RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 RNMTO43148 476 aaKnown RBP24.04■■□□□ 1.44
MMP28-204ENST00000615136 NUCB1Q02818 461 aa24.03■■□□□ 1.44
MMP28-204ENST00000615136 DAXXQ9UER7 740 aaPredicted RBP24.03■■□□□ 1.44
MMP28-204ENST00000615136 EIF4A1P60842 406 aaKnown RBP24.03■■□□□ 1.44
MMP28-204ENST00000615136 CCDC30Q5VVM6 783 aa24.03■■□□□ 1.44
MMP28-204ENST00000615136 MEIS3Q99687 375 aa24.03■■□□□ 1.44
MMP28-204ENST00000615136 STK31Q9BXU1 1019 aa24.03■■□□□ 1.44
MMP28-204ENST00000615136 C1orf141Q5JVX7 400 aa24.02■■□□□ 1.44
MMP28-204ENST00000615136 SLC4A10Q6U841 1118 aa24.01■■□□□ 1.43
MMP28-204ENST00000615136 LNPKQ9C0E8 428 aa24.01■■□□□ 1.43
MMP28-204ENST00000615136 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
MMP28-204ENST00000615136 SLC4A3P48751 1232 aa24.01■■□□□ 1.43
MMP28-204ENST00000615136 TEFQ10587 303 aa24.01■■□□□ 1.43
MMP28-204ENST00000615136 FLIIQ13045 1269 aa24.01■■□□□ 1.43
MMP28-204ENST00000615136 MEGF6O75095 1541 aa24■■□□□ 1.43
MMP28-204ENST00000615136 BTBD11A6QL63 1104 aa24■■□□□ 1.43
MMP28-204ENST00000615136 HDGFL1Q5TGJ6 251 aa23.99■■□□□ 1.43
MMP28-204ENST00000615136 CHD1LQ86WJ1 897 aa23.99■■□□□ 1.43
MMP28-204ENST00000615136 SOS2Q07890 1332 aaPredicted RBP23.99■■□□□ 1.43
MMP28-204ENST00000615136 CSB-PGBD3P0DP91 1061 aa23.98■■□□□ 1.43
MMP28-204ENST00000615136 FKBP5Q13451 457 aaPredicted RBP23.98■■□□□ 1.43
MMP28-204ENST00000615136 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
MMP28-204ENST00000615136 PHAXQ9H814 394 aaKnown RBP23.97■■□□□ 1.43
MMP28-204ENST00000615136 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
MMP28-204ENST00000615136 CPDO75976 1380 aa23.97■■□□□ 1.43
MMP28-204ENST00000615136 ANKRD45Q5TZF3 282 aa23.96■■□□□ 1.43
MMP28-204ENST00000615136 RAPGEF4Q8WZA2 1011 aa23.96■■□□□ 1.43
MMP28-204ENST00000615136 GCC1Q96CN9 775 aa23.96■■□□□ 1.43
MMP28-204ENST00000615136 ADAMTS7Q9UKP4 1686 aa23.96■■□□□ 1.43
MMP28-204ENST00000615136 CACNA1FO60840 1977 aa23.96■■□□□ 1.43
MMP28-204ENST00000615136 SIPA1L3O60292 1781 aaPredicted RBP23.96■■□□□ 1.43
MMP28-204ENST00000615136 CEP85Q6P2H3 762 aa23.95■■□□□ 1.42
MMP28-204ENST00000615136 ANKRD44Q8N8A2 993 aa23.94■■□□□ 1.42
MMP28-204ENST00000615136 OVOS2A0A0G2JMS6 1433 aa23.94■■□□□ 1.42
MMP28-204ENST00000615136 TBC1D32Q96NH3 1257 aa23.93■■□□□ 1.42
MMP28-204ENST00000615136 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
MMP28-204ENST00000615136 ABCC6O95255 1503 aa23.93■■□□□ 1.42
MMP28-204ENST00000615136 PRAMEF22A3QJZ6 481 aa23.93■■□□□ 1.42
MMP28-204ENST00000615136 TATP17735 454 aaPredicted RBP23.93■■□□□ 1.42
MMP28-204ENST00000615136 CCT4P50991 539 aaKnown RBP23.93■■□□□ 1.42
MMP28-204ENST00000615136 UPF2Q9HAU5 1272 aaKnown RBP23.93■■□□□ 1.42
MMP28-204ENST00000615136 ANXA1P04083 346 aa23.92■■□□□ 1.42
MMP28-204ENST00000615136 CHPF2Q9P2E5 772 aa23.92■■□□□ 1.42
MMP28-204ENST00000615136 PHKG2P15735 406 aa23.91■■□□□ 1.42
MMP28-204ENST00000615136 DCTPP1Q9H773 170 aa23.91■■□□□ 1.42
MMP28-204ENST00000615136 SCN11AQ9UI33 1791 aa23.9■■□□□ 1.42
MMP28-204ENST00000615136 ABCA3Q99758 1704 aa23.9■■□□□ 1.42
MMP28-204ENST00000615136 RPAP2Q8IXW5 612 aaPredicted RBP23.89■■□□□ 1.42
MMP28-204ENST00000615136 PRDM11Q9NQV5 511 aa23.89■■□□□ 1.42
MMP28-204ENST00000615136 HEG1Q9ULI3 1381 aa23.89■■□□□ 1.42
MMP28-204ENST00000615136 HOXB7P09629 217 aa23.89■■□□□ 1.41
MMP28-204ENST00000615136 CYP27B1O15528 508 aa23.88■■□□□ 1.41
MMP28-204ENST00000615136 NFKBIBQ15653 356 aa23.88■■□□□ 1.41
MMP28-204ENST00000615136 GIGYF1O75420 1035 aaPredicted RBP23.88■■□□□ 1.41
MMP28-204ENST00000615136 SPG7Q9UQ90 795 aa23.88■■□□□ 1.41
MMP28-204ENST00000615136 N4BP2Q86UW6 1770 aaPredicted RBP23.88■■□□□ 1.41
MMP28-204ENST00000615136 NHSL1Q5SYE7 1610 aa23.87■■□□□ 1.41
MMP28-204ENST00000615136 SLC39A6Q13433 755 aa23.87■■□□□ 1.41
MMP28-204ENST00000615136 BECN1Q14457 450 aa23.87■■□□□ 1.41
MMP28-204ENST00000615136 PKD1L3Q7Z443 1732 aa23.86■■□□□ 1.41
MMP28-204ENST00000615136 PROSER3Q2NL68 480 aa23.86■■□□□ 1.41
MMP28-204ENST00000615136 BCL11AQ9H165 835 aa23.86■■□□□ 1.41
MMP28-204ENST00000615136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.86■■□□□ 1.41
MMP28-204ENST00000615136 NFATC2IPQ8NCF5 419 aa23.85■■□□□ 1.41
MMP28-204ENST00000615136 SLC52A2Q9HAB3 445 aa23.85■■□□□ 1.41
MMP28-204ENST00000615136 IFNL2Q8IZJ0 200 aa23.84■■□□□ 1.41
MMP28-204ENST00000615136 PXDNLA1KZ92 1463 aa23.84■■□□□ 1.41
MMP28-204ENST00000615136 C16orf71Q8IYS4 520 aaPredicted RBP23.84■■□□□ 1.41
MMP28-204ENST00000615136 WDR17Q8IZU2 1322 aa23.83■■□□□ 1.41
MMP28-204ENST00000615136 COL5A2P05997 1499 aaPredicted RBP23.83■■□□□ 1.41
MMP28-204ENST00000615136 USP44Q9H0E7 712 aa23.83■■□□□ 1.41
MMP28-204ENST00000615136 APBB1O00213 710 aa23.82■■□□□ 1.4
MMP28-204ENST00000615136 GNAI2P04899 355 aa23.82■■□□□ 1.4
MMP28-204ENST00000615136 PI4KAP2A4QPH2 592 aa23.81■■□□□ 1.4
MMP28-204ENST00000615136 SMARCA5O60264 1052 aaPredicted RBP23.81■■□□□ 1.4
MMP28-204ENST00000615136 ZNF790Q6PG37 636 aa23.81■■□□□ 1.4
MMP28-204ENST00000615136 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
MMP28-204ENST00000615136 PI4KAP1Q8N8J0 262 aa23.81■■□□□ 1.4
MMP28-204ENST00000615136 ADCY9O60503 1353 aa23.81■■□□□ 1.4
MMP28-204ENST00000615136 OTUD7AQ8TE49 926 aaPredicted RBP23.81■■□□□ 1.4
MMP28-204ENST00000615136 C5P01031 1676 aa23.81■■□□□ 1.4
MMP28-204ENST00000615136 PLEKHM2Q8IWE5 1019 aa23.79■■□□□ 1.4
MMP28-204ENST00000615136 DBF4Q9UBU7 674 aaPredicted RBP23.79■■□□□ 1.4
MMP28-204ENST00000615136 LRRFIP2Q9Y608 721 aaKnown RBP23.79■■□□□ 1.4
MMP28-204ENST00000615136 PNMA6EA0A0J9YXQ4 647 aa23.79■■□□□ 1.4
MMP28-204ENST00000615136 GNAI3P08754 354 aa23.79■■□□□ 1.4
MMP28-204ENST00000615136 BMP2KLQ5H9B9 411 aa23.79■■□□□ 1.4
MMP28-204ENST00000615136 DCAF5Q96JK2 942 aa23.78■■□□□ 1.4
MMP28-204ENST00000615136 MRC1P22897 1456 aa23.78■■□□□ 1.4
MMP28-204ENST00000615136 BEND3Q5T5X7 828 aa23.77■■□□□ 1.4
MMP28-204ENST00000615136 DNAAF4Q8WXU2 420 aa23.77■■□□□ 1.4
MMP28-204ENST00000615136 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
MMP28-204ENST00000615136 MFAP1P55081 439 aaKnown RBP23.77■■□□□ 1.4
MMP28-204ENST00000615136 LARP1Q6PKG0 1096 aaKnown RBP23.77■■□□□ 1.4
MMP28-204ENST00000615136 SRCIN1Q9C0H9 1055 aa23.77■■□□□ 1.4
MMP28-204ENST00000615136 ZNF496Q96IT1 587 aaPredicted RBP23.76■■□□□ 1.39
MMP28-204ENST00000615136 PLEKHG2Q9H7P9 1386 aa23.76■■□□□ 1.39
MMP28-204ENST00000615136 GSPT1P15170 499 aaKnown RBP23.76■■□□□ 1.39
MMP28-204ENST00000615136 PDIA6Q15084 440 aa23.76■■□□□ 1.39
MMP28-204ENST00000615136 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms