445 aa13.96□□□□□ -0.17
LINC00649-217ENST00000616030 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
LINC00649-217ENST00000616030 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
LINC00649-217ENST00000616030 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
LINC00649-217ENST00000616030 AK7Q96M32 723 aa13.95□□□□□ -0.18
LINC00649-217ENST00000616030 ARXQ96QS3 562 aa13.95□□□□□ -0.18
LINC00649-217ENST00000616030 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
LINC00649-217ENST00000616030 NFATC2IPQ8NCF5 419 aa13.94□□□□□ -0.18
LINC00649-217ENST00000616030 FHDC1Q9C0D6 1143 aaPredicted RBP13.94□□□□□ -0.18
LINC00649-217ENST00000616030 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
LINC00649-217ENST00000616030 FCHSD2O94868 740 aa13.93□□□□□ -0.18
LINC00649-217ENST00000616030 SYT17Q9BSW7 474 aa13.93□□□□□ -0.18
LINC00649-217ENST00000616030 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
LINC00649-217ENST00000616030 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
LINC00649-217ENST00000616030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
LINC00649-217ENST00000616030 POLD1P28340 1107 aa13.92□□□□□ -0.18
LINC00649-217ENST00000616030 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
LINC00649-217ENST00000616030 GNAT3A8MTJ3 354 aa13.91□□□□□ -0.18
LINC00649-217ENST00000616030 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
LINC00649-217ENST00000616030 RALBP1Q15311 655 aa13.91□□□□□ -0.18
LINC00649-217ENST00000616030 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
LINC00649-217ENST00000616030 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
LINC00649-217ENST00000616030 PRKRIP1Q9H875 184 aaPredicted RBP13.9□□□□□ -0.18
LINC00649-217ENST00000616030 GNPATO15228 680 aa13.89□□□□□ -0.19
LINC00649-217ENST00000616030 RPS6KA4O75676 772 aa13.89□□□□□ -0.19
LINC00649-217ENST00000616030 IL17REQ8NFR9 667 aa13.89□□□□□ -0.19
LINC00649-217ENST00000616030 PHACTR3Q96KR7 559 aa13.89□□□□□ -0.19
LINC00649-217ENST00000616030 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
LINC00649-217ENST00000616030 DLG5Q8TDM6 1919 aa13.88□□□□□ -0.19
LINC00649-217ENST00000616030 HTATSF1O43719 755 aaKnown RBP13.88□□□□□ -0.19
LINC00649-217ENST00000616030 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
LINC00649-217ENST00000616030 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
LINC00649-217ENST00000616030 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
LINC00649-217ENST00000616030 U2AF1L5P0DN76 240 aaPredicted RBP13.87□□□□□ -0.19
LINC00649-217ENST00000616030 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
LINC00649-217ENST00000616030 U2AF1Q01081 240 aaKnown RBP eCLIP13.87□□□□□ -0.19
LINC00649-217ENST00000616030 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
LINC00649-217ENST00000616030 PLEKHF1Q96S99 279 aa13.87□□□□□ -0.19
LINC00649-217ENST00000616030 CD2APQ9Y5K6 639 aa13.86□□□□□ -0.19
LINC00649-217ENST00000616030 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
LINC00649-217ENST00000616030 CHD4Q14839 1912 aa13.86□□□□□ -0.19
LINC00649-217ENST00000616030 MSH5O43196 834 aa13.85□□□□□ -0.19
LINC00649-217ENST00000616030 PHF14O94880 888 aa13.85□□□□□ -0.19
LINC00649-217ENST00000616030 CYP19A1P11511 503 aaPredicted RBP13.85□□□□□ -0.19
LINC00649-217ENST00000616030 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
LINC00649-217ENST00000616030 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
LINC00649-217ENST00000616030 ARHGEF1Q92888 912 aaKnown RBP13.85□□□□□ -0.19
LINC00649-217ENST00000616030 SOS1Q07889 1333 aaPredicted RBP13.85□□□□□ -0.19
LINC00649-217ENST00000616030 HEG1Q9ULI3 1381 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 KDM3BQ7LBC6 1761 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 C10orf71Q711Q0 1435 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 TEFQ10587 303 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 TRAPPC3LQ5T215 181 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 MSL1Q68DK7 614 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 SCN7AQ01118 1682 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 USP42Q9H9J4 1324 aaKnown RBP13.84□□□□□ -0.19
LINC00649-217ENST00000616030 NRXN2Q9P2S2 1712 aa13.84□□□□□ -0.19
LINC00649-217ENST00000616030 GYS1P13807 737 aa13.83□□□□□ -0.2
LINC00649-217ENST00000616030 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
LINC00649-217ENST00000616030 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.2
LINC00649-217ENST00000616030 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
LINC00649-217ENST00000616030 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
LINC00649-217ENST00000616030 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
LINC00649-217ENST00000616030 NLGN2Q8NFZ4 835 aa13.82□□□□□ -0.2
LINC00649-217ENST00000616030 PNNQ9H307 717 aaKnown RBP13.82□□□□□ -0.2
LINC00649-217ENST00000616030 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms