RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 TOMM70O94826 608 aa25.28■■□□□ 1.64
FAM228B-210ENST00000615575 TMOD3Q9NYL9 352 aa25.28■■□□□ 1.64
FAM228B-210ENST00000615575 ATP6V1AP38606 617 aa25.27■■□□□ 1.64
FAM228B-210ENST00000615575 HTRA3P83110 453 aa25.26■■□□□ 1.63
FAM228B-210ENST00000615575 C4AP0C0L4 1744 aa25.26■■□□□ 1.63
FAM228B-210ENST00000615575 KDRP35968 1356 aa25.25■■□□□ 1.63
FAM228B-210ENST00000615575 SPG7Q9UQ90 795 aa25.25■■□□□ 1.63
FAM228B-210ENST00000615575 ARHGAP27Q6ZUM4 889 aa25.24■■□□□ 1.63
FAM228B-210ENST00000615575 ATG3Q9NT62 314 aa25.23■■□□□ 1.63
FAM228B-210ENST00000615575 PPM1GO15355 546 aaPredicted RBP25.22■■□□□ 1.63
FAM228B-210ENST00000615575 DPEP1P16444 411 aa25.22■■□□□ 1.63
FAM228B-210ENST00000615575 COL5A3P25940 1745 aaPredicted RBP25.22■■□□□ 1.63
FAM228B-210ENST00000615575 TGFB2P61812 414 aa25.21■■□□□ 1.63
FAM228B-210ENST00000615575 FCHSD2O94868 740 aa25.2■■□□□ 1.63
FAM228B-210ENST00000615575 PHKG2P15735 406 aa25.2■■□□□ 1.63
FAM228B-210ENST00000615575 TMF1P82094 1093 aa25.2■■□□□ 1.63
FAM228B-210ENST00000615575 SLC4A9Q96Q91 983 aa25.2■■□□□ 1.63
FAM228B-210ENST00000615575 EYA1Q99502 592 aa25.2■■□□□ 1.63
FAM228B-210ENST00000615575 CARD14Q9BXL6 1004 aa25.19■■□□□ 1.62
FAM228B-210ENST00000615575 ARFGEF1Q9Y6D6 1849 aa25.19■■□□□ 1.62
FAM228B-210ENST00000615575 KCPQ6ZWJ8 1503 aa25.18■■□□□ 1.62
FAM228B-210ENST00000615575 C9orf131Q5VYM1 1079 aa25.18■■□□□ 1.62
FAM228B-210ENST00000615575 RTCBQ9Y3I0 505 aaKnown RBP25.18■■□□□ 1.62
FAM228B-210ENST00000615575 GYS1P13807 737 aa25.17■■□□□ 1.62
FAM228B-210ENST00000615575 TRAPPC3LQ5T215 181 aa25.17■■□□□ 1.62
FAM228B-210ENST00000615575 COL13A1Q5TAT6 717 aaPredicted RBP25.17■■□□□ 1.62
FAM228B-210ENST00000615575 IFNL2Q8IZJ0 200 aa25.17■■□□□ 1.62
FAM228B-210ENST00000615575 RBM46Q8TBY0 533 aaKnown RBP25.17■■□□□ 1.62
FAM228B-210ENST00000615575 ZNF831Q5JPB2 1677 aa25.16■■□□□ 1.62
FAM228B-210ENST00000615575 SLC24A1O60721 1099 aa25.16■■□□□ 1.62
FAM228B-210ENST00000615575 ARHGEF1Q92888 912 aaKnown RBP25.16■■□□□ 1.62
FAM228B-210ENST00000615575 CCDC87Q9NVE4 849 aa25.16■■□□□ 1.62
FAM228B-210ENST00000615575 MYH14Q7Z406 1995 aaKnown RBP25.15■■□□□ 1.62
FAM228B-210ENST00000615575 NLGN1Q8N2Q7 840 aa25.15■■□□□ 1.62
FAM228B-210ENST00000615575 KLRG1Q96E93 195 aa25.15■■□□□ 1.62
FAM228B-210ENST00000615575 RBM42Q9BTD8 480 aaKnown RBP25.15■■□□□ 1.62
FAM228B-210ENST00000615575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.15■■□□□ 1.62
FAM228B-210ENST00000615575 CAPN15O75808 1086 aa25.14■■□□□ 1.61
FAM228B-210ENST00000615575 KCNA3P22001 575 aa25.14■■□□□ 1.61
FAM228B-210ENST00000615575 WASHC2AQ641Q2 1341 aa25.14■■□□□ 1.61
FAM228B-210ENST00000615575 PLEKHG2Q9H7P9 1386 aa25.13■■□□□ 1.61
FAM228B-210ENST00000615575 C16orf71Q8IYS4 520 aaPredicted RBP25.12■■□□□ 1.61
FAM228B-210ENST00000615575 PARP3Q9Y6F1 533 aa25.12■■□□□ 1.61
FAM228B-210ENST00000615575 CNTNAP4Q9C0A0 1308 aa25.11■■□□□ 1.61
FAM228B-210ENST00000615575 JMYQ8N9B5 988 aa25.1■■□□□ 1.61
FAM228B-210ENST00000615575 TNRC6CQ9HCJ0 1690 aaKnown RBP25.1■■□□□ 1.61
FAM228B-210ENST00000615575 ADRA2BP18089 450 aa25.09■■□□□ 1.61
FAM228B-210ENST00000615575 RFC4P35249 363 aa25.09■■□□□ 1.61
FAM228B-210ENST00000615575 KDM6AO15550 1401 aaPredicted RBP25.09■■□□□ 1.61
FAM228B-210ENST00000615575 DCAF5Q96JK2 942 aa25.08■■□□□ 1.61
FAM228B-210ENST00000615575 RNF181Q9P0P0 153 aa25.08■■□□□ 1.61
FAM228B-210ENST00000615575 SRP68Q9UHB9 627 aaKnown RBP25.08■■□□□ 1.61
FAM228B-210ENST00000615575 PCNTO95613 3336 aa25.08■■□□□ 1.61
FAM228B-210ENST00000615575 RPS6KA4O75676 772 aa25.07■■□□□ 1.6
FAM228B-210ENST00000615575 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
FAM228B-210ENST00000615575 RC3H1Q5TC82 1133 aaKnown RBP25.07■■□□□ 1.6
FAM228B-210ENST00000615575 POLKQ9UBT6 870 aa25.07■■□□□ 1.6
FAM228B-210ENST00000615575 SBF1O95248 1867 aa25.07■■□□□ 1.6
FAM228B-210ENST00000615575 DDR1Q08345 913 aa25.06■■□□□ 1.6
FAM228B-210ENST00000615575 FSTL1Q12841 308 aa25.06■■□□□ 1.6
FAM228B-210ENST00000615575 TJP1Q07157 1748 aa25.06■■□□□ 1.6
FAM228B-210ENST00000615575 RRAGCQ9HB90 399 aa25.05■■□□□ 1.6
FAM228B-210ENST00000615575 PIM2Q9P1W9 311 aa25.05■■□□□ 1.6
FAM228B-210ENST00000615575 CHRNA5P30532 468 aa25.05■■□□□ 1.6
FAM228B-210ENST00000615575 KDM2BQ8NHM5 1336 aa25.04■■□□□ 1.6
FAM228B-210ENST00000615575 FKBP8Q14318 412 aa25.04■■□□□ 1.6
FAM228B-210ENST00000615575 DALRD3Q5D0E6 543 aaKnown RBP25.04■■□□□ 1.6
FAM228B-210ENST00000615575 ERVV-2B6SEH9 535 aa25.03■■□□□ 1.6
FAM228B-210ENST00000615575 CDCA8Q53HL2 280 aa25.03■■□□□ 1.6
FAM228B-210ENST00000615575 ADAMTS7Q9UKP4 1686 aa25.02■■□□□ 1.6
FAM228B-210ENST00000615575 TNNT2P45379 298 aaPredicted RBP25.02■■□□□ 1.6
FAM228B-210ENST00000615575 TNS4Q8IZW8 715 aa25.02■■□□□ 1.6
FAM228B-210ENST00000615575 USP42Q9H9J4 1324 aaKnown RBP25.01■■□□□ 1.59
FAM228B-210ENST00000615575 PTCD1O75127 700 aaKnown RBP25.01■■□□□ 1.59
FAM228B-210ENST00000615575 RASSF7Q02833 373 aa25.01■■□□□ 1.59
FAM228B-210ENST00000615575 CRKLP46109 303 aaKnown RBP25■■□□□ 1.59
FAM228B-210ENST00000615575 ZNF530Q6P9A1 599 aaPredicted RBP24.99■■□□□ 1.59
FAM228B-210ENST00000615575 CABP4P57796 275 aa24.98■■□□□ 1.59
FAM228B-210ENST00000615575 SMC1BQ8NDV3 1235 aa24.96■■□□□ 1.59
FAM228B-210ENST00000615575 TIAM2Q8IVF5 1701 aa24.96■■□□□ 1.59
FAM228B-210ENST00000615575 POLRMTO00411 1230 aaKnown RBP24.95■■□□□ 1.59
FAM228B-210ENST00000615575 HSP90AB1P08238 724 aaKnown RBP24.95■■□□□ 1.59
FAM228B-210ENST00000615575 AFDNP55196 1824 aaKnown RBP24.95■■□□□ 1.58
FAM228B-210ENST00000615575 PRELPP51888 382 aa24.94■■□□□ 1.58
FAM228B-210ENST00000615575 PLEKHO1Q53GL0 409 aaPredicted RBP24.93■■□□□ 1.58
FAM228B-210ENST00000615575 HSPA1AP0DMV8 641 aaKnown RBP24.93■■□□□ 1.58
FAM228B-210ENST00000615575 HSPA1BP0DMV9 641 aaKnown RBP24.93■■□□□ 1.58
FAM228B-210ENST00000615575 AEBP1Q8IUX7 1158 aa24.93■■□□□ 1.58
FAM228B-210ENST00000615575 DLEC1Q9Y238 1755 aa24.92■■□□□ 1.58
FAM228B-210ENST00000615575 INTS5Q6P9B9 1019 aaKnown RBP24.91■■□□□ 1.58
FAM228B-210ENST00000615575 SCN11AQ9UI33 1791 aa24.9■■□□□ 1.58
FAM228B-210ENST00000615575 TM4SF1P30408 202 aa24.9■■□□□ 1.58
FAM228B-210ENST00000615575 MTHFSP49914 203 aa24.9■■□□□ 1.58
FAM228B-210ENST00000615575 USPL1Q5W0Q7 1092 aa24.9■■□□□ 1.58
FAM228B-210ENST00000615575 NFATC2IPQ8NCF5 419 aa24.9■■□□□ 1.58
FAM228B-210ENST00000615575 NRXN2Q9P2S2 1712 aa24.89■■□□□ 1.58
FAM228B-210ENST00000615575 POLR3GLQ9BT43 218 aa24.89■■□□□ 1.57
FAM228B-210ENST00000615575 CCDC88AQ3V6T2 1871 aa24.89■■□□□ 1.57
FAM228B-210ENST00000615575 DNAJC10Q8IXB1 793 aa24.88■■□□□ 1.57
FAM228B-210ENST00000615575 AMOTQ4VCS5 1084 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms